PvulFLAVERTChr11.634

Transcript Overview
NamePvulFLAVERTChr11.634
Unique NamedrPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.634
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Sequence length688
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr11chromosomeChr11:12432581..12435032 +Phaseolus vulgaris cv. Flavert genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anpvfL0116Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjpvfL063Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anpvfL0320Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL0884Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjpvfL664Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anpvfL1117Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL1242Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvfL1313Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carpvfL006Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carpvfL018Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carpvfL020Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapvfL092Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pspvfL438Pisum sativum Cameor genome v1aPisum sativum
ccapvfL453Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carpvfL567Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pspvfL784Pisum sativum Cameor genome v1aPisum sativum
pvfpvfR125Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhR145Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvrvR133Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvfvfhR201Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvfvrvR154Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvfvssR151Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvssR156Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvfvuR141Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvpvfL121Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvfvuR161Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvpvfL444Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Va05G045930.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014645277.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_014636379.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg44023.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_07212Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Cc_v2.0_23852.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vfaba.Hedin2.R1.1g057440.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.Ca_v2.0_18757Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Va08G055770.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_03102Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Psat5g264520.1Pisum sativum Cameor genome v1aPisum sativum
Vigun11g115900.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
jg5521.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun05g226200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_06517Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Cc_v2.0_09662.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr05.1000859Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Phvul.011G105100.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.005G114500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PvulFLAVERTChr11.634drPhaVulg.Flavert.1.0gene:PvulFLAVERTChr11.634Phaseolus vulgarisgene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.634.1drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.634.1Phaseolus vulgarisCDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.634.2drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.634.2Phaseolus vulgarisCDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.634.3drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.634.3Phaseolus vulgarisCDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.634.4drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.634.4Phaseolus vulgarisCDS
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.634.5drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr11.634.5Phaseolus vulgarisCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.634.1drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.634.1Phaseolus vulgarisexon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.634.2drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.634.2Phaseolus vulgarisexon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.634.3drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.634.3Phaseolus vulgarisexon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.634.4drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.634.4Phaseolus vulgarisexon
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.634.5drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr11.634.5Phaseolus vulgarisexon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr11.634.9drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr11.634.9Phaseolus vulgaristhree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.634drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.634Phaseolus vulgarispolypeptide
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.634drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.634-proteinPhaseolus vulgarispolypeptide


Homology
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy TrEMBL (2024)
Match: tr|V7AH14|V7AH14_PHAVU (RING-type domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G105100g PE=4 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 3.487e-110
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 
Query:    1 MIVVGRNVEDLNTLLLIQLEKALNKSPRVPTARERYMATLDSDVPMIPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            MIVVGRNVEDLNTLLLIQLEKALNKSPRVPTARERYMATLDSDVPMIPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct:    1 MIVVGRNVEDLNTLLLIQLEKALNKSPRVPTARERYMATLDSDVPMIPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6LIF3|A0A4D6LIF3_VIGUN (RING-box protein 1 OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2454 PE=4 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 3.465e-82
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 
Query:   37 MATLDSDVPMIPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            MATLDSDVPMIPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct:    1 MATLDSDVPMIPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 116
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA87BD61|A0AA87BD61_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS31251 PE=4 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 5.200e-82
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0 
Query:   37 MATLDSDVPMIPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            MATLDSDVPM+PAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct:    1 MATLDSDVPMVPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 116
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371E8B6|A0A371E8B6_MUCPR (RING-box protein 1a OS=Mucuna pruriens OX=157652 GN=RBX1A PE=4 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 5.200e-82
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0 
Query:   37 MATLDSDVPMIPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            MATLDSDVPM+PAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct:    1 MATLDSDVPMVPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 116
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8KWH4|A0A8B8KWH4_ABRPR (RING-box protein 1a-like OS=Abrus precatorius OX=3816 GN=LOC113858391 PE=4 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 5.200e-82
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0 
Query:   37 MATLDSDVPMIPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            MATLDSDVPM+PAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct:    1 MATLDSDVPMVPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 116
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6A4R3P7|A0A6A4R3P7_LUPAL (Putative transcription factor C2H2 family OS=Lupinus albus OX=3870 GN=Lalb_Chr01g0005601 PE=4 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 5.200e-82
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0 
Query:   37 MATLDSDVPMIPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            MATLDSDVPM+PAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct:    1 MATLDSDVPMVPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 116
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy TrEMBL (2024)
Match: tr|I1KFB5|I1KFB5_SOYBN (RING-type domain-containing protein OS=Glycine max OX=3847 GN=100789570 PE=4 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 5.200e-82
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0 
Query:   37 MATLDSDVPMIPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            MATLDSDVPM+PAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct:    1 MATLDSDVPMVPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 116
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy TrEMBL (2024)
Match: tr|Q2PYP4|Q2PYP4_ARAHY (RING-box protein OS=Arachis hypogaea OX=3818 GN=RBX1a PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 5.200e-82
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0 
Query:   37 MATLDSDVPMIPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            MATLDSDVPM+PAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct:    1 MATLDSDVPMVPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 116
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445KG25|A0A445KG25_GLYSO (RING-box protein 1a OS=Glycine soja OX=3848 GN=D0Y65_016244 PE=4 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 5.200e-82
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0 
Query:   37 MATLDSDVPMIPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            MATLDSDVPM+PAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct:    1 MATLDSDVPMVPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 116
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P4B9T3|A0A6P4B9T3_ARADU (RING-box protein 1a OS=Arachis duranensis OX=130453 GN=LOC107462077 PE=4 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 5.200e-82
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0 
Query:   37 MATLDSDVPMIPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            MATLDSDVPM+PAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct:    1 MATLDSDVPMVPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 116
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q940X7|RBX1A_ARATH (RING-box protein 1a OS=Arabidopsis thaliana OX=3702 GN=RBX1A PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 6.668e-73
Identity = 108/118 (91.53%), Postives = 110/118 (93.22%), Query Frame = 0 
Query:   37 MATLDSDVPMIPAGEPSSSAGPS--SKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            MATLDSDV MIPAGE SSS   S  +KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct:    1 MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8QG64|RBX1_SALSA (RING-box protein 1 OS=Salmo salar OX=8030 GN=rbx1 PE=2 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 3.366e-65
Identity = 94/115 (81.74%), Postives = 96/115 (83.48%), Query Frame = 0 
Query:   38 ATLDSDVPMIPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            A +D D P         SA  S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EWEFQKYGH
Sbjct:    3 AAMDVDTP---------SATNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy Swiss-Prot (2024)
Match: sp|P62878|RBX1_MOUSE (E3 ubiquitin-protein ligase RBX1 OS=Mus musculus OX=10090 GN=Rbx1 PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.687e-64
Identity = 93/115 (80.87%), Postives = 95/115 (82.61%), Query Frame = 0 
Query:   38 ATLDSDVPMIPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            A +D D P         S   S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EWEFQKYGH
Sbjct:    3 AAMDVDTP---------SGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy Swiss-Prot (2024)
Match: sp|P62877|RBX1_HUMAN (E3 ubiquitin-protein ligase RBX1 OS=Homo sapiens OX=9606 GN=RBX1 PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.687e-64
Identity = 93/115 (80.87%), Postives = 95/115 (82.61%), Query Frame = 0 
Query:   38 ATLDSDVPMIPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            A +D D P         S   S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EWEFQKYGH
Sbjct:    3 AAMDVDTP---------SGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9W5E1|RBX1A_DROME (RING-box protein 1A OS=Drosophila melanogaster OX=7227 GN=Roc1a PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.511e-63
Identity = 93/113 (82.30%), Postives = 98/113 (86.73%), Query Frame = 0 
Query:   40 LDSDVPMIPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            +D D   +P+   SSS G      KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EW+FQKYGH
Sbjct:    3 VDEDGYEVPS---SSSKGD----KKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWDFQKYGH 108
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9M2B0|RBX1B_ARATH (RING-box protein 1b OS=Arabidopsis thaliana OX=3702 GN=RBX1B PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.402e-61
Identity = 98/118 (83.05%), Postives = 103/118 (87.29%), Query Frame = 0 
Query:   37 MATLDSDVPMIPAGEPSSSAGPSSKKP--KRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            MA+L+SDV M   GE SS + PSS     KRFE+KKW+AVALWAWDIVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLD  EWEFQKYGH
Sbjct:    1 MASLNSDVIM---GESSSISVPSSSSKNSKRFELKKWSAVALWAWDIVVDNCAICRNHIMDLCIECLANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDVCEWEFQKYGH 115
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q54K33|RBX1_DICDI (RING-box protein 1 OS=Dictyostelium discoideum OX=44689 GN=rbx1 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 4.895e-60
Identity = 85/101 (84.16%), Postives = 92/101 (91.09%), Query Frame = 0 
Query:   51 EPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG 151
            E SSSA  + KK  +FE+K+WNAVALW WDIVVDNCAICRNHIMDLCIECQANQAS TSEECTVAWG+CNHAFHFHCISRWLK+RQVCPLDN +WEFQKYG
Sbjct:    5 EASSSASKTPKK--KFEVKRWNAVALWIWDIVVDNCAICRNHIMDLCIECQANQASNTSEECTVAWGICNHAFHFHCISRWLKSRQVCPLDNRDWEFQKYG 103
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q23457|RBX1_CAEEL (RING-box protein 1 OS=Caenorhabditis elegans OX=6239 GN=rbx-1 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 8.285e-58
Identity = 79/90 (87.78%), Postives = 83/90 (92.22%), Query Frame = 0 
Query:   63 PKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
             KRFE+KKW+AVALWAWDI VDNCAICRNHIMDLCIECQANQA+   +ECTVAWG CNHAFHFHCISRWLKTRQVCPLDN EWEFQKYGH
Sbjct:   21 KKRFEVKKWSAVALWAWDIQVDNCAICRNHIMDLCIECQANQAAGLKDECTVAWGNCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 110
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy Swiss-Prot (2024)
Match: sp|O13959|RBX1_SCHPO (RING-box protein pip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pip1 PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 2.230e-57
Identity = 79/93 (84.95%), Postives = 83/93 (89.25%), Query Frame = 0 
Query:   60 SKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
             +KP RFEIKKWNAVALW WDIVVDNCAICRNHIMDLCIECQAN  SA ++ECTVAWG CNHAFHFHCISRWL TR VCPLDN EWEFQ+YGH
Sbjct:   15 EQKPPRFEIKKWNAVALWQWDIVVDNCAICRNHIMDLCIECQANTDSAAAQECTVAWGTCNHAFHFHCISRWLNTRNVCPLDNREWEFQRYGH 107
[Close]
BLAST of PvulFLAVERTChr11.634 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9NHX0|RBX1B_DROME (RING-box protein 1B OS=Drosophila melanogaster OX=7227 GN=Roc1b PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 3.949e-48
Identity = 69/101 (68.32%), Postives = 81/101 (80.20%), Query Frame = 0 
Query:   51 EPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG 151
            EPS S G    + +RF +KKW A A+W WD+ VDNCAICRNHIM+LCIECQA+  +A  +ECTVAWG CNHAFH+HCI+RWLKTR VCPLDN EW +QKYG
Sbjct:   22 EPSCSGGAVQARTERFVVKKWVAHAMWGWDVAVDNCAICRNHIMNLCIECQAD-PNANQDECTVAWGECNHAFHYHCIARWLKTRLVCPLDNKEWVYQKYG 121
[Close]
BLAST of PvulFLAVERTChr11.634 vs. Araport11
Match: | (Symbols: ATRBX1, RBX1, HRT1, ROC1 | REGULATOR OF CULLINS-1, RING-BOX 1, RING-box 1 | chr5:6956905-6958221 REVERSE LENGTH=118)

HSP 1 Score: 216.853 bits (551), Expect = 6.963e-74
Identity = 108/118 (91.53%), Postives = 110/118 (93.22%), Query Frame = 0 
Query:   37 MATLDSDVPMIPAGEPSSSAGPS--SKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            MATLDSDV MIPAGE SSS   S  +KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct:    1 MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
[Close]
BLAST of PvulFLAVERTChr11.634 vs. Araport11
Match: | (Symbols: ATRBX1, RBX1, HRT1, ROC1 | REGULATOR OF CULLINS-1, RING-BOX 1, RING-box 1 | chr5:6956905-6958221 REVERSE LENGTH=136)

HSP 1 Score: 204.142 bits (518), Expect = 1.558e-68
Identity = 107/136 (78.68%), Postives = 109/136 (80.15%), Query Frame = 0 
Query:   37 MATLDSDVPMIPAGEPSSSAGPS--SKKPKRFEIKKWNAVALWAWD------------------IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            MATLDSDV MIPAGE SSS   S  +KK KRFEIKKW+AVALWAW                   IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct:    1 MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWGNLENPYTLSSIGLSMFRYIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 136
[Close]
BLAST of PvulFLAVERTChr11.634 vs. Araport11
Match: | (Symbols: ATRBX1, RBX1, HRT1, ROC1 | REGULATOR OF CULLINS-1, RING-BOX 1, RING-box 1 | chr5:6956905-6958221 REVERSE LENGTH=142)

HSP 1 Score: 203.756 bits (517), Expect = 2.970e-68
Identity = 108/142 (76.06%), Postives = 110/142 (77.46%), Query Frame = 0 
Query:   37 MATLDSDVPMIPAGEPSSSAGPS--SKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW------------------------GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            MATLDSDV MIPAGE SSS   S  +KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW                        GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct:    1 MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWEDDQNNCNKYFCILDCSMKDDHLEGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 142
[Close]
BLAST of PvulFLAVERTChr11.634 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:14929714-14930678 REVERSE LENGTH=115)

HSP 1 Score: 188.348 bits (477), Expect = 1.464e-62
Identity = 98/118 (83.05%), Postives = 103/118 (87.29%), Query Frame = 0 
Query:   37 MATLDSDVPMIPAGEPSSSAGPSSKKP--KRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 152
            MA+L+SDV M   GE SS + PSS     KRFE+KKW+AVALWAWDIVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLD  EWEFQKYGH
Sbjct:    1 MASLNSDVIM---GESSSISVPSSSSKNSKRFELKKWSAVALWAWDIVVDNCAICRNHIMDLCIECLANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDVCEWEFQKYGH 115
[Close]
BLAST of PvulFLAVERTChr11.634 vs. Araport11
Match: | (Symbols: APC11, ZGY1, ZYG1 | anaphase-promoting complex/cyclosome 11, ZYGOTE -ARREST 1 | chr3:1753961-1754802 FORWARD LENGTH=87)

HSP 1 Score: 68.5514 bits (166), Expect = 7.470e-16
Identity = 34/91 (37.36%), Postives = 49/91 (53.85%), Query Frame = 0 
Query:   62 KPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQK 149
            K K   I  W+AVA W WD   + C ICR      C +C+        ++C + WG CNHAFH HCI +W+ ++     CP+   EW+F++
Sbjct:    2 KVKILRILLWHAVASWTWDAQDETCGICRMAFDGCCPDCKL-----PGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 87
[Close]
BLAST of PvulFLAVERTChr11.634 vs. Araport11
Match: | (Symbols: APC11, ZGY1, ZYG1 | anaphase-promoting complex/cyclosome 11, ZYGOTE -ARREST 1 | chr3:1753961-1754802 FORWARD LENGTH=87)

HSP 1 Score: 68.5514 bits (166), Expect = 7.470e-16
Identity = 34/91 (37.36%), Postives = 49/91 (53.85%), Query Frame = 0 
Query:   62 KPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQK 149
            K K   I  W+AVA W WD   + C ICR      C +C+        ++C + WG CNHAFH HCI +W+ ++     CP+   EW+F++
Sbjct:    2 KVKILRILLWHAVASWTWDAQDETCGICRMAFDGCCPDCKL-----PGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 87
[Close]
BLAST of PvulFLAVERTChr11.634 vs. Araport11
Match: | (Symbols: APC11, ZGY1, ZYG1 | anaphase-promoting complex/cyclosome 11, ZYGOTE -ARREST 1 | chr3:1753961-1754802 FORWARD LENGTH=87)

HSP 1 Score: 68.5514 bits (166), Expect = 7.470e-16
Identity = 34/91 (37.36%), Postives = 49/91 (53.85%), Query Frame = 0 
Query:   62 KPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQK 149
            K K   I  W+AVA W WD   + C ICR      C +C+        ++C + WG CNHAFH HCI +W+ ++     CP+   EW+F++
Sbjct:    2 KVKILRILLWHAVASWTWDAQDETCGICRMAFDGCCPDCKL-----PGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 87
[Close]
BLAST of PvulFLAVERTChr11.634 vs. Araport11
Match: | (Symbols: APC11, ZGY1, ZYG1 | anaphase-promoting complex/cyclosome 11, ZYGOTE -ARREST 1 | chr3:1754400-1754802 FORWARD LENGTH=78)

HSP 1 Score: 66.6254 bits (161), Expect = 3.321e-15
Identity = 31/83 (37.35%), Postives = 47/83 (56.63%), Query Frame = 0 
Query:   70 KWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQK 149
            +W+AVA W WD   + C ICR      C +C+        ++C + WG CNHAFH HCI +W+ ++     CP+   EW+F++
Sbjct:    1 RWHAVASWTWDAQDETCGICRMAFDGCCPDCKL-----PGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 78
[Close]
BLAST of PvulFLAVERTChr11.634 vs. Araport11
Match: | (Symbols: APC11, ZGY1, ZYG1 | anaphase-promoting complex/cyclosome 11, ZYGOTE -ARREST 1 | chr3:1754275-1754802 FORWARD LENGTH=90)

HSP 1 Score: 67.0106 bits (162), Expect = 3.371e-15
Identity = 31/83 (37.35%), Postives = 47/83 (56.63%), Query Frame = 0 
Query:   70 KWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQK 149
            +W+AVA W WD   + C ICR      C +C+        ++C + WG CNHAFH HCI +W+ ++     CP+   EW+F++
Sbjct:   13 EWHAVASWTWDAQDETCGICRMAFDGCCPDCKL-----PGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 90
[Close]
BLAST of PvulFLAVERTChr11.634 vs. Araport11
Match: | (Symbols: APC11, ZGY1, ZYG1 | anaphase-promoting complex/cyclosome 11, ZYGOTE -ARREST 1 | chr3:1754275-1754802 FORWARD LENGTH=90)

HSP 1 Score: 67.0106 bits (162), Expect = 3.371e-15
Identity = 31/83 (37.35%), Postives = 47/83 (56.63%), Query Frame = 0 
Query:   70 KWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQK 149
            +W+AVA W WD   + C ICR      C +C+        ++C + WG CNHAFH HCI +W+ ++     CP+   EW+F++
Sbjct:   13 EWHAVASWTWDAQDETCGICRMAFDGCCPDCKL-----PGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 90
The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr11.634 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|V7AH14|V7AH14_PHAVU3.487e-110100.00RING-type domain-containing protein OS=Phaseolus v... [more]
tr|A0A4D6LIF3|A0A4D6LIF3_VIGUN3.465e-82100.00RING-box protein 1 OS=Vigna unguiculata OX=3917 GN... [more]
tr|A0AA87BD61|A0AA87BD61_9FABA5.200e-8299.14Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A371E8B6|A0A371E8B6_MUCPR5.200e-8299.14RING-box protein 1a OS=Mucuna pruriens OX=157652 G... [more]
tr|A0A8B8KWH4|A0A8B8KWH4_ABRPR5.200e-8299.14RING-box protein 1a-like OS=Abrus precatorius OX=3... [more]
tr|A0A6A4R3P7|A0A6A4R3P7_LUPAL5.200e-8299.14Putative transcription factor C2H2 family OS=Lupin... [more]
tr|I1KFB5|I1KFB5_SOYBN5.200e-8299.14RING-type domain-containing protein OS=Glycine max... [more]
tr|Q2PYP4|Q2PYP4_ARAHY5.200e-8299.14RING-box protein OS=Arachis hypogaea OX=3818 GN=RB... [more]
tr|A0A445KG25|A0A445KG25_GLYSO5.200e-8299.14RING-box protein 1a OS=Glycine soja OX=3848 GN=D0Y... [more]
tr|A0A6P4B9T3|A0A6P4B9T3_ARADU5.200e-8299.14RING-box protein 1a OS=Arachis duranensis OX=13045... [more]
back to top
BLAST of PvulFLAVERTChr11.634 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q940X7|RBX1A_ARATH6.668e-7391.53RING-box protein 1a OS=Arabidopsis thaliana OX=370... [more]
sp|Q8QG64|RBX1_SALSA3.366e-6581.74RING-box protein 1 OS=Salmo salar OX=8030 GN=rbx1 ... [more]
sp|P62878|RBX1_MOUSE1.687e-6480.87E3 ubiquitin-protein ligase RBX1 OS=Mus musculus O... [more]
sp|P62877|RBX1_HUMAN1.687e-6480.87E3 ubiquitin-protein ligase RBX1 OS=Homo sapiens O... [more]
sp|Q9W5E1|RBX1A_DROME1.511e-6382.30RING-box protein 1A OS=Drosophila melanogaster OX=... [more]
sp|Q9M2B0|RBX1B_ARATH1.402e-6183.05RING-box protein 1b OS=Arabidopsis thaliana OX=370... [more]
sp|Q54K33|RBX1_DICDI4.895e-6084.16RING-box protein 1 OS=Dictyostelium discoideum OX=... [more]
sp|Q23457|RBX1_CAEEL8.285e-5887.78RING-box protein 1 OS=Caenorhabditis elegans OX=62... [more]
sp|O13959|RBX1_SCHPO2.230e-5784.95RING-box protein pip1 OS=Schizosaccharomyces pombe... [more]
sp|Q9NHX0|RBX1B_DROME3.949e-4868.32RING-box protein 1B OS=Drosophila melanogaster OX=... [more]
back to top
BLAST of PvulFLAVERTChr11.634 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|6.963e-7491.53Symbols: ATRBX1, RBX1, HRT1, ROC1 | REGULATOR OF C... [more]
|1.558e-6878.68Symbols: ATRBX1, RBX1, HRT1, ROC1 | REGULATOR OF C... [more]
|2.970e-6876.06Symbols: ATRBX1, RBX1, HRT1, ROC1 | REGULATOR OF C... [more]
|1.464e-6283.05Symbols: no symbol available | no full name availa... [more]
|7.470e-1637.36Symbols: APC11, ZGY1, ZYG1 | anaphase-promoting co... [more]
|7.470e-1637.36Symbols: APC11, ZGY1, ZYG1 | anaphase-promoting co... [more]
|7.470e-1637.36Symbols: APC11, ZGY1, ZYG1 | anaphase-promoting co... [more]
|3.321e-1537.35Symbols: APC11, ZGY1, ZYG1 | anaphase-promoting co... [more]
|3.371e-1537.35Symbols: APC11, ZGY1, ZYG1 | anaphase-promoting co... [more]
|3.371e-1537.35Symbols: APC11, ZGY1, ZYG1 | anaphase-promoting co... [more]
back to top
InterPro
Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:3.30.40.10:FF:000010coord: 53..152
e-value: 5.7E-64
score: 214.3
NoneNo IPR availableCDDcd16485mRING-H2-C3H2C2D_RBX1coord: 84..145
e-value: 4.67691E-49
score: 150.247
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 64..149
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 54..152
e-value: 3.4E-35
score: 122.2
IPR024766Zinc finger, RING-H2-typePFAMPF12678zf-rbx1coord: 84..142
e-value: 2.3E-21
score: 87.1
IPR051031RING-box E3 Ubiquitin LigasePANTHERPTHR11210RING BOXcoord: 58..149
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 97..142
score: 9.30263

Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:3.30.40.10:FF:000010coord: 53..152
e-value: 5.7E-64
score: 214.3
NoneNo IPR availableCDDcd16485mRING-H2-C3H2C2D_RBX1coord: 84..145
e-value: 4.67691E-49
score: 150.247
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 64..149
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 54..152
e-value: 3.4E-35
score: 122.2
IPR024766Zinc finger, RING-H2-typePFAMPF12678zf-rbx1coord: 84..142
e-value: 2.3E-21
score: 87.1
IPR051031RING-box E3 Ubiquitin LigasePANTHERPTHR11210RING BOXcoord: 58..149
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 97..142
score: 9.30263

Sequences
The following sequences are available for this feature:

mRNA sequence

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.634 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.634; Name=PvulFLAVERTChr11.634; organism=Phaseolus vulgaris; type=mRNA; length=688bp
ATGATTGTTGTTGGTAGAAACGTAGAAGACCTTAATACACTATTGTTGAT
TCAATTGGAGAAAGCACTGAACAAATCACCCAGAGTTCCGACCGCGAGAG
AAAGGTACATGGCGACTCTTGATTCCGACGTGCCAATGATTCCGGCCGGC
GAGCCATCGAGCAGCGCCGGCCCGTCTTCCAAGAAGCCCAAGCGCTTCGA
GATCAAGAAGTGGAACGCCGTCGCACTCTGGGCTTGGGACATCGTTGTCG
ATAACTGTGCCATCTGCCGGAACCACATCATGGATCTCTGCATCGAGTGC
CAAGCCAACCAGGCCAGCGCAACTAGCGAAGAATGCACTGTGGCGTGGGG
AGTTTGTAATCATGCTTTTCACTTCCACTGCATTAGTCGATGGCTCAAGA
CCCGTCAAGTTTGTCCTCTAGATAACAGTGAGTGGGAGTTTCAGAAATAC
GGCCACTAGAACTTTGACGCGGTTGAGATCTCCTTGGACATTTGTACTGT
CTATCctatacttttaatatttacaacTCTATCTCTTGTTTTCTTTTGCT
TGTCTGCTGAACCTATTATGTTCAAGGAATCAGTTTGTCAAATGGAGTTT
AATATACACAGATGGTATATGTAAAGTtgattttaatgtttttgattTAT
CCGTTGCTCTATTCTTATTTGGTGGACTGCCTCTGCTG
back to top

protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.634

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.634 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.634; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.634; organism=Phaseolus vulgaris; type=polypeptide; length=152bp
MIVVGRNVEDLNTLLLIQLEKALNKSPRVPTARERYMATLDSDVPMIPAG
EPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIEC
QANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKY
GH
back to top

mRNA from alignment at Chr11:12432581..12435032+

Legend: CDSexonpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.634 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.634; Name=PvulFLAVERTChr11.634; organism=Phaseolus vulgaris; type=mRNA; length=2452bp; location=Sequence derived from: Chr11:12432581..12435032+ (Phaseolus vulgaris
ATGATTGTTGTTGGTAGAAACGTAGAAGACCTTAATACACTATTGTTGAT
TCAATTGGAGAAAGCACTGAACAAATCACCCAGAGTTCCGACCGCGAGAG
AAAGGTACATGGCGACTCTTGATTCCGACGTGCCAATGATTCCGGCCGGC
GAGCCATCGAGCAGCGCCGGCCCGTCTTCCAAGAAGCCCAAGCGCTTCGA
GATCAAGAAGTGGAACGCCGTCGCACTCTGGGCTTGGGGTATTTTGCTTT
CTCCTTAAACCCTAAATTTtcccatttttttcttctttttggggattaac
tgttttttttttcttttcgaaGACATCGTTGTCGATAACTGTGCCATCTG
CCGGAACCACATCATGGATCTCTGTAAGCGCGTTCTTTCAATCGAAAACT
GTTGTTCAATTTGAAACGATTCGTTCCGCTTTTGAAATCTTGGTCACTGA
TTTTAGGCATCGAGTGCCAAGCCAACCAGGCCAGCGCAACTAGCGAAGAA
TGCACTGTGGCGTGGGGTATGTTTCTGATAAGCTTTAATTTCTGATTTTA
TTTGAAGTAGCTTTTAGAATGCTTGATATTATCTGTTGTGTCACCTTAGG
GTTGAGGAAAGTAGATATGATTGTAggaatattataatttaaaattaaaa
taaaaacattcttTAGTTGGAGTTCTTCAATCTCTACTGCAAGGAAATGT
ATTGGAAGTTTGTTTTTACGTAAAGAGAGGGTAAGTTGTTGCTGCTGTCA
TTAATATTTGGCAAATTAAAGCATTAATATAGAATTTGACTCAAGAATCA
AAACCTTTGTCCCAAAGCAAGGTTGTTAATGGGCTGGGGGTTGTTGTTAT
GGCCTTGATCCTGAGGTAGGAGAAAAGGCGCGGTTTATTCTAGGAAGGTG
ATGCAAGCTAATCCTTTATTATATTTCCCCCCGTTTTATGTTTCTGTTCA
TCTCTTAAACTGAAGCAAATTCAGTATCTTACGTGTACTGTTGTACTACG
TGACTGCTCAATCTTGTGGCACGTCCTCTGCCTCGTTTTGCTGTGGTTAT
TTAGGTTACTAAATTAGGTATTCATCTGATCTAATTGGAAACTTCCCCCG
CCTATCTCACGAAGGACCCAAAATTATGCGGAATTTGCTAACGAAACATA
AAAACTAGCATTTTCATCATGTTTCTTCAAGCAGTTTATGATTTGAAAAG
GAAATAACCTTTTTATTGCAAGAACAATCATATTGATATTGCATAGCCCA
AAAGTTCATCAGTAAACATCTAAACCATAGGATATGGTCTTCTGCACTTT
AGAGCTAAAGGAGATACTAGCAGTTATTGCCAAGCACATCATATATTGTA
TTTAGGTTATATTTAAGGTTTGTGTACCTTCCATTTTTTAGGAGTACAGA
GATCATGAATTATTCTATACTCAATACGAGTCTATGAGATAATCACCATG
AGTTGTACCAAAAGAATGTGGCTACACCTTTTTATTCAAGTTCTTGCAGC
TTTTAAATTGACCATTGGAGTCGTTGTTTAAACTATAAGAATCAGAGTTG
TGAGTTATTATGATGACCTCCTGGCTTTTTGGTACAAAGGAGGAAATGGA
AAAGATGCCTACTAAAGAAAAGGAAAGCAAAAGAGAGAAGTGAATGAGTT
ATTATTTCTGTCTAATGGAAAAGAAGGGATGCTTCCATAGACTGTGTTAA
TAACATTGAGATGGAAATAATGGAAATACGTGTTAATAACAttgaggtgg
agaaggaatATGTTTGCCCCTTCATTTTGCCGGACAAAATATACTTTGTC
CCGACAtacattttgatatttttagaTTCTCACAATGTTGTAAACTCTCT
ACCTTTTTCTATCTCTACCTTTTTCTAATTTTGGAATAATGTTTAGTTGG
GACTTCAAAGAATAGTTTGTAGGCTATTCTTTGACAGGCTTCTGTggttt
gttaatatttttcttagttttcaCTGAATTACTCAACCTGCTGCTTTGCG
CTGGCTTATATTTTATACAGGAGTTTGTAATCATGCTTTTCACTTCCACT
GCATTAGTCGATGGCTCAAGACCCGTCAAGTTTGTCCTCTAGGTATGCAG
ACGTGATTCCTTTCATCCTCCTTTTCTTTTGGTACCTTATGGATCAAGAA
GTGCACTTCTAACTTGTGATTCTGTGCTTGTACAGATAACAGTGAGTGGG
AGTTTCAGAAATACGGCCACTAGAACTTTGACGCGGTTGAGATCTCCTTG
GACATTTGTACTGTCTATCctatacttttaatatttacaacTCTATCTCT
TGTTTTCTTTTGCTTGTCTGCTGAACCTATTATGTTCAAGGAATCAGTTT
GTCAAATGGAGTTTAATATACACAGATGGTATATGTAAAGTtgattttaa
tgtttttgattTATCCGTTGCTCTATTCTTATTTGGTGGACTGCCTCTGC
TG
back to top

Coding sequence (CDS) from alignment at Chr11:12432581..12435032+

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.634 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.634; Name=PvulFLAVERTChr11.634; organism=Phaseolus vulgaris; type=CDS; length=459bp; location=Sequence derived from: Chr11:12432581..12435032+ (Phaseolus vulgaris
ATGATTGTTGTTGGTAGAAACGTAGAAGACCTTAATACACTATTGTTGAT
TCAATTGGAGAAAGCACTGAACAAATCACCCAGAGTTCCGACCGCGAGAG
AAAGGTACATGGCGACTCTTGATTCCGACGTGCCAATGATTCCGGCCGGC
GAGCCATCGAGCAGCGCCGGCCCGTCTTCCAAGAAGCCCAAGCGCTTCGA
GATCAAGAAGTGGAACGCCGTCGCACTCTGGGCTTGGGACATCGTTGTCG
ATAACTGTGCCATCTGCCGGAACCACATCATGGATCTCTGCATCGAGTGC
CAAGCCAACCAGGCCAGCGCAACTAGCGAAGAATGCACTGTGGCGTGGGG
AGTTTGTAATCATGCTTTTCACTTCCACTGCATTAGTCGATGGCTCAAGA
CCCGTCAAGTTTGTCCTCTAGATAACAGTGAGTGGGAGTTTCAGAAATAC
GGCCACTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR024766Znf_RING_H2
IPR051031RING-box_E3_Ubiquitin_Ligase
IPR001841Znf_RING
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding