PvulFLAVERTChr11.1000520

Transcript Overview
NamePvulFLAVERTChr11.1000520
Unique NamedrPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000520
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Sequence length1035
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr11chromosomeChr11:8166995..8168029 -Phaseolus vulgaris cv. Flavert genome v1.0n/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PvulFLAVERTChr11.1000520drPhaVulg.Flavert.1.0gene:PvulFLAVERTChr11.1000520Phaseolus vulgarisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000520.1drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.1000520.1Phaseolus vulgarisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000520.1drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.1000520.1Phaseolus vulgarisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000520drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000520Phaseolus vulgarispolypeptide
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000520drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000520-proteinPhaseolus vulgarispolypeptide


Homology
BLAST of PvulFLAVERTChr11.1000520 vs. ExPASy TrEMBL (2024)
Match: tr|G8DCX3|G8DCX3_PHAVU (Putative retrotransposon OS=Phaseolus vulgaris OX=3885 PE=4 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 5.715e-78
Identity = 138/343 (40.23%), Postives = 180/343 (52.48%), Query Frame = 0
Query:    2 GEEKGMWKQVLISKYGTEKDRYCNNKKYPSWWWKDLGKSCGEGEEESWFHVEIGWKVGSGDKVRFWEDAWLGTSLLSVIYPRLYSVSLDQGRRVSEVGVWEEDIRSWRLRWRRTRFQWEVEQENELLTTVDRVSLSREAKDTLSWRGDSSSMFSVKSAYERINQRSGCRPCRVFTQLWQTKAFPNVLVTTWRVLLDKLPTRAYLVRRRVTVPSLLCVMCGSENESTQHLFVTCKVAQRVWDRCLRWVGILYVQHYDLQCHFEQFCLLQINHKQNCVWKGVWAAVVRCLWEQRNIIVFKQGVVDEEEIFHLAQIKAWLWMKYIMHSFNYTLAEWHLNPIQCLVS 344
              E+G  K +L+SKYG +  +   ++K+ SWWW+DL K  GE  E  W    + WKVG G+K RFWED W+G + L   YPRL+S+SLDQG  V E                                              L W GD S  F+VKSAY+ +   +   P   F QLWQ KA PN L T WRVLLDK+PTR+ L RR V                                    W+GIL+VQH DL+ HFE F L+ +N KQN VWKG+W   VR +WEQRN+++FKQG +D EEIFH AQ+ +WLW+K  +H+FN++ ++W LNP  C+ S
Sbjct:  123 NNEEGKLKDILVSKYGVDFGQRQIHQKFQSWWWRDLSKVSGEDYEVGWVQKTLCWKVGYGNKARFWEDTWVGRNNLLSQYPRLFSLSLDQGLTVGE--------------------------------------------HVLEWGGDPSGEFTVKSAYKYLENHAPIWPEGFFKQLWQVKALPNALTTAWRVLLDKMPTRSSLSRRGV------------------------------------WMGILFVQHKDLKVHFENFHLVHLNTKQNLVWKGLWVTTVRGIWEQRNLLIFKQGKLDAEEIFHQAQLNSWLWLKNRVHNFNFSFSDWILNPELCVKS 385          
BLAST of PvulFLAVERTChr11.1000520 vs. ExPASy TrEMBL (2024)
Match: tr|G8DCX0|G8DCX0_PHAVU (Putative retrotransposon OS=Phaseolus vulgaris OX=3885 PE=4 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 7.562e-75
Identity = 136/324 (41.98%), Postives = 184/324 (56.79%), Query Frame = 0
Query:    1 MGEEKGMWKQVLISKYGTEKDRYCNNKKYPSWWWKDLGKSCGEGEEESWFHVEIGWKVGSGDKVRFWEDAWLGTSLLSVIYPRLYSVSLDQGRRVSEVGVWEEDIRSWRLRWRRTRFQWEVEQENELLTTVDRVSLSREAKDTLSWRGDSSSMFSVKSAYERINQRSGCRPCRVFTQLWQTKAFPNVLVTTWRVLLDKLPTRAYLVRRRVTVPSLLCVMCGSENESTQHLFVTCKVAQRVWDRCLRWVGILYVQHYDLQCHFEQFCLLQINHKQNCVWKGVWAAVVRCLWEQRNIIVFKQGVVDEEEIFHLAQIKAWLWMKYIM 324
            + EEKG WK +L SKY    D      K  SWWW+DL K C EG  + WF  E+GW++G GDKV+F E+ W+G+  L  ++PRLYS+SL+QG+ V E+G W +    WR+RW+R RF+WE   E +L+  +  V+L +  +D   W  +   +FSV SAYE + +        V+  LW+ KAFPNV+VT WRVLL KLPTR                                                    H DL+ HF+ F L Q ++KQN +WKGVWA V+RC+W+QRN+I F+QGVVD EEIF  AQ+K+WLWMK ++
Sbjct: 1340 VSEEKGRWKTLLESKYNLGIDSSQTPVKSQSWWWRDLSKMCKEGGGKGWFQEELGWEIGYGDKVKFSEEVWVGSVDLKSLFPRLYSLSLNQGQTVGELGEWIDSEWRWRMRWKRDRFEWESSLERDLIALLSGVTLKKNVQDIQVWGKEVPGLFSVNSAYECLAKHDRGNQSEVYKLLWKVKAFPNVVVTAWRVLLSKLPTR----------------------------------------------------HNDLRLHFQSFHLFQASNKQNKIWKGVWANVIRCIWDQRNLITFQQGVVDAEEIFQRAQLKSWLWMKTLL 1611          
BLAST of PvulFLAVERTChr11.1000520 vs. ExPASy TrEMBL (2024)
Match: tr|G8DCX5|G8DCX5_PHAVU (Putative non-LTR retroelement OS=Phaseolus vulgaris OX=3885 PE=4 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.232e-62
Identity = 97/190 (51.05%), Postives = 133/190 (70.00%), Query Frame = 0
Query:  154 FSVKSAYERINQRSGCRPCRVFTQLWQTKAFPNVLVTTWRVLLDKLPTRAYLVRRRVTVPSLLCVMCGSENESTQHLFVTCKVAQRVWDRCLRWVGILYVQHYDLQCHFEQFCLLQINHKQNCVWKGVWAAVVRCLWEQRNIIVFKQGVVDEEEIFHLAQIKAWLWMKYIMHSFNYTLAEWHLNPIQCLV 343
            +SV  AY+ + Q +       F  +W  KAFP+VL T WRVL++++PTR  L RR + + S+ CV+C  + ES QHLF+ C  A++VW  CL+W+GIL+VQH DL+ HF  F + Q + KQN V KGVWAA+VRC+W+QRN I+FKQGVVD EEIF +AQ+K+WLWMK+  +   Y+  +W LNP  C+V
Sbjct:    4 YSVNLAYKSLAQGTSDTYHAAFAYIWNAKAFPSVLTTAWRVLVNRIPTREGLSRRGIQLNSIACVLCQIKEESCQHLFIECLYAKQVWSLCLKWLGILFVQHNDLKDHFVSFHIAQASSKQNLVLKGVWAAIVRCIWDQRNTILFKQGVVDVEEIFQMAQLKSWLWMKHRAYFHTYSFVDWLLNPSSCIV 193          
BLAST of PvulFLAVERTChr11.1000520 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151RNK2|A0A151RNK2_CAJCA (Ribonuclease H protein At1g65750 family OS=Cajanus cajan OX=3821 GN=KK1_034421 PE=4 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.771e-61
Identity = 122/340 (35.88%), Postives = 171/340 (50.29%), Query Frame = 0
Query:    7 MWKQVLISKY-GTEKDRYCNNKKYPSWWWKDLGKSCGEGEEESWFHVEIGWKVGSGDKVRFWEDAWLGTSLLSVIYPRLYSVSLDQGRRVSEVGVWEEDIRSWRLRWRRTRFQWEVEQENELLTTVDRVSLSREAKDTLSWRGDSSSMFSVKSAYERINQRS-GCRPCRVFTQLWQTKAFPNVLVTTWRVLLDKLPTRAYLVRRRVTVP--SLLCVMCGSENESTQHLFVTCKVAQRVWDRCLRWVGILYVQHYDLQCHFEQFCLLQINHKQNCVWKGVWAAVVRCLWEQRNIIVFKQGVVDEEEIFHLAQIKAWLWMKYIMHSFNYTLAEWHLNPIQCL 342
            MW QVL S+Y G        + +  S WW+DL   CG  EE++WF   I W+VG G KVRFW D W+G + L+V +PRL+  S  Q   ++E+G +      W LRWRR RF+WE+  E +LL  ++    +    D+ SW  +SS MFSVKSAY+ I   S       +F  +W   A P VL   WR+L   LPT   L RR + +      C+ C  + E+T H+F TC +  RVW +CL W+         +  HF        N  +   W  VW A +  LW  RN  +F  G  ++  I     I  W W+  +  SF Y+ ++W  NP  C+
Sbjct:    1 MWAQVLQSRYRGGHNLCAQASSQKDSIWWRDLLMVCGGVEEDNWFDKLIEWRVGVGSKVRFWLDKWVGPTNLAVAFPRLFISSDQQLASIAEIGAFVNGEWVWHLRWRRNRFEWEIPLEQQLLRLINSRIFNSSQCDSWSWVAESSGMFSVKSAYQIILAESVTIEDHDIFKLIWSIPAPPKVLFFAWRLLNRGLPTVDNLARRNILLGEHESRCIFCKVDIETTTHIFCTCPMVDRVWKQCLSWLNCPAPLPRQIFDHFSFLPAPIQNESEAETWHTVWLATMWTLWRYRNKCIFDGGTFEQGSIVRDILIFCWRWLSTLKPSFAYSFSQWSSNPGPCI 340          
BLAST of PvulFLAVERTChr11.1000520 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151QUW0|A0A151QUW0_CAJCA (Ribonuclease H protein At1g65750 family OS=Cajanus cajan OX=3821 GN=KK1_045054 PE=4 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 8.981e-61
Identity = 122/344 (35.47%), Postives = 172/344 (50.00%), Query Frame = 0
Query:    3 EEKGMWKQVLISKY-GTEKDRYCNNKKYPSWWWKDLGKSCGEGEEESWFHVEIGWKVGSGDKVRFWEDAWLGTSLLSVIYPRLYSVSLDQGRRVSEVGVWEEDIRSWRLRWRRTRFQWEVEQENELLTTVDRVSLSREAKDTLSWRGDSSSMFSVKSAYERINQRS-GCRPCRVFTQLWQTKAFPNVLVTTWRVLLDKLPTRAYLVRRRVTVP--SLLCVMCGSENESTQHLFVTCKVAQRVWDRCLRWVGILYVQHYDLQCHFEQFCLLQINHKQNCVWKGVWAAVVRCLWEQRNIIVFKQGVVDEEEIFHLAQIKAWLWMKYIMHSFNYTLAEWHLNPIQCL 342
            +   MW QVL S+Y G        + +  S WW+DL   CG  EE++WF   I W+VG G KVRFW D W+G + L+V +PRL+  S  Q   ++E+G +      W LRWRR RF+WE+  E +LL  ++    +    D+ SW  +SS MFSVKSAY+ I   S       +F  +W   A P VL   WR+L   LPT   L RR + +      C+ C  + E+T H+F TC +  RVW +CL W+         +  HF        N  +   W  VW A +  LW  RN  +F  G  ++  I     I  W W+  +  SF Y+ ++W  NP  C+
Sbjct:   94 QSSSMWAQVLQSRYRGGHNLCAQASSQKDSIWWRDLLMVCGGVEEDNWFDKLIEWRVGVGSKVRFWLDKWVGPTNLAVAFPRLFISSDQQLASIAEIGAFVNGEWVWHLRWRRNRFEWEIPLEQQLLRLINSRIFNSSQCDSWSWVAESSGMFSVKSAYQIILAESVTIEDHDIFKLIWSIPAPPKVLFFAWRLLNRGLPTVDNLARRNILLGEHESRCIFCKVDIETTTHIFCTCPMVDRVWKQCLSWLNCPAPLPRQIFDHFSFLPAPIQNESEAETWHTVWLATMWTLWRYRNKCIFDGGTFEQGSIVRDILIFCWRWLSTLKPSFAYSFSQWSSNPGPCI 437          
BLAST of PvulFLAVERTChr11.1000520 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151SXX7|A0A151SXX7_CAJCA (Ribonuclease H protein At1g65750 family OS=Cajanus cajan OX=3821 GN=KK1_015104 PE=4 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.034e-60
Identity = 122/344 (35.47%), Postives = 172/344 (50.00%), Query Frame = 0
Query:    3 EEKGMWKQVLISKY-GTEKDRYCNNKKYPSWWWKDLGKSCGEGEEESWFHVEIGWKVGSGDKVRFWEDAWLGTSLLSVIYPRLYSVSLDQGRRVSEVGVWEEDIRSWRLRWRRTRFQWEVEQENELLTTVDRVSLSREAKDTLSWRGDSSSMFSVKSAYERINQRS-GCRPCRVFTQLWQTKAFPNVLVTTWRVLLDKLPTRAYLVRRRVTVP--SLLCVMCGSENESTQHLFVTCKVAQRVWDRCLRWVGILYVQHYDLQCHFEQFCLLQINHKQNCVWKGVWAAVVRCLWEQRNIIVFKQGVVDEEEIFHLAQIKAWLWMKYIMHSFNYTLAEWHLNPIQCL 342
            +   MW QVL S+Y G        + +  S WW+DL   CG  EE++WF   I W+VG G KVRFW D W+G + L+V +PRL+  S  Q   ++E+G +      W LRWRR RF+WE+  E +LL  ++    +    D+ SW  +SS MFSVKSAY+ I   S       +F  +W   A P VL   WR+L   LPT   L RR + +      C+ C  + E+T H+F TC +  RVW +CL W+         +  HF        N  +   W  VW A +  LW  RN  +F  G  ++  I     I  W W+  +  SF Y+ ++W  NP  C+
Sbjct:   60 QSSSMWAQVLQSRYRGGHNLCAQASSQKDSIWWRDLLMVCGGVEEDNWFDKLIEWRVGVGSKVRFWLDKWVGPTNLAVAFPRLFISSDQQLASIAEIGAFVNGEWVWHLRWRRNRFEWEIPLEQQLLRLINSRIFNSSQCDSWSWVAESSGMFSVKSAYQIILAESVTIEDHDIFKLIWSIPAPPKVLFFAWRLLNRGLPTVDNLARRNILLGEHESKCIFCKVDIETTTHIFCTCPMVDRVWKQCLSWLNCPAPLPRQIFDHFSFLPAPIQNESEAETWHTVWLATMWTLWRYRNKCIFVGGTFEQGSIVRDILIFCWRWLSTLKPSFAYSFSQWSSNPGPCI 403          
BLAST of PvulFLAVERTChr11.1000520 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TV75|A0A151TV75_CAJCA (Ribonuclease H protein At1g65750 family OS=Cajanus cajan OX=3821 GN=KK1_010134 PE=4 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 8.104e-59
Identity = 115/343 (33.53%), Postives = 182/343 (53.06%), Query Frame = 0
Query:    7 MWKQVLISKYGTEKD---RYCNNKKYPSWWWKDLGKSCGEGEEESWFHVEIGWKVGSGDKVRFWEDAWLGTSLLSVIYPRLYSVSLDQGRRVSEVGVWEEDIRSWRLRWRRTRFQWEVEQENELLTTVDRVSLSREAKDTLSWRGDSSSMFSVKSAYERI-NQRSGCRPCRVFTQLWQTKAFPNVLVTTWRVLLDKLPTRAYLVRRRVTVPSLLCVMCGSENESTQHLFVTCKVAQRVWDRCLRWVGILYVQHYDLQCHFEQFCLLQINHKQNC---VWKGVWAAVVRCLWEQRNIIVFKQGVVDEEEIFHLAQIKAWLWMKYIMHSFNYTLAEWHLNPIQCL 342
            +W +V+ SKYG   +       N  Y   WW+DL K CG G E+ WF   I WK+G G KVRFW D W+G   L+  YPRL+S+S  +   ++++G W ++   W+ +WRR  F+WE  Q   L+  +  V L +  +D+  W  +++ MFSV S Y  I   RSG      F Q+W+T+  P V +  WR+L   +PT   L++R +    L+CV C +E EST H+  +C +   +W + LR +       + ++ H   FC +  + +       W+ +W+A   C+W  RN  VF   + + +++       AW W+  +  SFNYT ++W +NP QC+
Sbjct:  276 LWSRVVRSKYGGCANLCSEATTNSDYI--WWRDLLKVCGSGSEDRWFDRLIKWKIGDGTKVRFWLDNWVGDECLANTYPRLFSISEQKFHLITDMGYWIQERWVWQFQWRRNWFEWERNQGQSLMDDLRNVILHKNHQDSWIWLLEATGMFSVNSTYNHITTHRSGAEMDSKFKQIWKTRVPPKVQIFVWRLLHKGIPTVENLLKRNIV---LVCVFCKTEVESTPHIICSCPLVDAIWKQWLRSIDCPAPLPHLIEQH---FCFIPASLESKSEVEKWRVIWSATSWCIWRHRNACVFDGEIFNLDKLNKEVLFFAWSWLNILHKSFNYTFSQWSINPGQCI 610          
BLAST of PvulFLAVERTChr11.1000520 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151RX45|A0A151RX45_CAJCA (Ribonuclease H protein At1g65750 family OS=Cajanus cajan OX=3821 GN=KK1_031352 PE=4 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 4.751e-58
Identity = 120/344 (34.88%), Postives = 170/344 (49.42%), Query Frame = 0
Query:    3 EEKGMWKQVLISKY-GTEKDRYCNNKKYPSWWWKDLGKSCGEGEEESWFHVEIGWKVGSGDKVRFWEDAWLGTSLLSVIYPRLYSVSLDQGRRVSEVGVWEEDIRSWRLRWRRTRFQWEVEQENELLTTVDRVSLSREAKDTLSWRGDSSSMFSVKSAYERINQRS-GCRPCRVFTQLWQTKAFPNVLVTTWRVLLDKLPTRAYLVRRRVTVP--SLLCVMCGSENESTQHLFVTCKVAQRVWDRCLRWVGILYVQHYDLQCHFEQFCLLQINHKQNCVWKGVWAAVVRCLWEQRNIIVFKQGVVDEEEIFHLAQIKAWLWMKYIMHSFNYTLAEWHLNPIQCL 342
            +   MW QVL S+Y G        + +  S WW+DL   CG  EE++WF   I W+VG G KVRFW D W+G + L+V +PRL+  S  Q   ++E+G +      W LRWRR RF+WE+  E +LL  ++    +    D+ SW  +SS MFSVKSAY+ I   S       +F  +W   A P VL   WR+L   LPT   L RR + +      C+ C  + E+T H+F TC +  RVW +CL W+         +  HF           Q   W  VW A +  LW  R+  +F  G  ++  I     I  W W+  +  SF Y+ ++W  N   C+
Sbjct:   99 QSSSMWAQVLQSRYRGGHNLCAQASSQKDSIWWRDLLMVCGGVEEDNWFDKLIEWRVGVGSKVRFWLDKWVGPTNLAVAFPRLFISSDQQLASIAEIGAFVNGEWVWHLRWRRNRFEWEIPLEQQLLRLINSRIFNSSQCDSWSWVAESSGMFSVKSAYQIILAESVTIEDHDIFKLIWSIPAPPKVLFFAWRLLNRGLPTVDNLARRNILLGEHESRCIFCKVDIETTTHIFCTCPMVDRVWKQCLSWLNCPAPLPRQIFDHFSFLPAPIKTESQAKTWHTVWLATMWTLWRYRDKWIFDSGTFEQGSIVRDILIFCWRWLSTLKPSFAYSFSQWSSNHGPCI 442          
BLAST of PvulFLAVERTChr11.1000520 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151SHT9|A0A151SHT9_CAJCA (Ribonuclease H protein At1g65750 family OS=Cajanus cajan OX=3821 GN=KK1_000540 PE=4 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.788e-55
Identity = 114/344 (33.14%), Postives = 183/344 (53.20%), Query Frame = 0
Query:    7 MWKQVLISKYGTEKDRYCN--NKKYPSWWWKDLGKSCGEGEEESWFHVEIGWKVGSGDKVRFWEDAWLGTSLLSVIYPRLYSVSLDQGRRVSEVGVWEEDIRSWRLRWRRTRFQWEVEQENELLTTVDRVSLSREAKDTLSWRGDSSSMFSVKSAYERI-NQRSGCRPCRVFTQLWQTKAFPNVLVTTWRVLLDKLPTRAYLVRRRVTVPS--LLCVMCGSENESTQHLFVTCKVAQRVWDRCLRWVGILYVQHYDLQCHFEQFCLLQINHKQNC---VWKGVWAAVVRCLWEQRNIIVFKQGVVDEEEIFHLAQIKAWLWMKYIMHSFNYTLAEWHLNPIQCL 342
            +W +V+ SKYG   +  C+       S  W+DL K CG G E+ WF   I WK+G G KVRFW D W+G   L+  Y RL+S+S  +   + ++G W ++   W+ +WRR  F+WE  QE  L+  +  V L +  +D+  W  +++ +FSV S Y  I   RSG      F ++W+T+  P V +  WR+L   +PT   L++R + + S  LLCV C +E EST H+  +C +   +W + LR +       + ++ H   FC +  + +       W+ +W+A   C+W  RN  VF   + + +++       AW W+  +  SFNYT ++W +NP QC+
Sbjct:  341 LWGRVVRSKYGGCAN-LCSEATTNSDSIRWRDLLKVCGSGSEDRWFDRLIKWKIGDGTKVRFWLDNWVGDECLTNTYHRLFSISEQKFHLIVDMGYWIQERWVWQFQWRRNWFEWERNQEQSLMDDLRNVILHKNHQDSWIWLLEATGIFSVNSTYNHITTHRSGAEMDSKFKKIWKTRVPPKVQIFVWRLLHKGIPTVENLLKRNIVLGSQELLCVFCKTEVESTPHIICSCPLVDAIWKQWLRSIDCPAPLPHLIEQH---FCFIPASLESKSEVEKWRVIWSATSWCIWRHRNACVFDGEIFNLDKLNKEVLFFAWSWLNILDKSFNYTFSQWSINPGQCI 680          
BLAST of PvulFLAVERTChr11.1000520 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2SPQ3|A0A0B2SPQ3_GLYSO (Putative ribonuclease H protein (Fragment) OS=Glycine soja OX=3848 GN=glysoja_032641 PE=4 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 4.050e-53
Identity = 107/334 (32.04%), Postives = 168/334 (50.30%), Query Frame = 0
Query:    7 MWKQVLISKYGTEKDRYCNN-KKYPSWWWKDLGKSCGEGEEESWFHVEIGWKVGSGDKVRFWEDAWLGTSL-LSVIYPRLYSVSLDQGRRVSEVGVWEEDIRSWRLRWRRTRFQWEVEQENELLTTVDRVSLSREAKDTLSWRGDSSSMFSVKSAYERI-NQRSGCRPCRVFTQLWQTKAFPNVLVTTWRVLLDKLPTRAYLVRRRVTVPSLLCVMCGSENESTQHLFVTCKVAQRVWDRCLRWVGILYVQHYDLQCHFEQFC---LLQINHKQNCVWKGVWAAVVRCLWEQRNIIVFKQGVVDEEEIFHLAQIKAWLWMKYIMHSFNYTLAEW 334
            +W ++L SKYG   D   +  K + S WWKDL K   + + +   H  + W+VG GD+VRFW+D W+G    L   Y +L+ +S  Q   +S +G + ++  SW  RWRR  F +E EQ    +  +   S+ ++ +D + W+ + + ++S KSAY  +    S  +  R F  L + K  P   + +WR+  D+LPTRA L+RR V +   +C +CG+  E   HLF  C++   +W   + W         D   HF QFC     Q NH + C+W   W A+   +W+ RN ++FK    +  ++   A   AW W+K     FN     W
Sbjct:   30 LWARLLTSKYGGLADLQSSRVKGWHSSWWKDLRKLYHQPDFQI-IHQNMTWRVGCGDRVRFWQDPWIGQGCSLQQKYHQLFFISRQQNLFISNMGNFSQNTWSWDFRWRRNLFDYENEQAIAFMEDISAFSIQQQLQDIMVWKAEPNGLYSTKSAYRLLMPTNSPGQHSRNFQILMKLKIPPRADMFSWRLFRDRLPTRANLLRRNVVLQQTMCPLCGNHQEEAGHLFFHCRMTIGLWWEFMSWTRFKGAFSTDPATHFIQFCEGFGTQRNHNRRCIW---WIALTSTIWQHRNSLLFKGTPFEPPKVLDDALFHAWSWLKVSEKGFNIPFNHW 359          
BLAST of PvulFLAVERTChr11.1000520 vs. ExPASy Swiss-Prot (2024)
Match: sp|P0C2F6|RNHX1_ARATH (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.048e-8
Identity = 63/246 (25.61%), Postives = 94/246 (38.21%), Query Frame = 0
Query:    3 EEKGMWKQVLISKYGTEKDRYCNNKKYPSWWWKDLGKSCGEGEEESWFHVEIGWKVGSGDKVRFWEDAWLGTSLLSVIYPRLYSVSLDQGRRVSEVG-VWEEDIRSWRLRWRRTRFQWEVEQENELLTTVDRVSLSREAKDTLSWRGDSSSMFSVKSAYERINQRSGCRP--CRVFTQLWQTKAFPNVLVTTWRVLLDKLPTRAYLVRRRVTVPSLLCVMCGSENESTQHLFVTCKVAQRVWDRCL 245
            E+  +W  VL  KY   + R  +    P   W    +S   G  +   H  +GW  G G ++RFW D W+    L         + LD G R ++   V  +D+      W   +          L      + L   A+D LSW+      FSV+SAYE +      RP     F  LW+ +    V    W V    + T     RR ++  S +C +C    ES  H+   C     +W R +
Sbjct:  124 EKNSLWTLVLQKKYHVGEIRD-SRWLIPKGSWSSTWRSIAIGLRDVVSH-GVGWIPGDGQQIRFWTDRWVSGKPL---------LELDNGERPTDCDTVVAKDLWIPGRGWDFAKIDPYTTNNTRLELRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSA-SNVCQVCKGGVESMLHVLRDCPAQLGIWVRVV 357          
BLAST of PvulFLAVERTChr11.1000520 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:14333528-14335255 FORWARD LENGTH=575)

HSP 1 Score: 56.6102 bits (135), Expect = 1.626e-8
Identity = 62/273 (22.71%), Postives = 112/273 (41.03%), Query Frame = 0
Query:   58 VGSGDKVRFWEDAWLGTSLLSVIYPRLYSVSLDQGRRVSEV----GVWEEDIRSWRLRWRRTRFQWEVEQENELLTTVDRVSLSREAKDTLSWRGDSSSMFSVKSAY----ERINQRSGCRPCR------VFTQLWQTKAFPNVLVTTWRVLLDKLPTRAYLVRRRVTVPSLLCVMCGSENESTQHLFVTCKVAQRVWDRCLRWVGILYVQHYDLQCHFEQFCLLQINHKQNCVWKGVWAAVVRC---LWEQRNIIVFKQGVVDEEEIFHLAQ 313
            VG+G+ +  W   WL +   S    R+  V   +   VS +     + +E  R WR       F    E E +L+  +      R   D+ +W   SS  ++VKS Y    + IN+RS  +         ++ ++W+++  P +    W+ L + LP    L  R ++  S  C+ C S  E+  HL   C  A+  W   +  + I     +    +   + +  + +  N  W+     V      LW+ RN +VF+    + +E+   A+
Sbjct:  129 VGNGEDIIIWRHKWLDSKPASAAL-RMQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEMLFP---EVERKLIGELR--PGGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKES-ACIRCPSCKETVNHLLFKCTFARLTW--AISSIPIPLGGEWADSIYVNLYWVFNLGNG-NPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAE 391          
BLAST of PvulFLAVERTChr11.1000520 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:5383597-5384226 REVERSE LENGTH=209)

HSP 1 Score: 50.8322 bits (120), Expect = 3.823e-7
Identity = 53/191 (27.75%), Postives = 84/191 (43.98%), Query Frame = 0
Query:   57 KVGSGDKVRFWEDAWLGTSLLSVIYPRLYSVSLDQGRRVSEV---GVWEEDIRS--WRLRWRRTRFQWEVEQENELLTTVDRVSLSREAKDTL-SWR-GDSSSMFSVKSAYERINQRSGCRPCRVFTQLWQTKAFPNVLVTTWRVLLDKLPTRAYLVRRRVTVPSLLCVMCGSENESTQHLFVTCKVAQRV 240
            KVGSG    FW + W  T+L  +I+     ++ D G RVS +       + +R   W +   R+R    ++     L     V+L  +A+D L  W+ G S +     SA   I+             +W     P     +W  +  +LPTR  L+   + VPSL C++C + +E+ QHLF  C  A  +
Sbjct:   28 KVGSGITCNFWSENW--TNLGPLIH-----LTGDLGPRVSGLPRNASVADALRDGVWWINGSRSRNP-IIQLLKNCLPLSSVVNLQVDAEDDLFMWKVGGSEASVGFSSAATWIHLNPVGEKVDWHKAIWFKGRIPKHAFISWVNIRHRLPTRDKLLSWGLHVPSL-CLLCNAFDETRQHLFFDCVFAGEI 209          
The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr11.1000520 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|G8DCX3|G8DCX3_PHAVU5.715e-7840.23Putative retrotransposon OS=Phaseolus vulgaris OX=... [more]
tr|G8DCX0|G8DCX0_PHAVU7.562e-7541.98Putative retrotransposon OS=Phaseolus vulgaris OX=... [more]
tr|G8DCX5|G8DCX5_PHAVU1.232e-6251.05Putative non-LTR retroelement OS=Phaseolus vulgari... [more]
tr|A0A151RNK2|A0A151RNK2_CAJCA1.771e-6135.88Ribonuclease H protein At1g65750 family OS=Cajanus... [more]
tr|A0A151QUW0|A0A151QUW0_CAJCA8.981e-6135.47Ribonuclease H protein At1g65750 family OS=Cajanus... [more]
tr|A0A151SXX7|A0A151SXX7_CAJCA1.034e-6035.47Ribonuclease H protein At1g65750 family OS=Cajanus... [more]
tr|A0A151TV75|A0A151TV75_CAJCA8.104e-5933.53Ribonuclease H protein At1g65750 family OS=Cajanus... [more]
tr|A0A151RX45|A0A151RX45_CAJCA4.751e-5834.88Ribonuclease H protein At1g65750 family OS=Cajanus... [more]
tr|A0A151SHT9|A0A151SHT9_CAJCA4.788e-5533.14Ribonuclease H protein At1g65750 family OS=Cajanus... [more]
tr|A0A0B2SPQ3|A0A0B2SPQ3_GLYSO4.050e-5332.04Putative ribonuclease H protein (Fragment) OS=Glyc... [more]
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BLAST of PvulFLAVERTChr11.1000520 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
sp|P0C2F6|RNHX1_ARATH2.048e-825.61Putative ribonuclease H protein At1g65750 OS=Arabi... [more]
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BLAST of PvulFLAVERTChr11.1000520 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
|1.626e-822.71Symbols: no symbol available | no full name availa... [more]
|3.823e-727.75Symbols: no symbol available | no full name availa... [more]
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InterPro
Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 154..241
e-value: 3.9E-16
score: 70.8
NoneNo IPR availablePANTHERPTHR36617PROTEIN, PUTATIVE-RELATEDcoord: 16..187

Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 154..241
e-value: 3.9E-16
score: 70.8
NoneNo IPR availablePANTHERPTHR36617PROTEIN, PUTATIVE-RELATEDcoord: 16..187

Sequences
The following sequences are available for this feature:

mRNA sequence

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000520 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000520; Name=PvulFLAVERTChr11.1000520; organism=Phaseolus vulgaris; type=mRNA; length=1035bp
ATGGGTGAAGAAAAAGGTATGTGGAAACAAGTTCTGATATCAAAATATGG
CACAGAGAAAGATCGATACTGCAACAATAAGAAGTACCCCTCTTGGTGGT
GGAAAGATCTAGGTAAAAGTTGTGGGgagggagaagaagaaagttggtTC
CATGTTGAAATAGGTTGGAAGGTGGGAAGCGGGGACAAAGTGAGGTTTTG
GGAGGATGCATGGTTAGGTACTAGTCTTCTAAGTGTCATATATCCAAGGC
TATATTCCGTGTCATTGGATCAAGGTAGGAGGGTGAGTGAGGTAGGTGTA
TGGGAGGAAGACATACGGAGTTggaggttgaggtggagaaggacACGGTT
CCAGTGGGAAGTGGAACAAGAGAACGAGCTGTTAACAACGGTAGATAGAG
TTAGTCTGAGCAGGGAAGCCAAGGATACCTTGAGTTGGCGTGGTGATAGC
TCAAGTATGTTTTCGGTGAAATCAGCGTATGAACGTATCAATCAACGTTC
TGGATGCAGACCTTGTCGGGTGTTTACGCAATTATGGCAGACTAAAGCCT
TCCCTAATGTGTTGGTAACAACTTGGAGGGTCCTATTAGATAAATTACCT
ACTAGAGCATACCTTGTGAGAAGACGGGTAACGGTCCCCTCACTACTGTG
CGTGATGTGTGGCAGCGAGAATGAGTCAACACAACATCTCTTTGTGACAT
GTAAAGTTGCTCAACGTGTATGGGATCGCTGTCTTAGATGGGTGGGAATA
CTGTATGTCCAACATTATGACTTGCAGTGTCACTTTGAACAATTTTGCTT
ACTCCAGATTAACCATAAACAGAATTGTGTCTGGAAAGGCGTGTGGGCAG
CGGTAGTACGGTGTCTGTGGGAGCAAAGGAATATAATTGTATTCAAACAA
GGGGTAGTTGACGAGGAAGAAATTTTCCACTTAGCTCAAATCAAAGCATG
GTTATGGATGAAATACATAATGCATTCCTTTAATTATACCCTAGCAGAAT
GGCACCTAAATCCAATCCAGTGTCTTGTGAGCTAA
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protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000520

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000520 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000520; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000520; organism=Phaseolus vulgaris; type=polypeptide; length=344bp
MGEEKGMWKQVLISKYGTEKDRYCNNKKYPSWWWKDLGKSCGEGEEESWF
HVEIGWKVGSGDKVRFWEDAWLGTSLLSVIYPRLYSVSLDQGRRVSEVGV
WEEDIRSWRLRWRRTRFQWEVEQENELLTTVDRVSLSREAKDTLSWRGDS
SSMFSVKSAYERINQRSGCRPCRVFTQLWQTKAFPNVLVTTWRVLLDKLP
TRAYLVRRRVTVPSLLCVMCGSENESTQHLFVTCKVAQRVWDRCLRWVGI
LYVQHYDLQCHFEQFCLLQINHKQNCVWKGVWAAVVRCLWEQRNIIVFKQ
GVVDEEEIFHLAQIKAWLWMKYIMHSFNYTLAEWHLNPIQCLVS
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mRNA from alignment at Chr11:8166995..8168029-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000520 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000520; Name=PvulFLAVERTChr11.1000520; organism=Phaseolus vulgaris; type=mRNA; length=1035bp; location=Sequence derived from: Chr11:8166995..8168029- (Phaseolus vulgaris
ATGGGTGAAGAAAAAGGTATGTGGAAACAAGTTCTGATATCAAAATATGG CACAGAGAAAGATCGATACTGCAACAATAAGAAGTACCCCTCTTGGTGGT GGAAAGATCTAGGTAAAAGTTGTGGGGAGGGAGAAGAAGAAAGTTGGTTC CATGTTGAAATAGGTTGGAAGGTGGGAAGCGGGGACAAAGTGAGGTTTTG GGAGGATGCATGGTTAGGTACTAGTCTTCTAAGTGTCATATATCCAAGGC TATATTCCGTGTCATTGGATCAAGGTAGGAGGGTGAGTGAGGTAGGTGTA TGGGAGGAAGACATACGGAGTTGGAGGTTGAGGTGGAGAAGGACACGGTT CCAGTGGGAAGTGGAACAAGAGAACGAGCTGTTAACAACGGTAGATAGAG TTAGTCTGAGCAGGGAAGCCAAGGATACCTTGAGTTGGCGTGGTGATAGC TCAAGTATGTTTTCGGTGAAATCAGCGTATGAACGTATCAATCAACGTTC TGGATGCAGACCTTGTCGGGTGTTTACGCAATTATGGCAGACTAAAGCCT TCCCTAATGTGTTGGTAACAACTTGGAGGGTCCTATTAGATAAATTACCT ACTAGAGCATACCTTGTGAGAAGACGGGTAACGGTCCCCTCACTACTGTG CGTGATGTGTGGCAGCGAGAATGAGTCAACACAACATCTCTTTGTGACAT GTAAAGTTGCTCAACGTGTATGGGATCGCTGTCTTAGATGGGTGGGAATA CTGTATGTCCAACATTATGACTTGCAGTGTCACTTTGAACAATTTTGCTT ACTCCAGATTAACCATAAACAGAATTGTGTCTGGAAAGGCGTGTGGGCAG CGGTAGTACGGTGTCTGTGGGAGCAAAGGAATATAATTGTATTCAAACAA GGGGTAGTTGACGAGGAAGAAATTTTCCACTTAGCTCAAATCAAAGCATG GTTATGGATGAAATACATAATGCATTCCTTTAATTATACCCTAGCAGAAT GGCACCTAAATCCAATCCAGTGTCTTGTGAGCTAA
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Coding sequence (CDS) from alignment at Chr11:8166995..8168029-

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000520 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.1000520; Name=PvulFLAVERTChr11.1000520; organism=Phaseolus vulgaris; type=CDS; length=1035bp; location=Sequence derived from: Chr11:8166995..8168029- (Phaseolus vulgaris
ATGGGTGAAGAAAAAGGTATGTGGAAACAAGTTCTGATATCAAAATATGG
CACAGAGAAAGATCGATACTGCAACAATAAGAAGTACCCCTCTTGGTGGT
GGAAAGATCTAGGTAAAAGTTGTGGGGAGGGAGAAGAAGAAAGTTGGTTC
CATGTTGAAATAGGTTGGAAGGTGGGAAGCGGGGACAAAGTGAGGTTTTG
GGAGGATGCATGGTTAGGTACTAGTCTTCTAAGTGTCATATATCCAAGGC
TATATTCCGTGTCATTGGATCAAGGTAGGAGGGTGAGTGAGGTAGGTGTA
TGGGAGGAAGACATACGGAGTTGGAGGTTGAGGTGGAGAAGGACACGGTT
CCAGTGGGAAGTGGAACAAGAGAACGAGCTGTTAACAACGGTAGATAGAG
TTAGTCTGAGCAGGGAAGCCAAGGATACCTTGAGTTGGCGTGGTGATAGC
TCAAGTATGTTTTCGGTGAAATCAGCGTATGAACGTATCAATCAACGTTC
TGGATGCAGACCTTGTCGGGTGTTTACGCAATTATGGCAGACTAAAGCCT
TCCCTAATGTGTTGGTAACAACTTGGAGGGTCCTATTAGATAAATTACCT
ACTAGAGCATACCTTGTGAGAAGACGGGTAACGGTCCCCTCACTACTGTG
CGTGATGTGTGGCAGCGAGAATGAGTCAACACAACATCTCTTTGTGACAT
GTAAAGTTGCTCAACGTGTATGGGATCGCTGTCTTAGATGGGTGGGAATA
CTGTATGTCCAACATTATGACTTGCAGTGTCACTTTGAACAATTTTGCTT
ACTCCAGATTAACCATAAACAGAATTGTGTCTGGAAAGGCGTGTGGGCAG
CGGTAGTACGGTGTCTGTGGGAGCAAAGGAATATAATTGTATTCAAACAA
GGGGTAGTTGACGAGGAAGAAATTTTCCACTTAGCTCAAATCAAAGCATG
GTTATGGATGAAATACATAATGCATTCCTTTAATTATACCCTAGCAGAAT
GGCACCTAAATCCAATCCAGTGTCTTGTGAGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR026960RVT-Znf