PvulFLAVERTChr11.625

Transcript Overview
NamePvulFLAVERTChr11.625
Unique NamedrPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.625
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Sequence length1284
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr11chromosomeChr11:12066111..12070103 +Phaseolus vulgaris cv. Flavert genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anpvfL0116Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjpvfL063Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvfL108Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anpvfL0320Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL0884Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjpvfL664Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anpvfL1117Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL1242Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL1313Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carpvfL006Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carpvfL020Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapvfL092Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pspvfL438Pisum sativum Cameor genome v1aPisum sativum
ccapvfL453Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carpvfL567Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pspvfL773Pisum sativum Cameor genome v1aPisum sativum
pspvfL784Pisum sativum Cameor genome v1aPisum sativum
ccapvfL760Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvfpvfR125Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfpvfR133Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhR131Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvfhR145Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvrvR124Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvfvrvR133Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvfvfhR188Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvfhR201Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvrvR154Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvfvssR151Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvssR154Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvssR156Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvuR141Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvpvfL121Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvfvuR161Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvfvuR165Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvpvfL444Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvpvfL485Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
jg5501.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun11g116700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.Ca_v2.0_18766Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Vfaba.Hedin2.R1.6g015840.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Va08G055970.3Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014664667.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Phvul.011G103900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PvulFLAVERTChr11.625drPhaVulg.Flavert.1.0gene:PvulFLAVERTChr11.625Phaseolus vulgarisgene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr11.625.0drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr11.625.0Phaseolus vulgarisfive_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.625.1drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.625.1Phaseolus vulgarisexon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.625.2drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.625.2Phaseolus vulgarisexon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.625.3drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.625.3Phaseolus vulgarisexon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.625.4drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.625.4Phaseolus vulgarisexon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.625.utr10drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.625.utr10Phaseolus vulgarisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.625.1drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.625.1Phaseolus vulgarisCDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.625.2drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.625.2Phaseolus vulgarisCDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.625.3drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.625.3Phaseolus vulgarisCDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.625.4drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.625.4Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr11.625.8drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr11.625.8Phaseolus vulgaristhree_prime_UTR
drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr11.625.10drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr11.625.10Phaseolus vulgaristhree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.625drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.625Phaseolus vulgarispolypeptide
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.625drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.625-proteinPhaseolus vulgarispolypeptide


Homology
[Close]
BLAST of PvulFLAVERTChr11.625 vs. ExPASy TrEMBL (2024)
Match: tr|V7AI47|V7AI47_PHAVU (Succinate dehydrogenase subunit 3 OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G103900g PE=4 SV=1)

HSP 1 Score: 503.827 bits (1296), Expect = 4.926e-180
Identity = 247/250 (98.80%), Postives = 249/250 (99.60%), Query Frame = 0 
Query:    1 MSWLLRSTKSKLLSSSSSSLSKTFPYLSRTTHYLPRNQIGLLSPLADLFRRNTASTPPAKEDASGGNLTGLPKVPANKLGCDSHAINSLMYKASGLDTTVLSGVRYGTRVCAAQNPMLSGVNTMMARSFERSMEAGTLGMIGHKRCMSDVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRL 250
            MSWLLRSTKSKLLSSSSSSLS+TFPYLSRTTHYLPRNQIGLLSPLADLFRRNTASTPPA+EDASGGNLTGLPKVPANKLGCDSHAINSLMYKASGLDTTVLSGVRYGTRVCAAQNPMLSGVNTMMARSFERSMEAGTLGMIGHKRCMSDVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGA LAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRL
Sbjct:    1 MSWLLRSTKSKLLSSSSSSLSRTFPYLSRTTHYLPRNQIGLLSPLADLFRRNTASTPPAREDASGGNLTGLPKVPANKLGCDSHAINSLMYKASGLDTTVLSGVRYGTRVCAAQNPMLSGVNTMMARSFERSMEAGTLGMIGHKRCMSDVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGALLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRL 250
[Close]
BLAST of PvulFLAVERTChr11.625 vs. ExPASy TrEMBL (2024)
Match: tr|V7B4X6|V7B4X6_PHAVU (Succinate dehydrogenase subunit 3 OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G036400g PE=4 SV=1)

HSP 1 Score: 412.92 bits (1060), Expect = 3.384e-144
Identity = 219/250 (87.60%), Postives = 231/250 (92.40%), Query Frame = 0 
Query:    1 MSWLLRSTKSKLLSSSSSSLSKTFPYLSRTTHYLPRNQIGLLSPLADLFRRNTASTPPAKEDASGGNLTGLPKVPANKLGCDSHAINSLMYKASGLDTTVLSGVRYGTRVCAAQNPMLSGVNTMMARSFERSMEAGTLGMIGHKRCMSDVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRL 250
            MSW+LRSTKSKLLSSSSSSLS+TFP LS T+H+LP NQIG LSP ADLF RNTAS P AKEDASGGNLTGLPKVPANKLGCDSH   SLMYKASGLDTTVL+G RYG R  AAQ+PML GVNT+MARSFERSMEAGT GMIGHKRCMSD+ SKT+ETN SGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIY+KMGSVSLTYDSF+QFIFYSSKLNLLVMEISALAVTYHLYSAIRHLR+
Sbjct:    1 MSWVLRSTKSKLLSSSSSSLSRTFPSLSGTSHHLPHNQIGPLSPFADLFHRNTASMPLAKEDASGGNLTGLPKVPANKLGCDSH---SLMYKASGLDTTVLAGARYGARFSAAQSPMLLGVNTVMARSFERSMEAGTFGMIGHKRCMSDIPSKTNETNPSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYIKMGSVSLTYDSFYQFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRI 247
[Close]
BLAST of PvulFLAVERTChr11.625 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0KFT3|A0A8T0KFT3_PHAAN (Succinate dehydrogenase subunit 3-1 OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0144410 PE=4 SV=1)

HSP 1 Score: 412.149 bits (1058), Expect = 8.764e-144
Identity = 213/250 (85.20%), Postives = 228/250 (91.20%), Query Frame = 0 
Query:    1 MSWLLRSTKSKLLSSSSSSLSKTFPYLSRTTHYLPRNQIGLLSPLADLFRRNTASTPPAKEDASGGNLTGLPKVPANKLGCDSHAINSLMYKASGLDTTVLSGVRYGTRVCAAQNPMLSGVNTMMARSFERSMEAGTLGMIGHKRCMSDVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRL 250
            MSW+LRSTKSK+LSSS+SS S++F  LS   H+LP N IG LSPL D F RNT  TP AKE+ASGGNLTGLP V ANK+GCDS+AINSLMYKASG DTTVLSG RYGTRVCAA NPMLSG+NT+MARSFERS+EAGTLGMIGHKRCMSDV SK SETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIY+K+GSVSLTYDSF+QFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRL
Sbjct:    1 MSWVLRSTKSKVLSSSASSFSRSFSSLSHAAHHLPHNHIGSLSPLTDRFHRNTTLTPLAKENASGGNLTGLPNVRANKIGCDSNAINSLMYKASGPDTTVLSGARYGTRVCAAHNPMLSGINTVMARSFERSIEAGTLGMIGHKRCMSDVPSKRSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYIKVGSVSLTYDSFYQFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRL 250
[Close]
BLAST of PvulFLAVERTChr11.625 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VP35|A0A1S3VP35_VIGRR (Uncharacterized protein LOC106777138 OS=Vigna radiata var. radiata OX=3916 GN=LOC106777138 PE=4 SV=1)

HSP 1 Score: 411.764 bits (1057), Expect = 1.389e-143
Identity = 217/250 (86.80%), Postives = 231/250 (92.40%), Query Frame = 0 
Query:    1 MSWLLRSTKSKLLSSSSSSLSKTFPYLSRTTHYLPRNQIGLLSPLADLFRRNTASTPPAKEDASGGNLTGLPKVPANKLGCDSHAINSLMYKASGLDTTVLSGVRYGTRVCAAQNPMLSGVNTMMARSFERSMEAGTLGMIGHKRCMSDVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRL 250
            MSW+LRSTKSKLLSSSSSSLS+TFP  SRT H+LP NQIG LSPL DLF RNTASTP AKE+ASGGN+TGLPKVPANKLGCDS+ INSLMYKASGL TTVL+G RYGTR  AAQ+PML GVNT+MARSFERSMEAGT GMIGHKRCMSDV SKT ETN SGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLA VILLFYMIY+K+GSVSLTYDSF+QFIFYSSKL+LLVMEISALAVTYHLYSAIRHLR+
Sbjct:    1 MSWVLRSTKSKLLSSSSSSLSRTFPSFSRTAHHLPHNQIGALSPLTDLFHRNTASTPLAKENASGGNVTGLPKVPANKLGCDSNPINSLMYKASGLYTTVLAGARYGTRGSAAQSPMLMGVNTVMARSFERSMEAGTFGMIGHKRCMSDVPSKTCETNPSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAAVILLFYMIYIKVGSVSLTYDSFYQFIFYSSKLHLLVMEISALAVTYHLYSAIRHLRI 250
[Close]
BLAST of PvulFLAVERTChr11.625 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SBR9|A0A0S3SBR9_PHAAN (Succinate dehydrogenase subunit 3 OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G150900 PE=4 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 2.771e-143
Identity = 217/250 (86.80%), Postives = 230/250 (92.00%), Query Frame = 0 
Query:    1 MSWLLRSTKSKLLSSSSSSLSKTFPYLSRTTHYLPRNQIGLLSPLADLFRRNTASTPPAKEDASGGNLTGLPKVPANKLGCDSHAINSLMYKASGLDTTVLSGVRYGTRVCAAQNPMLSGVNTMMARSFERSMEAGTLGMIGHKRCMSDVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRL 250
            MSW+LRSTKSKLLSSSSSSLS+TFP  SRT H LP NQIG LSPL DLF RNTASTP AKE+A GGN+TGLPKVPANKLGCDS+AI+SLMYKASGL TTVL+G RYGTR  AAQ+PML GVNT+MARSFERSMEAGT GMIGHKRCMSDV SKTSETN SGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLA VILLFYMIY+KMGSVSLTYDSF+QFIFYSSKL+L VMEISALAVTYHLYSAIRHLR+
Sbjct:    1 MSWVLRSTKSKLLSSSSSSLSRTFPSFSRTAHQLPHNQIGALSPLTDLFHRNTASTPLAKENAFGGNVTGLPKVPANKLGCDSNAIDSLMYKASGLYTTVLAGARYGTRGSAAQSPMLMGVNTVMARSFERSMEAGTFGMIGHKRCMSDVPSKTSETNPSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAAVILLFYMIYIKMGSVSLTYDSFYQFIFYSSKLHLFVMEISALAVTYHLYSAIRHLRI 250
[Close]
BLAST of PvulFLAVERTChr11.625 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9V5N3|A0A0L9V5N3_PHAAN (Succinate dehydrogenase subunit 3-1 OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0144390 PE=4 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 2.771e-143
Identity = 217/250 (86.80%), Postives = 230/250 (92.00%), Query Frame = 0 
Query:    1 MSWLLRSTKSKLLSSSSSSLSKTFPYLSRTTHYLPRNQIGLLSPLADLFRRNTASTPPAKEDASGGNLTGLPKVPANKLGCDSHAINSLMYKASGLDTTVLSGVRYGTRVCAAQNPMLSGVNTMMARSFERSMEAGTLGMIGHKRCMSDVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRL 250
            MSW+LRSTKSKLLSSSSSSLS+TFP  SRT H LP NQIG LSPL DLF RNTASTP AKE+A GGN+TGLPKVPANKLGCDS+AI+SLMYKASGL TTVL+G RYGTR  AAQ+PML GVNT+MARSFERSMEAGT GMIGHKRCMSDV SKTSETN SGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLA VILLFYMIY+KMGSVSLTYDSF+QFIFYSSKL+L VMEISALAVTYHLYSAIRHLR+
Sbjct:    1 MSWVLRSTKSKLLSSSSSSLSRTFPSFSRTAHQLPHNQIGALSPLTDLFHRNTASTPLAKENAFGGNVTGLPKVPANKLGCDSNAIDSLMYKASGLYTTVLAGARYGTRGSAAQSPMLMGVNTVMARSFERSMEAGTFGMIGHKRCMSDVPSKTSETNPSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAAVILLFYMIYIKMGSVSLTYDSFYQFIFYSSKLHLFVMEISALAVTYHLYSAIRHLRI 250
[Close]
BLAST of PvulFLAVERTChr11.625 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6LH01|A0A4D6LH01_VIGUN (Succinate dehydrogenase OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2469 PE=4 SV=1)

HSP 1 Score: 413.305 bits (1061), Expect = 1.498e-142
Identity = 216/250 (86.40%), Postives = 232/250 (92.80%), Query Frame = 0 
Query:    1 MSWLLRSTKSKLLSSSSSSLSKTFPYLSRTTHYLPRNQIGLLSPLADLFRRNTASTPPAKEDASGGNLTGLPKVPANKLGCDSHAINSLMYKASGLDTTVLSGVRYGTRVCAAQNPMLSGVNTMMARSFERSMEAGTLGMIGHKRCMSDVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRL 250
            MSW+LRSTKSKLLSSSSSSLS+TFP  SRT H+LP NQIG LSPL DLF R+TASTP AKE+ASG N+TGLPKVPANK GCDS+AINS+MYKASGLDTTVL+G RYGTRV AAQ+PML GVNT+MARSFERSMEAGT GMIGHKRCMS+V+SKTSETN SG RPLSPHLPLYQPQLSSTLSIFNRIAGAFLA VILLFYMIY+KMGSVSLTYD F+QFIFYSSKLNLLVMEISALAVTYHLYSAIRHLR+
Sbjct:  116 MSWVLRSTKSKLLSSSSSSLSRTFPSFSRTAHHLPHNQIGALSPLTDLFHRSTASTPLAKENASGENVTGLPKVPANKPGCDSNAINSMMYKASGLDTTVLAGARYGTRVSAAQSPMLMGVNTVMARSFERSMEAGTFGMIGHKRCMSNVASKTSETNPSGLRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAAVILLFYMIYIKMGSVSLTYDYFYQFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRV 365

HSP 2 Score: 69.707 bits (169), Expect = 5.658e-10
Identity = 54/89 (60.67%), Postives = 61/89 (68.54%), Query Frame = 0 
Query:    1 MSWLLRSTKSKLLSSSSSSLSKTFPYLSRTTHYLPRNQIGLLSPLADLFRRNTASTPPAKEDASGGNLTGLPKVPANKLGCDSHAINSL 89
            MSW+LRSTKSKLLSSSSSSLS+TFP  SRT H+LP NQIG LSPL DLF R+TASTP A       NL         +L C S+ I S+
Sbjct:    1 MSWVLRSTKSKLLSSSSSSLSRTFPSFSRTAHHLPHNQIGALSPLTDLFHRSTASTPLANTTEEIRNL-------EQQLRCSSYKILSV 82
[Close]
BLAST of PvulFLAVERTChr11.625 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371HWQ3|A0A371HWQ3_MUCPR (Succinate dehydrogenase subunit 3-2, mitochondrial OS=Mucuna pruriens OX=157652 GN=SDH3-2 PE=4 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 9.528e-133
Identity = 200/250 (80.00%), Postives = 218/250 (87.20%), Query Frame = 0 
Query:    1 MSWLLRSTKSKLLSSSSSSLSKTFPYLSRTTHYLPRNQIGLLSPLADLFRRNTASTPPAKEDASGGNLTGLPKVPANKLGCDSHAINSLMYKASGLDTTVLSGVRYGTRVCAAQNPMLSGVNTMMARSFERSMEAGTLGMIGHKRCMSDVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRL 250
            MS LLRSTK+KL+SSS   LS+TFP LSR  H LP  QIG LSPL DLF RNTA+ P AKE+A+G NLTGLP+ PANKLG +S+AI+S MYKASGLD +VL+G RYGT+V AAQ PML GVNT+MARSFER MEAGTLGMIGHKR MSD  SKTSETN SGFRPLSPHLP+YQPQLSSTLSI NRIAGAFLAGVILLFYMIYMK+G VSLTYDSF+QFIFYSSKLNLLVMEISALAV+YHLYSAIRHL L
Sbjct:    1 MSRLLRSTKAKLISSS---LSRTFPSLSRPNHDLP--QIGTLSPLPDLFHRNTATMPLAKENAAGRNLTGLPRDPANKLGTNSNAISSSMYKASGLDISVLAGARYGTKVWAAQGPMLLGVNTVMARSFERGMEAGTLGMIGHKRFMSDSPSKTSETNPSGFRPLSPHLPIYQPQLSSTLSICNRIAGAFLAGVILLFYMIYMKVGLVSLTYDSFYQFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL 245
[Close]
BLAST of PvulFLAVERTChr11.625 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86W6K0|A0AA86W6K0_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS31260 PE=4 SV=1)

HSP 1 Score: 381.333 bits (978), Expect = 1.216e-131
Identity = 205/252 (81.35%), Postives = 225/252 (89.29%), Query Frame = 0 
Query:    1 MSWLLRSTKSKLLSSSSSSLSKTFPYLSRT--THYLPRNQIGLLSPLADLFRRNTASTPPAKEDASGGNLTGLPKVPANKLGCDSHAINSLMYKASGLDTTVLSGVRYGTRVCAAQNPMLSGVNTMMARSFERSMEAGTLGMIGHKRCMSDVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRL 250
            MS LLRSTKSK+LSS SS  S++FP LSR   +H L  NQIG LSPL +LF RNTAS P AKE+AS G+LTGLPKVPANKLGCDS+AINS+MYKASGLDTT+ +G  YGTRVC AQ+PML GVNT+MARSFERSMEAGTLGM+GHKRCMS + SKTSET+ SGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVI+LFYMIY+KMG VSLTYDSF+QFIFYSSKLNLLVME+SALAVTYHLYS IRHLRL
Sbjct:    1 MSCLLRSTKSKILSSYSSL-SRSFPSLSRAGPSHDLLHNQIGALSPLPNLFHRNTASIPLAKENASSGDLTGLPKVPANKLGCDSNAINSVMYKASGLDTTMRAGAGYGTRVCTAQSPMLLGVNTVMARSFERSMEAGTLGMLGHKRCMSVLPSKTSETSPSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVIVLFYMIYLKMGLVSLTYDSFYQFIFYSSKLNLLVMELSALAVTYHLYSFIRHLRL 251
[Close]
BLAST of PvulFLAVERTChr11.625 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445KG42|A0A445KG42_GLYSO (Succinate dehydrogenase subunit 3-2, mitochondrial OS=Glycine soja OX=3848 GN=D0Y65_016261 PE=4 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 8.283e-127
Identity = 204/250 (81.60%), Postives = 216/250 (86.40%), Query Frame = 0 
Query:    1 MSWLLRSTKSKLLSSSSSSLSKTFPYLSRTTHYLPRNQIGLLSPLADLFRRNTASTPPAKEDASGGNLTGLPKVPANKLGCDSHAINSLMYKASGLDTTVLSGVRYGTRVCAAQNPMLSGVNTMMARSFERSMEAGTLGMIGHKRCMSDVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRL 250
            MSWLLRSTKSKLLSSSSSS S      SRT   LPR QIG +SPL DLF RNTA+ P AKE+ASGGNLTGLPKVPANKLG DS A NS  YKASGL+T VL+G RY +RV AAQ  M  GVNT+MARSFERSMEAGTLGMIGHKR MSD+ SKTSETN SGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVIL+FYMIYMK+G VSLTYDSF+QFIFYSSKLNLLVMEISALAV+YHLYSAIRHL L
Sbjct:    1 MSWLLRSTKSKLLSSSSSSSSSL----SRTFPSLPRPQIGAISPLPDLFHRNTATMPFAKENASGGNLTGLPKVPANKLGSDSDATNSPRYKASGLNTNVLAGARYVSRVWAAQGQMPLGVNTVMARSFERSMEAGTLGMIGHKRFMSDIPSKTSETNPSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILVFYMIYMKLGLVSLTYDSFYQFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL 246
[Close]
BLAST of PvulFLAVERTChr11.625 vs. ExPASy Swiss-Prot (2024)
Match: sp|P0DKI1|SDH32_ARATH (Succinate dehydrogenase subunit 3-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH3-2 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.095e-26
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 0 
Query:  121 VNTMMARSFERSMEAGTLGMIGHKRCMS----DVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYH 240
            V   + RSF R+++ GT      KR  S    D+ +   E     FRPLSPHL +YQPQ++S LSIFNRI+G +L GV    Y++Y+KMG + LTY SF+Q ++++ +   ++  ++ALA  YH
Sbjct:   85 VGAQLTRSF-RALDVGT-----SKRLFSTISGDIKTTQEEPKIKSFRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLYHTQQQLPVITSVTALAAIYH 202
[Close]
BLAST of PvulFLAVERTChr11.625 vs. ExPASy Swiss-Prot (2024)
Match: sp|P0DKI0|SDH31_ARATH (Succinate dehydrogenase subunit 3-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH3-1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.095e-26
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 0 
Query:  121 VNTMMARSFERSMEAGTLGMIGHKRCMS----DVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYH 240
            V   + RSF R+++ GT      KR  S    D+ +   E     FRPLSPHL +YQPQ++S LSIFNRI+G +L GV    Y++Y+KMG + LTY SF+Q ++++ +   ++  ++ALA  YH
Sbjct:   85 VGAQLTRSF-RALDVGT-----SKRLFSTISGDIKTTQEEPKIKSFRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLYHTQQQLPVITSVTALAAIYH 202
[Close]
BLAST of PvulFLAVERTChr11.625 vs. ExPASy Swiss-Prot (2024)
Match: sp|P35721|C560_MARPO (Succinate dehydrogenase cytochrome b560 subunit OS=Marchantia polymorpha OX=3197 GN=SDH3 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.176e-14
Identity = 42/90 (46.67%), Postives = 63/90 (70.00%), Query Frame = 0 
Query:  163 RPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKMGSVSLT----YDSFFQFIFYSSKLNLLVMEISALAVTYHLYSAIRHL 248
            RPLSPHL +Y+PQL+ST SIF+RI+GAFLA ++ LF +++ K+G +SLT    Y  FF   FY +   + ++  + LA+ YH+ + +RHL
Sbjct:    5 RPLSPHLTIYKPQLTSTFSIFHRISGAFLATMV-LFSILFFKIGDLSLTFYHFYQYFFFLTFYLNWFIISLVNFTLLALCYHMSNGVRHL 93
[Close]
BLAST of PvulFLAVERTChr11.625 vs. ExPASy Swiss-Prot (2024)
Match: sp|P80481|C560_RECAM (Succinate dehydrogenase cytochrome b560 subunit OS=Reclinomonas americana OX=48483 GN=SDH3 PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 3.524e-9
Identity = 34/90 (37.78%), Postives = 57/90 (63.33%), Query Frame = 0 
Query:  163 RPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKMGSVSLTYDSFFQFIF----YSSKLNLLVMEISALAVTYHLYSAIRHL 248
            RP+SPHL +Y+ Q+++TLSIF+RI G  LA + L F+++ +KM +  L+  +F+   +    YS  L + +     L + YHL++ +RHL
Sbjct:   21 RPISPHLTIYKLQITNTLSIFHRITGGVLA-LTLCFFILILKMLNFHLSSYAFYSIAYTLNQYSGFLFIAISFFLLLFIFYHLFAGLRHL 109
[Close]
BLAST of PvulFLAVERTChr11.625 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q4UKC1|DHSC_RICFE (Succinate dehydrogenase cytochrome b556 subunit OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=sdhC PE=3 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 6.601e-8
Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 0 
Query:  163 RPLSPHLPLYQPQLSSTLSIFNRIAGA--FLAGVILLFYMIYMKMGSVSLTYD-SFFQFIFYSSKLNLLVMEISALAVT----YHLYSAIRHL 248
            RP SPHL +Y+ Q+SSTLSI +R+ G   F A  IL +++I  K       YD ++ QF       N  +++I  +AV+    YHL + IRHL
Sbjct:   12 RPTSPHLSIYKLQISSTLSILHRMTGVALFFAVSILAWWLILSK-------YDNNYLQF------ANCCIIKICLVAVSYAWFYHLCNGIRHL 91
[Close]
BLAST of PvulFLAVERTChr11.625 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q92J99|DHSC_RICCN (Succinate dehydrogenase cytochrome b556 subunit OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) OX=272944 GN=sdhC PE=3 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 1.143e-7
Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 0 
Query:  163 RPLSPHLPLYQPQLSSTLSIFNRIAGA--FLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVT----YHLYSAIRHL 248
            RP SPHL +Y+PQ+SSTLSI  R+ G   F A  IL++++I  K       YD+      Y       +++I  +AV+    YHL + IRHL
Sbjct:   12 RPTSPHLTIYKPQISSTLSILYRMTGVALFFAVSILVWWLILSK-------YDN-----NYLQLAECCIIKICLVAVSYAWFYHLCNGIRHL 91
[Close]
BLAST of PvulFLAVERTChr11.625 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q68XP1|DHSC_RICTY (Succinate dehydrogenase cytochrome b556 subunit OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=sdhC PE=3 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 1.918e-7
Identity = 33/88 (37.50%), Postives = 50/88 (56.82%), Query Frame = 0 
Query:  163 RPLSPHLPLYQPQLSSTLSIFNRIAGA--FLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYHLYSAIRHL 248
            RP SPHL +Y+PQ+SSTLSI +R+ G   F    IL++++I  K       YD+ +  +     + + ++  S  A  YHL + IRHL
Sbjct:   12 RPTSPHLTIYKPQISSTLSILHRMTGVALFFVVSILVWWLILSK-------YDNNYLQLARCCIIKICLVAFSY-AWCYHLCNGIRHL 91
[Close]
BLAST of PvulFLAVERTChr11.625 vs. ExPASy Swiss-Prot (2024)
Match: sp|P41085|DHSC_RICPR (Succinate dehydrogenase cytochrome b556 subunit OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=sdhC PE=3 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 6.254e-7
Identity = 33/95 (34.74%), Postives = 49/95 (51.58%), Query Frame = 0 
Query:  163 RPLSPHLPLYQPQLSSTLSIFNRIAGA--FLAGVILLFYMI-------YMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYHLYSAIRHL 248
            RP SPHL +Y+PQ+SSTLSI +R+ G   F    IL++++I       Y+++ S  +             K+ L+    S     YHL + IRHL
Sbjct:   12 RPTSPHLTIYKPQISSTLSILHRMTGVALFFVVSILVWWLILSKYDNNYLQLASCCII------------KICLVAFSYSW---CYHLCNGIRHL 91
[Close]
BLAST of PvulFLAVERTChr11.625 vs. Araport11
Match: | (Symbols: SDH3-1 | succinate dehydrogenase 3-1 | chr5:2979777-2980527 FORWARD LENGTH=186)

HSP 1 Score: 103.605 bits (257), Expect = 4.200e-27
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 0 
Query:  121 VNTMMARSFERSMEAGTLGMIGHKRCMS----DVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYH 240
            V   + RSF R+++ GT      KR  S    D+ +   E     FRPLSPHL +YQPQ++S LSIFNRI+G +L GV    Y++Y+KMG + LTY SF+Q ++++ +   ++  ++ALA  YH
Sbjct:   58 VGAQLTRSF-RALDVGT-----SKRLFSTISGDIKTTQEEPKIKSFRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLYHTQQQLPVITSVTALAAIYH 175
[Close]
BLAST of PvulFLAVERTChr11.625 vs. Araport11
Match: | (Symbols: SDH3-1 | succinate dehydrogenase 3-1 | chr5:2979220-2980527 FORWARD LENGTH=213)

HSP 1 Score: 103.605 bits (257), Expect = 9.411e-27
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 0 
Query:  121 VNTMMARSFERSMEAGTLGMIGHKRCMS----DVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYH 240
            V   + RSF R+++ GT      KR  S    D+ +   E     FRPLSPHL +YQPQ++S LSIFNRI+G +L GV    Y++Y+KMG + LTY SF+Q ++++ +   ++  ++ALA  YH
Sbjct:   85 VGAQLTRSF-RALDVGT-----SKRLFSTISGDIKTTQEEPKIKSFRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLYHTQQQLPVITSVTALAAIYH 202
[Close]
BLAST of PvulFLAVERTChr11.625 vs. Araport11
Match: | (Symbols: SDH3-1 | succinate dehydrogenase 3-1 | chr5:2979220-2980527 FORWARD LENGTH=213)

HSP 1 Score: 103.605 bits (257), Expect = 9.411e-27
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 0 
Query:  121 VNTMMARSFERSMEAGTLGMIGHKRCMS----DVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYH 240
            V   + RSF R+++ GT      KR  S    D+ +   E     FRPLSPHL +YQPQ++S LSIFNRI+G +L GV    Y++Y+KMG + LTY SF+Q ++++ +   ++  ++ALA  YH
Sbjct:   85 VGAQLTRSF-RALDVGT-----SKRLFSTISGDIKTTQEEPKIKSFRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLYHTQQQLPVITSVTALAAIYH 202
[Close]
BLAST of PvulFLAVERTChr11.625 vs. Araport11
Match: | (Symbols: SDH3-2 | succinate dehydrogenase 3-2 | chr4:15556732-15558041 REVERSE LENGTH=213)

HSP 1 Score: 103.605 bits (257), Expect = 9.411e-27
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 0 
Query:  121 VNTMMARSFERSMEAGTLGMIGHKRCMS----DVSSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYH 240
            V   + RSF R+++ GT      KR  S    D+ +   E     FRPLSPHL +YQPQ++S LSIFNRI+G +L GV    Y++Y+KMG + LTY SF+Q ++++ +   ++  ++ALA  YH
Sbjct:   85 VGAQLTRSF-RALDVGT-----SKRLFSTISGDIKTTQEEPKIKSFRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLYHTQQQLPVITSVTALAAIYH 202
[Close]
BLAST of PvulFLAVERTChr11.625 vs. Araport11
Match: | (Symbols: ACO3 | aconitase 3 | chr2:2141591-2146350 FORWARD LENGTH=990)

HSP 1 Score: 52.7582 bits (125), Expect = 1.108e-7
Identity = 32/90 (35.56%), Postives = 47/90 (52.22%), Query Frame = 0 
Query:   88 SLMYKASGLDTTVLSGVRYGT---RVCAAQNPMLSGVNTMMARSFER------------------SMEAGTLGMIGHKRCMSDVSSKTSE 156
            ++ YK+SG DT +L+G  YG+   R  AA+ PML GV  ++A+SFER                    +A TLG+ GH+R    + +  SE
Sbjct:  853 AMRYKSSGEDTIILAGAEYGSGSSRDWAAKGPMLQGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERYTIHLPTDISE 942
The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr11.625 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|V7AI47|V7AI47_PHAVU4.926e-18098.80Succinate dehydrogenase subunit 3 OS=Phaseolus vul... [more]
tr|V7B4X6|V7B4X6_PHAVU3.384e-14487.60Succinate dehydrogenase subunit 3 OS=Phaseolus vul... [more]
tr|A0A8T0KFT3|A0A8T0KFT3_PHAAN8.764e-14485.20Succinate dehydrogenase subunit 3-1 OS=Phaseolus a... [more]
tr|A0A1S3VP35|A0A1S3VP35_VIGRR1.389e-14386.80Uncharacterized protein LOC106777138 OS=Vigna radi... [more]
tr|A0A0S3SBR9|A0A0S3SBR9_PHAAN2.771e-14386.80Succinate dehydrogenase subunit 3 OS=Vigna angular... [more]
tr|A0A0L9V5N3|A0A0L9V5N3_PHAAN2.771e-14386.80Succinate dehydrogenase subunit 3-1 OS=Phaseolus a... [more]
tr|A0A4D6LH01|A0A4D6LH01_VIGUN1.498e-14286.40Succinate dehydrogenase OS=Vigna unguiculata OX=39... [more]
tr|A0A371HWQ3|A0A371HWQ3_MUCPR9.528e-13380.00Succinate dehydrogenase subunit 3-2, mitochondrial... [more]
tr|A0AA86W6K0|A0AA86W6K0_9FABA1.216e-13181.35Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A445KG42|A0A445KG42_GLYSO8.283e-12781.60Succinate dehydrogenase subunit 3-2, mitochondrial... [more]
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BLAST of PvulFLAVERTChr11.625 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot)
Total hits: 8
Match NameE-valueIdentityDescription
sp|P0DKI1|SDH32_ARATH9.095e-2641.94Succinate dehydrogenase subunit 3-2, mitochondrial... [more]
sp|P0DKI0|SDH31_ARATH9.095e-2641.94Succinate dehydrogenase subunit 3-1, mitochondrial... [more]
sp|P35721|C560_MARPO2.176e-1446.67Succinate dehydrogenase cytochrome b560 subunit OS... [more]
sp|P80481|C560_RECAM3.524e-937.78Succinate dehydrogenase cytochrome b560 subunit OS... [more]
sp|Q4UKC1|DHSC_RICFE6.601e-839.78Succinate dehydrogenase cytochrome b556 subunit OS... [more]
sp|Q92J99|DHSC_RICCN1.143e-739.13Succinate dehydrogenase cytochrome b556 subunit OS... [more]
sp|Q68XP1|DHSC_RICTY1.918e-737.50Succinate dehydrogenase cytochrome b556 subunit OS... [more]
sp|P41085|DHSC_RICPR6.254e-734.74Succinate dehydrogenase cytochrome b556 subunit OS... [more]
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BLAST of PvulFLAVERTChr11.625 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11)
Total hits: 5
Match NameE-valueIdentityDescription
|4.200e-2741.94Symbols: SDH3-1 | succinate dehydrogenase 3-1 | ch... [more]
|9.411e-2741.94Symbols: SDH3-1 | succinate dehydrogenase 3-1 | ch... [more]
|9.411e-2741.94Symbols: SDH3-1 | succinate dehydrogenase 3-1 | ch... [more]
|9.411e-2741.94Symbols: SDH3-2 | succinate dehydrogenase 3-2 | ch... [more]
|1.108e-735.56Symbols: ACO3 | aconitase 3 | chr2:2141591-2146350... [more]
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InterPro
Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:1.20.1300.10:FF:000014coord: 148..249
e-value: 5.6E-53
score: 179.3
NoneNo IPR availablePIRSRPIRSR000178-1PIRSR000178-1coord: 163..248
e-value: 2.6E-17
score: 56.3
IPR034804Fumarate reductase/succinate dehydrogenase, transmembrane subunitGENE3D1.20.1300.10Fumarate reductase/succinate dehydrogenase, transmembrane subunitcoord: 144..249
e-value: 2.1E-20
score: 75.1
IPR034804Fumarate reductase/succinate dehydrogenase, transmembrane subunitSUPERFAMILY81343Fumarate reductase respiratory complex transmembrane subunitscoord: 156..248
IPR000701Succinate dehydrogenase/fumarate reductase type B, transmembrane subunitPFAMPF01127Sdh_cytcoord: 163..248
e-value: 1.3E-8
score: 46.3
IPR014314Succinate dehydrogenase, cytochrome b556 subunitPANTHERPTHR10978SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNITcoord: 110..248
IPR014314Succinate dehydrogenase, cytochrome b556 subunitCDDcd03499SQR_TypeC_SdhCcoord: 163..248
e-value: 1.3224E-18
score: 77.1899

Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:1.20.1300.10:FF:000014coord: 148..249
e-value: 5.6E-53
score: 179.3
NoneNo IPR availablePIRSRPIRSR000178-1PIRSR000178-1coord: 163..248
e-value: 2.6E-17
score: 56.3
IPR034804Fumarate reductase/succinate dehydrogenase, transmembrane subunitGENE3D1.20.1300.10Fumarate reductase/succinate dehydrogenase, transmembrane subunitcoord: 144..249
e-value: 2.1E-20
score: 75.1
IPR034804Fumarate reductase/succinate dehydrogenase, transmembrane subunitSUPERFAMILY81343Fumarate reductase respiratory complex transmembrane subunitscoord: 156..248
IPR000701Succinate dehydrogenase/fumarate reductase type B, transmembrane subunitPFAMPF01127Sdh_cytcoord: 163..248
e-value: 1.3E-8
score: 46.3
IPR014314Succinate dehydrogenase, cytochrome b556 subunitPANTHERPTHR10978SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNITcoord: 110..248
IPR014314Succinate dehydrogenase, cytochrome b556 subunitCDDcd03499SQR_TypeC_SdhCcoord: 163..248
e-value: 1.3224E-18
score: 77.1899

Sequences
The following sequences are available for this feature:

mRNA sequence

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.625 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.625; Name=PvulFLAVERTChr11.625; organism=Phaseolus vulgaris; type=mRNA; length=1284bp
ttggtactgagAGAGAGACTACGAAATTGGAGAACTTCACGTAGCCTTAG
TTAGTTCATTGCGTTGGGTCTCCACACGCTCCCCAAACCCCACTCCGTCA
CTCTCTCTTCTTCTCTGGAATCGTCATTCCTTCAATCTCCAAGAAATAAT
CAGCAGAGCAGAGCACGATGTCTTGGCTCCTCCGATCTACGAAGTCTAAG
TTgctctcttcttcctcttcttcactTTCCAAAACCTTCCCTTACCTCTC
CCGCACCACGCATTACCTCCCTCGCAATCAGATCGGACTTCTCTCTCCCC
TCGCCGATCTCTTCCGCCGCAACACAGCCTCCACGCCTCCCGCCAAGGAA
GACGCTTCTGGCGGAAACTTGACTGGTCTTCCCAAAGTTCCTGCGAATAA
GCTTGGCTGTGATTCTCATGCGATCAATTCGTTGATGTACAAAGCTTCTG
GACTGGACACCACTGTGCTGTCTGGAGTTAGATATGGCACTAGAGTTTGT
GCTGCACAGAATCCAATGCTATCGGGAGTCAATACTATGATGGCTAGAAG
TTTTGAGAGAAGTATGGAAGCTGGCACGTTGGGAATGATTGGTCATAAAC
GTTGTATGAGTGACGTCTCAAGTAAAACCAGTGAGACAAACACATCTGGT
TTTCGCCCGTTATCTCCTCATCTCCCTCTTTATCAGCCCCAACTTTCTTC
AACTCTCTcaatttttaatagaattgcTGGAGCTTTCTTAGCCGGTGTCA
TTTTGcttttttatatgatatatatGAAAATGGGTTCGGTGAGCCTCACC
TACGACTCTTTCTTCCAGTTcatattttattcttcaaaacTCAACCTCCT
TGTCATGGAGATCTCTGCCTTAGCCGTGACCTACCATCTGTATAGTGCAA
TTCGTCATTTACGCTTATGATTCGAGTCAACAACTGACACCTGAACTGTA
CGTTTGAACCCGAGGTGGAACTTTGCTCATTCAGCCTTTGGAGCATACTT
CAATTTGTCAATCATAAGGAACTCACAAAATCATGTACCCATAATTTTAC
TAGCTCGTCATCTGATTTGACATAGATAGCAAAATTGATAGCAATTTTTA
CTACGTTGGTTTGTCTTGAGAGTCGAGATAGCTAGTTAGGCAATGCTTTT
ATGagtgaaaattattttacacaAATTTGACTCTGCCTTGTTATGGACTC
TGATGTCTTGAAATTTGTGAGCAAATAAGAGGTTGTAACCCCGGAAATTT
ATATCACCCTGTACTTGTCTCTTGTGGAGGAGAC
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protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.625

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.625 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.625; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.625; organism=Phaseolus vulgaris; type=polypeptide; length=250bp
MSWLLRSTKSKLLSSSSSSLSKTFPYLSRTTHYLPRNQIGLLSPLADLFR
RNTASTPPAKEDASGGNLTGLPKVPANKLGCDSHAINSLMYKASGLDTTV
LSGVRYGTRVCAAQNPMLSGVNTMMARSFERSMEAGTLGMIGHKRCMSDV
SSKTSETNTSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYM
IYMKMGSVSLTYDSFFQFIFYSSKLNLLVMEISALAVTYHLYSAIRHLRL
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mRNA from alignment at Chr11:12066111..12070103+

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.625 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.625; Name=PvulFLAVERTChr11.625; organism=Phaseolus vulgaris; type=mRNA; length=3993bp; location=Sequence derived from: Chr11:12066111..12070103+ (Phaseolus vulgaris
ttggtactgagAGAGAGACTACGAAATTGGAGAACTTCACGTAGCCTTAG
TTAGTTCATTGCGTTGGGTCTCCACACGCTCCCCAAACCCCACTCCGTCA
CTCTCTCTTCTTCTCTGGAATCGTCATTCCTTCAATCTCCAAGAAATAAT
CAGCAGAGCAGAGCACGATGTCTTGGCTCCTCCGATCTACGAAGTCTAAG
TTgctctcttcttcctcttcttcactTTCCAAAACCTTCCCTTACCTCTC
CCGCACCACGCATTACCTCCCTCGCAATCAGATCGGACTTCTCTCTCCCC
TCGCCGATCTCTTCCGCCGCAACACAGCCTCCACGCCTCCCGGTAACTCC
CTTCGCtctcattttcttctttccatTTCCGTTATTCAACGCCTTCTATT
TTCATCCATTATTCACATCCTCTTTTATTGCGAACGACTATAGATAAGTG
TGTGAAAACCTTATAATGTGTAACCTTACAATCATATTCATAGAATATAA
GTGTCTGAAAAACTCAACTTAAAGTTGCGTTAACGCCTAAGAGAGCAAAT
AGCTCTTGACTGCTTCATTTTCTTAATTTGCGTTTCGTTGATTACGATGA
ATCTCGTGATTCCTGTTGCTCTGCAACCTTAATTTGTTTGCGCTCGCTGG
TGCCGAGTTCAATTTTCGGCTTCTGATTGTTTCATTCCTTGGATTCTAAT
GTCGTTTCAGCCAAGGAAGACGCTTCTGGCGGAAACTTGACTGGTCTTCC
CAAAGTTCCTGCGAATAAGCTTGGCTGTGATTCTCATGCGATCAATTCGT
TGGTATGCGTCTTTCCCGTCACTGTTTATGAGATTTCAAAATTTAACCAC
ACTTAATGGAGTGAAATATGTTTGCTTGTGTGAACTTGCATTTCTATATC
TCTTGTTTTCTCCCTTTAGACTGAGGGAAGCTGTCGTTGCTGATGCAACT
TTGATTTGACTAATTTAATAATCTTGCACCCCTTTTACATCGTTTTTAGT
TGCTGAAACGTTCTGAAGTTGTTAGAAGATTAGTTGGTTCTGGCCGTGCA
ATAGTAGTATGCTAGAGTTAGAAGCAAAGCTAATTTTTAACAAACTAGTC
CTGGTTACGAATGAAACTATTGGGGAGGTTTGGCAAATTTTGAAATATGG
TGTGAGAGTAAAGTTATAACTAGTTTTTTAATGTCTGAAATTGCACTAAT
TCGATCTTGTTGTGTCTGAAACTTGACTGgataataacaaatatgaattt
gaaatttgaaactgGAAGAAGGAGACGGGTagtttgatttaatttaatgG
TAGAAAGCTACGTAATGTCAGCTGGTCATTACAATGATAACCATACCTTC
AATTTCAAAACTAATTTACATCATGCCTATTTCTTGGGTTTTTGGTTCCC
TTGAcatctttttcttatatgttGACATCATTATGCTTATCATATTAAAA
GTGGTTCTGAGTAATAAATGCTGACAGTTAGTTGATGTCGAGTAGTTTAT
CCTGTGCAATTGTGGTGGGCATTGGGTCATGGCAATGACCTctacaattt
caattttttggGTTTTCTGTGTGTGGCCATGGAAGTTACTATATGGCTGC
ATTTAGTGAGTTTTCAACTTTTCATACCTTTAATAGTGGATGCAACTTGT
TAACGGGATGAAAAAGTCCTTTTGTAATTCTTAACTGTGTCATTCAGTGG
TGTTTGGCTGCTGGCCATATCACCATCCCTACCCGCCACTAATTGAATCA
ATTGTTCCAAAATGAAACACTAGTTTTCATTGAATCTTGTTTTCTGGCAC
CATCTCTAACATTCTCTAGCTTCCTGCCAACCCTGACTTCTGAAGCTATG
TTTTGTTCTCTGTGACAGTGCTCAGTGACACACTATTCTATATCCAAGAT
TGTGACTGTGGGATTTCACATGTCTTTCGTCAATGTTTTTAATTGTTCTT
TTGCCTTTTCAACTATTGTTTTGTTCTCTGTGACAGTGCTCAGTGACACT
CTATTCTATATCCAAGATTGTGACTGTGGGATTTCACATGTCTTTCGTCA
ATGTTTTAGTTGTTCTTTTGCCTTTTCAACTATTGTTATGTCTTCAATAT
TTTTAGCATTTACATTTCTTGAGCATTTCTATGCATATAATATGATTATA
TGATTCTTTATgtctattaatattattgataattttgttGTAGCAGTTTC
TTGCTGTCCCCACCATCTCTATATCCTGCTATGTGGATTGATAACTATGA
TTGTTGCTGTCATTGACAAAATAATCTTTTGCTAAATCATGTATCAGTAC
CTACTAGGTTTTGATTTccattttgttgattttttagaaaaatgtcTTTT
TATGTTCTATTGGTGATTGTATTCAGATTACTTTGCtgctaataaaatat
tatgctGTAATTTTTAGGAAATTAAGATCTAGAAAAGTAAGGACAAATTT
TCTCCCCTCAACAGGGCTAGACATTCTAAACTGTCTAAACTTTAGCATTC
TACTTTGAATTTAAATGACTGAAATTGATGTGATATGATATACTTGAGAT
TTCCAAACTTTTTTTCTATGTACGTCTCAACTATCAGGTTCTTATTTGGA
TTGATTACAGTGATTTACTATTGCTAGCATTGCAAAACTTGATGCTTTGA
CTAGGACAAATGGAGCCGGGAAGTGTTTATCTTTAGGTTTATCAGTACTA
GTACCTCTTCCTTTTAGGAAACAAGGAATATGTACTTGTCAATGTAAATC
CAGAATATAATCTTGCTCTACATATAATTTTCTTCGTTTTTCTCCCTAAT
ACAAAAGAAAACTTAACTGTTGCATACCATTACGCCCGAGAATGTGATAC
AAGTCATTAACTTAGCTCTGTTTAGTTTCTAATTCCTGTTAAATTGTTCT
TTTATGTCAGATGTACAAAGCTTCTGGACTGGACACCACTGTGCTGTCTG
GAGTTAGATATGGCACTAGAGTTTGTGCTGCACAGAATCCAATGCTATCG
GTGAGTTCCTATATTGCAAGTTATCTATAATTAAGTTGAATCAATTTGGT
TTGCTGATGATATTTTCATTCATAAGGGAGTCAATACTATGATGGCTAGA
AGTTTTGAGAGAAGTATGGAAGCTGGCACGTTGGGAATGATTGGTCATAA
ACGTTGTATGAGTGACGTCTCAAGTAAAACCAGTGAGACAAACACATCTG
GTTTTCGCCCGTTATCTCCTCATCTCCCTCTTTATCAGCCCCAACTTTCT
TCAACTCTCTcaatttttaatagaattgcTGGAGCTTTCTTAGCCGGTGT
CATTTTGcttttttatatgatatatatGAAAATGGGTTCGGTGAGCCTCA
CCTACGACTCTTTCTTCCAGTTcatattttattcttcaaaacTCAACCTC
CTTGTCATGGAGATCTCTGCCTTAGCCGTGACCTACCATCTGTATAGTGC
AATTCGTCATTTACGCTTATGATTCGAGTCAACAACTGACACCTGAACTG
TACGTTTGAACCCGAGGTAATATGTTTTATCTTGATCAATGTTCAGCTTT
TTATGGTTGCAATCATGAGAGCCAAGCGTGCTTGGTGTAGtcatatttag
attttaaaaaatatatatttggaggcccttttctttttctgacCATGAAT
GAGTGTATAACATGTATTTTTAGGTGGAACTTTGCTCATTCAGCCTTTGG
AGCATACTTCAATTTGTCAATCATAAGGAACTCACAAAATCATGTACCCA
TAATTTTACTAGCTCGTCATCTGATTTGACATAGATAGCAAAATTGATAG
CAATTTTTACTACGTTGGTTTGTCTTGAGAGTCGAGATAGCTAGTTAGGC
AATGCTTTTATGagtgaaaattattttacacaAATTTGACTCTGCCTTGT
TATGGACTCTGATGTCTTGAAATTTGTGAGCAAATAAGAGGTTGTAACCC
CGGAAATTTATATCACCCTGTACTTGTCTCTTGTGGAGGAGAC
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Coding sequence (CDS) from alignment at Chr11:12066111..12070103+

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.625 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.625; Name=PvulFLAVERTChr11.625; organism=Phaseolus vulgaris; type=CDS; length=753bp; location=Sequence derived from: Chr11:12066111..12070103+ (Phaseolus vulgaris
ATGTCTTGGCTCCTCCGATCTACGAAGTCTAAGTTgctctcttcttcctc
ttcttcactTTCCAAAACCTTCCCTTACCTCTCCCGCACCACGCATTACC
TCCCTCGCAATCAGATCGGACTTCTCTCTCCCCTCGCCGATCTCTTCCGC
CGCAACACAGCCTCCACGCCTCCCGCCAAGGAAGACGCTTCTGGCGGAAA
CTTGACTGGTCTTCCCAAAGTTCCTGCGAATAAGCTTGGCTGTGATTCTC
ATGCGATCAATTCGTTGATGTACAAAGCTTCTGGACTGGACACCACTGTG
CTGTCTGGAGTTAGATATGGCACTAGAGTTTGTGCTGCACAGAATCCAAT
GCTATCGGGAGTCAATACTATGATGGCTAGAAGTTTTGAGAGAAGTATGG
AAGCTGGCACGTTGGGAATGATTGGTCATAAACGTTGTATGAGTGACGTC
TCAAGTAAAACCAGTGAGACAAACACATCTGGTTTTCGCCCGTTATCTCC
TCATCTCCCTCTTTATCAGCCCCAACTTTCTTCAACTCTCTcaattttta
atagaattgcTGGAGCTTTCTTAGCCGGTGTCATTTTGcttttttatatg
atatatatGAAAATGGGTTCGGTGAGCCTCACCTACGACTCTTTCTTCCA
GTTcatattttattcttcaaaacTCAACCTCCTTGTCATGGAGATCTCTG
CCTTAGCCGTGACCTACCATCTGTATAGTGCAATTCGTCATTTACGCTTA
TGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR034804SQR/QFR_C/D
IPR000701SuccDH_FuR_B_TM-su
IPR014314Succ_DH_cytb556
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron transfer activity
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle