PvulFLAVERTChr05.1081

Transcript Overview
NamePvulFLAVERTChr05.1081
Unique NamedrPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1081
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Sequence length441
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr05chromosomeChr05:45264640..45265080 +Phaseolus vulgaris cv. Flavert genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjpvfL031Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvfL032Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anpvfL0135Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL0137Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL0138Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjpvfL193Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvfL195Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvfL298Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anpvfL0909Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL0910Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL0915Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjpvfL673Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvfL683Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anpvfL1075Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL1198Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL1199Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL1423Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carpvfL045Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carpvfL056Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapvfL114Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvfL122Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvfL210Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvfL213Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carpvfL617Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carpvfL619Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carpvfL822Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapvfL800Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvfL856Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvfpvfL078Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfpvfL080Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfpvfL188Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfpvfL271Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfpvfR301Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfL094Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvfL095Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvfvrvR392Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvfvrvR395Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvpvfL233Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvfL236Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvfvfhR469Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvfhR486Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvrvR418Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvfvrvR428Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvfvssR496Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvssR503Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvuR408Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvfvuR410Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvfvuR411Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvfvssR513Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvuR422Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvfvuR427Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvpvfL458Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Cc_v2.0_23320.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vfaba.Hedin2.R1.5g008240.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_04400Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.Ca_v2.0_02777Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Vigun05g284300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_014644483.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Va05G054510.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg9852.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Phvul.005G168800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PvulFLAVERTChr05.1081drPhaVulg.Flavert.1.0gene:PvulFLAVERTChr05.1081Phaseolus vulgarisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr05.1081.1drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr05.1081.1Phaseolus vulgarisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr05.1081.1drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr05.1081.1Phaseolus vulgarisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1081drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1081Phaseolus vulgarispolypeptide
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1081drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1081-proteinPhaseolus vulgarispolypeptide


Homology
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy TrEMBL (2024)
Match: tr|V7BZU4|V7BZU4_PHAVU (Small ribosomal subunit protein uS17c OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G168800g PE=3 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 8.247e-102
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 
Query:    1 MWLLQLPSKLSTPFLNGHAHGYNLLSKPNSGVARPQWAPPSSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPSVQPSQPEELAIPFESQPQP 146
            MWLLQLPSKLSTPFLNGHAHGYNLLSKPNSGVARPQWAPPSSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPSVQPSQPEELAIPFESQPQP
Sbjct:    1 MWLLQLPSKLSTPFLNGHAHGYNLLSKPNSGVARPQWAPPSSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPSVQPSQPEELAIPFESQPQP 146
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3U1V2|A0A1S3U1V2_VIGRR (Small ribosomal subunit protein uS17c OS=Vigna radiata var. radiata OX=3916 GN=LOC106761014 PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 5.238e-77
Identity = 129/142 (90.85%), Postives = 133/142 (93.66%), Query Frame = 0 
Query:    1 MWLLQLPSKLSTPFLNGHAHGYNLLSKPNSGVARPQWAPPSSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPSVQPSQPEELAIPFES 142
            MWLLQLP KLSTPFLNGHAHG NLL+KPNSGVARPQWAPP SVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVA+HPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQR S + SQ EE+ I FES
Sbjct:    1 MWLLQLPPKLSTPFLNGHAHGSNLLTKPNSGVARPQWAPPCSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAIHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRRSNETSQREEIFIDFES 142
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SFL7|A0A0S3SFL7_PHAAN (Small ribosomal subunit protein uS17c OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G021600 PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 4.592e-76
Identity = 128/142 (90.14%), Postives = 132/142 (92.96%), Query Frame = 0 
Query:    1 MWLLQLPSKLSTPFLNGHAHGYNLLSKPNSGVARPQWAPPSSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPSVQPSQPEELAIPFES 142
            MWLLQLP KLSTPFL GH+HG NLLSKPNSGV RPQWAPP SVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVA+HPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQR S +PSQ EE+ I FES
Sbjct:    1 MWLLQLPPKLSTPFLTGHSHGSNLLSKPNSGVVRPQWAPPCSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAIHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRRSNEPSQREEIFIDFES 142
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9UP62|A0A0L9UP62_PHAAN (Small ribosomal subunit protein uS17c OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0212730 PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 4.592e-76
Identity = 128/142 (90.14%), Postives = 132/142 (92.96%), Query Frame = 0 
Query:    1 MWLLQLPSKLSTPFLNGHAHGYNLLSKPNSGVARPQWAPPSSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPSVQPSQPEELAIPFES 142
            MWLLQLP KLSTPFL GH+HG NLLSKPNSGV RPQWAPP SVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVA+HPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQR S +PSQ EE+ I FES
Sbjct:    1 MWLLQLPPKLSTPFLTGHSHGSNLLSKPNSGVVRPQWAPPCSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAIHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRRSNEPSQREEIFIDFES 142
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6N6R7|A0A4D6N6R7_VIGUN (Small ribosomal subunit protein uS17c OS=Vigna unguiculata OX=3917 GN=DEO72_LG10g187 PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.448e-69
Identity = 131/142 (92.25%), Postives = 133/142 (93.66%), Query Frame = 0 
Query:    1 MWLLQLPSKLSTPFLNGHAHGYNLLSKPNSGVARPQWAPPSSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPSVQPSQPEELAIPFES 142
            MWLLQLP KLSTPFL GHAHG NLLSKPNSGVARPQWAPP SVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQR S +PSQ EE+ I FES
Sbjct:    1 MWLLQLPPKLSTPFLTGHAHGSNLLSKPNSGVARPQWAPPCSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRRSNEPSQREEVFIDFES 142
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86SL58|A0AA86SL58_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS16024 PE=4 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 2.165e-67
Identity = 128/150 (85.33%), Postives = 137/150 (91.33%), Query Frame = 0 
Query:    1 MWLLQLPSKLSTPFLNGHAHGYNLLSKPNSGVARPQWAPPSSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPSVQPS----QPEELAIPFESQPQP 146
            MWLLQ+P KLSTPFLNGH HG+ L SKPNS +A+P WAP  SVPQIKAMKTMQGKVVCS+SDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLA+PAPQRPS +PS    QP+EL+IPFESQPQP
Sbjct:    1 MWLLQVPPKLSTPFLNGHGHGFTLFSKPNSALAQPHWAPACSVPQIKAMKTMQGKVVCSTSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLAVPAPQRPSNRPSQPDAQPDELSIPFESQPQP 150
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445IF47|A0A445IF47_GLYSO (Small ribosomal subunit protein uS17c OS=Glycine soja OX=3848 GN=D0Y65_032766 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 5.414e-63
Identity = 113/145 (77.93%), Postives = 124/145 (85.52%), Query Frame = 0 
Query:    1 MWLLQLPSKLSTPFLNGHAHGYNLLSKPNSGVARPQWAPPSSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPSVQP-SQPEELAIPFESQP 144
            MWL+QL    STPFLNGH H   LLSK +S V +  WAPPS +PQI AMKTMQG+VVCS+SDKTVAVEVVR+A HPKYKRR RKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTK FLALP P+RPS +P +QPEEL+IPFESQP
Sbjct:    1 MWLVQL----STPFLNGHGHSTTLLSKHSSAVTQTHWAPPSFLPQINAMKTMQGRVVCSTSDKTVAVEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKAFLALPVPKRPSSRPEAQPEELSIPFESQP 141
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0R0GYV0|A0A0R0GYV0_SOYBN (Small ribosomal subunit protein uS17c OS=Glycine max OX=3847 GN=100789205 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.464e-62
Identity = 113/145 (77.93%), Postives = 124/145 (85.52%), Query Frame = 0 
Query:    1 MWLLQLPSKLSTPFLNGHAHGYNLLSKPNSGVARPQWAPPSSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPSVQP-SQPEELAIPFESQP 144
            MWL+QL    STPFLNGH H   LLSK +S V +  WAPPS +PQI AMKTMQG+VVCS+SDKTVAVEVVR+A HPKYKRR RKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTK FLALP P+RPS +P +QPEEL+IPFESQP
Sbjct:   36 MWLVQL----STPFLNGHGHSTTLLSKHSSAVTQTHWAPPSFLPQINAMKTMQGRVVCSTSDKTVAVEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKAFLALPVPKRPSSRPEAQPEELSIPFESQP 176
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151QT12|A0A151QT12_CAJCA (Small ribosomal subunit protein uS17c OS=Cajanus cajan OX=3821 GN=KK1_045690 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 5.226e-62
Identity = 112/145 (77.24%), Postives = 124/145 (85.52%), Query Frame = 0 
Query:    1 MWLLQLPSKLSTPFLNGHAHGYNLLSKPNSGVARPQWAPPSSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPSVQPSQPEELAIPFESQPQ 145
            MWLLQ+P K+S+PFL G +    LL KP+ GV   QWAPP  VPQI AMK+MQGKVVCS++DKTVAVEVVR+A HPKYKRR RKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTK FLALP P+RPS +PSQ EEL+IPFESQPQ
Sbjct:    1 MWLLQVPPKMSSPFLKGSS---GLLWKPSRGVTERQWAPPCIVPQINAMKSMQGKVVCSTNDKTVAVEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKAFLALPVPKRPSNKPSQTEELSIPFESQPQ 142
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445GMJ5|A0A445GMJ5_GLYSO (Small ribosomal subunit protein uS17c OS=Glycine soja OX=3848 GN=D0Y65_039682 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 5.520e-62
Identity = 112/146 (76.71%), Postives = 124/146 (84.93%), Query Frame = 0 
Query:    1 MWLLQLPSKLSTPFLNGHAHGYNLLSKPNSGVARPQWAPPSSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPSVQPS-QPEELAIPFESQPQ 145
            MWL+QL    STPFLNGH HG +LL KP+S V +  WAPPS +PQI AMKTMQGKVVCS++DKTVAVEVVR+A HPKYKRR RKKKKYQAHDPDNQF VGDIVQLQKTRPISKTK FLALP P+R S +P  QP+EL+IPFESQPQ
Sbjct:    1 MWLVQL----STPFLNGHGHGSSLLWKPSSAVTQTHWAPPSLLPQINAMKTMQGKVVCSTNDKTVAVEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFNVGDIVQLQKTRPISKTKAFLALPVPKRSSNRPEPQPDELSIPFESQPQ 142
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy Swiss-Prot (2024)
Match: sp|P16180|RR17_ARATH (Small ribosomal subunit protein uS17c OS=Arabidopsis thaliana OX=3702 GN=RPS17 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 7.314e-50
Identity = 87/140 (62.14%), Postives = 104/140 (74.29%), Query Frame = 0 
Query:    9 KLSTPFLNGHAHG---YNLLSKPNSGVARPQWAPPSSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPS--VQPSQPEELAIPFESQ 143
            KLS+PF    AHG    + LSKPNS    P    P+ VP I+AMKTMQG+VVC++SDKTVAVEVVR+A HPKYKRR R KKKYQAHDPDNQFKVGD+V+L+K+RPISKTK+F+ALP   R +   +    E L +P ESQ
Sbjct:   14 KLSSPF----AHGSTPLSSLSKPNSF---PNHRMPALVPVIRAMKTMQGRVVCATSDKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKSRPISKTKSFVALPVIARAARKAEAGGDELLGLPLESQ 146
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy Swiss-Prot (2024)
Match: sp|P17092|RR17_PEA (Small ribosomal subunit protein uS17c (Fragment) OS=Pisum sativum OX=3888 GN=RPS17 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 7.201e-47
Identity = 79/133 (59.40%), Postives = 93/133 (69.92%), Query Frame = 0 
Query:   14 FLNGHAHGYNLLSKPNSGVARPQWAPPSS---VPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPSVQPSQPEELAIPFESQ 143
            F  G+  G N  S P   ++ PQ    +     P IKAMKTM+GKVVC+S +KTVAVEV R+A HPKY++R R KKKYQAHDP+N FKVGDIVQL KTRPISK KTFLA+PAP R S +     EL IP +SQ
Sbjct:    3 FFTGNGIGLNRFSNP---ISSPQTQTQTRSLPFPAIKAMKTMEGKVVCASGNKTVAVEVTRLAPHPKYQKRIRLKKKYQAHDPENDFKVGDIVQLLKTRPISKKKTFLAVPAPSRKSKKAGSSGELGIPLQSQ 132
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9ZST1|RR17_ORYSJ (Small ribosomal subunit protein uS17c OS=Oryza sativa subsp. japonica OX=39947 GN=RPS17 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.736e-36
Identity = 64/118 (54.24%), Postives = 85/118 (72.03%), Query Frame = 0 
Query:   10 LSTPFLNGHAHGYNLLSKPNSGVARPQWAPPSSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPS 127
            L+TPF++       +  + N G     WA  ++  +I+A K + G+VV + +DKTV VEVVR+A HPKYKRR R KKKYQAHDPDNQFKVGD+V+L+++RPISKTK FLA+P P R +
Sbjct:    3 LTTPFVSS-----PVRVQGNGGSGASPWAGAATALRIQAAKQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAHDPDNQFKVGDVVELRRSRPISKTKHFLAVPLPPRDT 115
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9TJN6|RR17_MAIZE (Small ribosomal subunit protein uS17c OS=Zea mays OX=4577 GN=RPS17 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.880e-34
Identity = 58/88 (65.91%), Postives = 72/88 (81.82%), Query Frame = 0 
Query:   45 QIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPSVQPSQ 132
            +I+A + + G+VV + +DKTV VEVVR+A HPKYKRR R KKKYQAHDPDNQFKVGD+V+LQ +RPISKTK FLA+P P R + + SQ
Sbjct:   28 RIEAARQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAHDPDNQFKVGDVVELQPSRPISKTKHFLAIPLPPRDTRRKSQ 115
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy Swiss-Prot (2024)
Match: sp|P82137|RR17_SPIOL (Small ribosomal subunit protein uS17c OS=Spinacia oleracea OX=3562 GN=RPS17 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.125e-31
Identity = 73/109 (66.97%), Postives = 85/109 (77.98%), Query Frame = 0 
Query:   42 SVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQ-------RPSVQPSQPEELAIPFESQ 143
            + P IKAM++MQGKV+C+++DKTV VEVVR+A HPKYKRR RKKKKYQAHDPDNQFKVGD VQL K RPISKTKTFLA+ AP+       RP    +  +EL IP ESQ
Sbjct:   51 TFPVIKAMRSMQGKVICATNDKTVNVEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFKVGDWVQLDKCRPISKTKTFLAV-APEGRQSSATRPKPIQAASDELGIPLESQ 158
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BLAST of PvulFLAVERTChr05.1081 vs. ExPASy Swiss-Prot (2024)
Match: sp|A9BH96|RS17_PETMO (Small ribosomal subunit protein uS17 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) OX=403833 GN=rpsQ PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.269e-18
Identity = 35/85 (41.18%), Postives = 57/85 (67.06%), Query Frame = 0 
Query:   50 KTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPSVQPSQPE 134
            K + GKVV ++ DKT+ VE  R+  HPKY +  RK ++Y AHD +N+ ++GDIV+++++R +SKTK F+ L    R ++   + E
Sbjct:    4 KIITGKVVSNAMDKTITVETDRLTKHPKYHKFVRKTRRYHAHDENNECEIGDIVEIEESRKLSKTKAFV-LKRIVRKNILSEEVE 87
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q034Z2|RS17_LACP3 (Small ribosomal subunit protein uS17 OS=Lacticaseibacillus paracasei (strain ATCC 334 / BCRC 17002 / CCUG 31169 / CIP 107868 / KCTC 3260 / NRRL B-441) OX=321967 GN=rpsQ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.545e-17
Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = 0 
Query:   50 KTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPSV 128
            K  QG+VV    DKT+ VEV  V +HP Y +R +  KKY  HD DN  K GDIV++ +TRP+S+ K F  L   ++  +
Sbjct:    8 KVYQGRVVSDKMDKTITVEVSTVKMHPVYGKRMKYSKKYYVHDEDNTAKTGDIVRIAETRPLSRNKRFRLLNIVEKAVI 86
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy Swiss-Prot (2024)
Match: sp|B3WAK8|RS17_LACCB (Small ribosomal subunit protein uS17 OS=Lacticaseibacillus casei (strain BL23) OX=543734 GN=rpsQ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.545e-17
Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = 0 
Query:   50 KTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPSV 128
            K  QG+VV    DKT+ VEV  V +HP Y +R +  KKY  HD DN  K GDIV++ +TRP+S+ K F  L   ++  +
Sbjct:    8 KVYQGRVVSDKMDKTITVEVSTVKMHPVYGKRMKYSKKYYVHDEDNTAKTGDIVRIAETRPLSRNKRFRLLNIVEKAVI 86
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q11HR1|RS17_CHESB (Small ribosomal subunit protein uS17 OS=Chelativorans sp. (strain BNC1) OX=266779 GN=rpsQ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.511e-17
Identity = 35/75 (46.67%), Postives = 49/75 (65.33%), Query Frame = 0 
Query:   50 KTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQ 124
            + +QG VV   +DKTV V V R   HP  K+  R+ K+Y+AHD +N  KVGD+V +Q+TRPISK K ++ +   Q
Sbjct:    4 RVLQGTVVSDKNDKTVVVRVERRFAHPLLKKTVRRSKRYKAHDENNMCKVGDVVLIQETRPISKDKCWVVVNENQ 78
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy Swiss-Prot (2024)
Match: sp|A6X0C7|RS17_BRUA4 (Small ribosomal subunit protein uS17 OS=Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37) OX=439375 GN=rpsQ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.553e-17
Identity = 35/71 (49.30%), Postives = 50/71 (70.42%), Query Frame = 0 
Query:   50 KTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLAL 120
            + +QG VV   +DKTV V+V R   HP  ++  R+ KKY+AHD +NQFKVGD+V +Q++ PISK K ++ L
Sbjct:    4 RVLQGVVVSDKNDKTVVVKVERRYSHPLLQKTVRQSKKYKAHDENNQFKVGDLVSIQESAPISKDKRWVVL 74
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. Araport11
Match: | (Symbols: RPS17, PDE347, CS17, PRPS17 | PIGMENT DEFECTIVE 347, PLASTID RIBOSOMAL SMALL SUBUNIT PROTEIN 17, ribosomal protein S17 | chr1:30041473-30041922 REVERSE LENGTH=149)

HSP 1 Score: 159.458 bits (402), Expect = 7.626e-51
Identity = 87/140 (62.14%), Postives = 104/140 (74.29%), Query Frame = 0 
Query:    9 KLSTPFLNGHAHG---YNLLSKPNSGVARPQWAPPSSVPQIKAMKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLALPAPQRPS--VQPSQPEELAIPFESQ 143
            KLS+PF    AHG    + LSKPNS    P    P+ VP I+AMKTMQG+VVC++SDKTVAVEVVR+A HPKYKRR R KKKYQAHDPDNQFKVGD+V+L+K+RPISKTK+F+ALP   R +   +    E L +P ESQ
Sbjct:   14 KLSSPF----AHGSTPLSSLSKPNSF---PNHRMPALVPVIRAMKTMQGRVVCATSDKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKSRPISKTKSFVALPVIARAARKAEAGGDELLGLPLESQ 146
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. Araport11
Match: | (Symbols: emb1129 | embryo defective 1129 | chr1:18283156-18283643 FORWARD LENGTH=116)

HSP 1 Score: 46.2098 bits (108), Expect = 5.107e-7
Identity = 25/71 (35.21%), Postives = 40/71 (56.34%), Query Frame = 0 
Query:   49 MKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFLA 119
            MK + G VV +   K+V V V R+  +  Y R  ++  K+ AHD  +   +GD V+L  +RP+SK K ++ 
Sbjct:    1 MKPVIGTVVSNKMQKSVVVAVDRLFHNKIYNRYVKRTSKFMAHDDKDACNIGDRVKLDPSRPLSKNKHWIV 71
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:6509588-6510069 FORWARD LENGTH=105)

HSP 1 Score: 45.4394 bits (106), Expect = 6.987e-7
Identity = 24/70 (34.29%), Postives = 39/70 (55.71%), Query Frame = 0 
Query:   49 MKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFL 118
            MK + G VV +    +V V V R+  +  Y R  ++  K+ AHD  +   +GD V+L  +RP+SK K ++
Sbjct:    1 MKAVIGTVVSNKMQMSVVVAVDRLFHNNIYNRYVKRTSKFMAHDEKDSCNIGDRVKLDPSRPLSKHKHWI 70
[Close]
BLAST of PvulFLAVERTChr05.1081 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:6509588-6510069 FORWARD LENGTH=105)

HSP 1 Score: 45.4394 bits (106), Expect = 6.987e-7
Identity = 24/70 (34.29%), Postives = 39/70 (55.71%), Query Frame = 0 
Query:   49 MKTMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKTFL 118
            MK + G VV +    +V V V R+  +  Y R  ++  K+ AHD  +   +GD V+L  +RP+SK K ++
Sbjct:    1 MKAVIGTVVSNKMQMSVVVAVDRLFHNNIYNRYVKRTSKFMAHDEKDSCNIGDRVKLDPSRPLSKHKHWI 70
The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr05.1081 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|V7BZU4|V7BZU4_PHAVU8.247e-102100.00Small ribosomal subunit protein uS17c OS=Phaseolus... [more]
tr|A0A1S3U1V2|A0A1S3U1V2_VIGRR5.238e-7790.85Small ribosomal subunit protein uS17c OS=Vigna rad... [more]
tr|A0A0S3SFL7|A0A0S3SFL7_PHAAN4.592e-7690.14Small ribosomal subunit protein uS17c OS=Vigna ang... [more]
tr|A0A0L9UP62|A0A0L9UP62_PHAAN4.592e-7690.14Small ribosomal subunit protein uS17c OS=Phaseolus... [more]
tr|A0A4D6N6R7|A0A4D6N6R7_VIGUN8.448e-6992.25Small ribosomal subunit protein uS17c OS=Vigna ung... [more]
tr|A0AA86SL58|A0AA86SL58_9FABA2.165e-6785.33Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A445IF47|A0A445IF47_GLYSO5.414e-6377.93Small ribosomal subunit protein uS17c OS=Glycine s... [more]
tr|A0A0R0GYV0|A0A0R0GYV0_SOYBN1.464e-6277.93Small ribosomal subunit protein uS17c OS=Glycine m... [more]
tr|A0A151QT12|A0A151QT12_CAJCA5.226e-6277.24Small ribosomal subunit protein uS17c OS=Cajanus c... [more]
tr|A0A445GMJ5|A0A445GMJ5_GLYSO5.520e-6276.71Small ribosomal subunit protein uS17c OS=Glycine s... [more]
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BLAST of PvulFLAVERTChr05.1081 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|P16180|RR17_ARATH7.314e-5062.14Small ribosomal subunit protein uS17c OS=Arabidops... [more]
sp|P17092|RR17_PEA7.201e-4759.40Small ribosomal subunit protein uS17c (Fragment) O... [more]
sp|Q9ZST1|RR17_ORYSJ1.736e-3654.24Small ribosomal subunit protein uS17c OS=Oryza sat... [more]
sp|Q9TJN6|RR17_MAIZE2.880e-3465.91Small ribosomal subunit protein uS17c OS=Zea mays ... [more]
sp|P82137|RR17_SPIOL1.125e-3166.97Small ribosomal subunit protein uS17c OS=Spinacia ... [more]
sp|A9BH96|RS17_PETMO4.269e-1841.18Small ribosomal subunit protein uS17 OS=Petrotoga ... [more]
sp|Q034Z2|RS17_LACP32.545e-1744.30Small ribosomal subunit protein uS17 OS=Lacticasei... [more]
sp|B3WAK8|RS17_LACCB2.545e-1744.30Small ribosomal subunit protein uS17 OS=Lacticasei... [more]
sp|Q11HR1|RS17_CHESB7.511e-1746.67Small ribosomal subunit protein uS17 OS=Chelativor... [more]
sp|A6X0C7|RS17_BRUA48.553e-1749.30Small ribosomal subunit protein uS17 OS=Brucella a... [more]
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BLAST of PvulFLAVERTChr05.1081 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11)
Total hits: 4
Match NameE-valueIdentityDescription
|7.626e-5162.14Symbols: RPS17, PDE347, CS17, PRPS17 | PIGMENT DEF... [more]
|5.107e-735.21Symbols: emb1129 | embryo defective 1129 | chr1:18... [more]
|6.987e-734.29Symbols: no symbol available | no full name availa... [more]
|6.987e-734.29Symbols: no symbol available | no full name availa... [more]
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InterPro
Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000266Small ribosomal subunit protein uS17PRINTSPR00973RIBOSOMALS17coord: 100..110
score: 53.09
coord: 110..117
score: 63.25
coord: 68..91
score: 32.5
IPR000266Small ribosomal subunit protein uS17PFAMPF00366Ribosomal_S17coord: 54..117
e-value: 4.3E-21
score: 86.1
IPR000266Small ribosomal subunit protein uS17PANTHERPTHR1074440S RIBOSOMAL PROTEIN S11 FAMILY MEMBERcoord: 45..126
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 48..137
e-value: 6.8E-25
score: 88.8
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 49..123
IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastNCBIFAMTIGR03635uS17_bactcoord: 50..117
e-value: 3.4E-22
score: 89.5
IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastHAMAPMF_01345_BRibosomal_S17_Bcoord: 49..124
score: 18.641464

Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000266Small ribosomal subunit protein uS17PRINTSPR00973RIBOSOMALS17coord: 100..110
score: 53.09
coord: 110..117
score: 63.25
coord: 68..91
score: 32.5
IPR000266Small ribosomal subunit protein uS17PFAMPF00366Ribosomal_S17coord: 54..117
e-value: 4.3E-21
score: 86.1
IPR000266Small ribosomal subunit protein uS17PANTHERPTHR1074440S RIBOSOMAL PROTEIN S11 FAMILY MEMBERcoord: 45..126
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 48..137
e-value: 6.8E-25
score: 88.8
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 49..123
IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastNCBIFAMTIGR03635uS17_bactcoord: 50..117
e-value: 3.4E-22
score: 89.5
IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastHAMAPMF_01345_BRibosomal_S17_Bcoord: 49..124
score: 18.641464

Sequences
The following sequences are available for this feature:

mRNA sequence

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1081 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1081; Name=PvulFLAVERTChr05.1081; organism=Phaseolus vulgaris; type=mRNA; length=441bp
ATGTGGCTTCTTCAGCTCCCATCGAAGCTCTCAACTCCATTTCTGAACGG
CCACGCCCATGGCTACAACCTTCTCTCAAAACCCAATTCCGGCGTGGCGA
GGCCCCAATGGGCACCCCCGTCTTCCGTGCCCCAAATAAAGGCCATGAAG
ACAATGCAGGGAAAGGTTGTGTGCTCCAGCAGCGATAAGACGGTGGCAGT
GGAGGTGGTCAGGGTGGCCGTTCACCCAAAGTACAAGAGGCGCTtcagga
agaagaagaagtaccaGGCCCACGACCCAGATAATCAATTCAAAGTGGGA
GACATTGTCCAGCTCCAGAAGACCAGGCCCATCAGCAAGACCAAGACTTT
TCTCGCCCTCCCAGCTCCCCAAAGGCCCTCCGTCCAACCCTCCCAGCCCG
AAGAGCTTGCCATTCCTTTCGAATCCCAGCCTCAGCCCTAG
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protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1081

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1081 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1081; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1081; organism=Phaseolus vulgaris; type=polypeptide; length=146bp
MWLLQLPSKLSTPFLNGHAHGYNLLSKPNSGVARPQWAPPSSVPQIKAMK
TMQGKVVCSSSDKTVAVEVVRVAVHPKYKRRFRKKKKYQAHDPDNQFKVG
DIVQLQKTRPISKTKTFLALPAPQRPSVQPSQPEELAIPFESQPQP
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mRNA from alignment at Chr05:45264640..45265080+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1081 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1081; Name=PvulFLAVERTChr05.1081; organism=Phaseolus vulgaris; type=mRNA; length=441bp; location=Sequence derived from: Chr05:45264640..45265080+ (Phaseolus vulgaris
ATGTGGCTTCTTCAGCTCCCATCGAAGCTCTCAACTCCATTTCTGAACGG
CCACGCCCATGGCTACAACCTTCTCTCAAAACCCAATTCCGGCGTGGCGA
GGCCCCAATGGGCACCCCCGTCTTCCGTGCCCCAAATAAAGGCCATGAAG
ACAATGCAGGGAAAGGTTGTGTGCTCCAGCAGCGATAAGACGGTGGCAGT
GGAGGTGGTCAGGGTGGCCGTTCACCCAAAGTACAAGAGGCGCTtcagga
agaagaagaagtaccaGGCCCACGACCCAGATAATCAATTCAAAGTGGGA
GACATTGTCCAGCTCCAGAAGACCAGGCCCATCAGCAAGACCAAGACTTT
TCTCGCCCTCCCAGCTCCCCAAAGGCCCTCCGTCCAACCCTCCCAGCCCG
AAGAGCTTGCCATTCCTTTCGAATCCCAGCCTCAGCCCTAG
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Coding sequence (CDS) from alignment at Chr05:45264640..45265080+

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1081 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr05.1081; Name=PvulFLAVERTChr05.1081; organism=Phaseolus vulgaris; type=CDS; length=441bp; location=Sequence derived from: Chr05:45264640..45265080+ (Phaseolus vulgaris
ATGTGGCTTCTTCAGCTCCCATCGAAGCTCTCAACTCCATTTCTGAACGG
CCACGCCCATGGCTACAACCTTCTCTCAAAACCCAATTCCGGCGTGGCGA
GGCCCCAATGGGCACCCCCGTCTTCCGTGCCCCAAATAAAGGCCATGAAG
ACAATGCAGGGAAAGGTTGTGTGCTCCAGCAGCGATAAGACGGTGGCAGT
GGAGGTGGTCAGGGTGGCCGTTCACCCAAAGTACAAGAGGCGCTtcagga
agaagaagaagtaccaGGCCCACGACCCAGATAATCAATTCAAAGTGGGA
GACATTGTCCAGCTCCAGAAGACCAGGCCCATCAGCAAGACCAAGACTTT
TCTCGCCCTCCCAGCTCCCCAAAGGCCCTCCGTCCAACCCTCCCAGCCCG
AAGAGCTTGCCATTCCTTTCGAATCCCAGCCTCAGCCCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000266Ribosomal_uS17
IPR012340NA-bd_OB-fold
IPR019984Ribosomal_uS17_bact/chlr
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation