PvulFLAVERTChr11.688
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of PvulFLAVERTChr11.688 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3TI24|A0A1S3TI24_VIGRR (Uncharacterized protein LOC106755728 OS=Vigna radiata var. radiata OX=3916 GN=LOC106755728 PE=4 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.211e-56 Identity = 89/96 (92.71%), Postives = 91/96 (94.79%), Query Frame = 0 Query: 1 MASFARGAASLTRVGLSSSKTPIQLIHRRGLAGAADHHGPPKVNFWSDPMSPSKWKEEHFVIISLSGWGLLFYGGYKLFTGGKGKKEE-LVKEAAH 95 MASFARGAASLTRVGLSSSKTPIQLI RRGLAGAADHHGPPKVNFW DPMSPSKWKEEHFVIISL+GWGLL YGGYKLFTGGKGKKEE LVKEA+ Sbjct: 1 MASFARGAASLTRVGLSSSKTPIQLIQRRGLAGAADHHGPPKVNFWKDPMSPSKWKEEHFVIISLAGWGLLVYGGYKLFTGGKGKKEENLVKEASQ 96
BLAST of PvulFLAVERTChr11.688 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SBL4|A0A0S3SBL4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G138200 PE=4 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.727e-56 Identity = 85/90 (94.44%), Postives = 88/90 (97.78%), Query Frame = 0 Query: 1 MASFARGAASLTRVGLSSSKTPIQLIHRRGLAGAADHHGPPKVNFWSDPMSPSKWKEEHFVIISLSGWGLLFYGGYKLFTGGKGKKEELV 90 MASFARGAASLTRVGLS+SKTPIQLIHRRGLAGAADHHGPPKVNFW DPMSPSKWKEEHFVIISLSGWGLL YGGYKLFTGGKGKKEE++ Sbjct: 1 MASFARGAASLTRVGLSASKTPIQLIHRRGLAGAADHHGPPKVNFWKDPMSPSKWKEEHFVIISLSGWGLLVYGGYKLFTGGKGKKEEVL 90
BLAST of PvulFLAVERTChr11.688 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9V5H7|A0A0L9V5H7_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0145230 PE=4 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.727e-56 Identity = 85/90 (94.44%), Postives = 88/90 (97.78%), Query Frame = 0 Query: 1 MASFARGAASLTRVGLSSSKTPIQLIHRRGLAGAADHHGPPKVNFWSDPMSPSKWKEEHFVIISLSGWGLLFYGGYKLFTGGKGKKEELV 90 MASFARGAASLTRVGLS+SKTPIQLIHRRGLAGAADHHGPPKVNFW DPMSPSKWKEEHFVIISLSGWGLL YGGYKLFTGGKGKKEE++ Sbjct: 1 MASFARGAASLTRVGLSASKTPIQLIHRRGLAGAADHHGPPKVNFWKDPMSPSKWKEEHFVIISLSGWGLLVYGGYKLFTGGKGKKEEVL 90
BLAST of PvulFLAVERTChr11.688 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6LH45|A0A4D6LH45_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2370 PE=4 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.630e-55 Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0 Query: 1 MASFARGAASLTRVGLSSSKTPIQLIHRRGLAGAADHHGPPKVNFWSDPMSPSKWKEEHFVIISLSGWGLLFYGGYKLFTGGKGKKEE 88 MASFARGAASLTRVGLSSSKTPIQLIHRRGLAGAADHHGPPKVNFW DPMSPSKWKEEHFVIISL+GWGLL YGGYKLFTGGKGKKEE Sbjct: 1 MASFARGAASLTRVGLSSSKTPIQLIHRRGLAGAADHHGPPKVNFWKDPMSPSKWKEEHFVIISLAGWGLLVYGGYKLFTGGKGKKEE 88
BLAST of PvulFLAVERTChr11.688 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TPB1|A0A151TPB1_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_022472 PE=4 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 6.372e-51 Identity = 81/90 (90.00%), Postives = 84/90 (93.33%), Query Frame = 0 Query: 1 MASFARGAASLTRVGLSSSKTPIQLIHRRGLAGAADHHGPPKVNFWSDPMSPSKWKEEHFVIISLSGWGLLFYGGYKLFTGGKGKKEELV 90 MAS RGAASLTRVGLSSSKTPIQLIHRRGLA DHHGPPKV+FW DPMSPSKWKEEHFVIISLSGWGLLFYGGYKLFTGGKGKKEE++ Sbjct: 1 MASLVRGAASLTRVGLSSSKTPIQLIHRRGLA---DHHGPPKVDFWKDPMSPSKWKEEHFVIISLSGWGLLFYGGYKLFTGGKGKKEEVL 87
BLAST of PvulFLAVERTChr11.688 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8KNA5|A0A8B8KNA5_ABRPR (Uncharacterized protein LOC113857520 OS=Abrus precatorius OX=3816 GN=LOC113857520 PE=4 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.172e-48 Identity = 75/92 (81.52%), Postives = 85/92 (92.39%), Query Frame = 0 Query: 1 MASFARGAASLTRVGLSSSKTPIQLIHRRGLAGAADHHGPPKVNFWSDPMSPSKWKEEHFVIISLSGWGLLFYGGYKLFTGGKGKKE-ELVK 91 MAS ARGAASL+R+G+S++KTPIQLIHRRGLAGAADHHGPPKV+ W DPMSPSKWKEEHFVI+SL+GWGLL +GGYK F+GGK KKE ELVK Sbjct: 1 MASLARGAASLSRIGISTAKTPIQLIHRRGLAGAADHHGPPKVDCWKDPMSPSKWKEEHFVIVSLAGWGLLIFGGYKFFSGGKDKKEKELVK 92
BLAST of PvulFLAVERTChr11.688 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445KGD7|A0A445KGD7_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_016183 PE=4 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.435e-48 Identity = 76/94 (80.85%), Postives = 85/94 (90.43%), Query Frame = 0 Query: 1 MASFARGAASLTRVGLSSSKTPIQLIHRRGLAGAADHHGPPKVNFWSDPMSPSKWKEEHFVIISLSGWGLLFYGGYKLFTGGKGKKEELVKEAA 94 MASFARGAASLTR+GLSSSKTP+QLIHRRGLA DHHGPPKV W DPMSPSKWKEEHFVI+SL+GWGLL YGG+KL TGGKGKKEE++ +A+ Sbjct: 1 MASFARGAASLTRIGLSSSKTPLQLIHRRGLA---DHHGPPKVACWKDPMSPSKWKEEHFVIVSLTGWGLLIYGGFKLATGGKGKKEEVLAKAS 91
BLAST of PvulFLAVERTChr11.688 vs. ExPASy TrEMBL (2024)
Match: tr|I1KF57|I1KF57_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_06G297500 PE=4 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.435e-48 Identity = 76/94 (80.85%), Postives = 85/94 (90.43%), Query Frame = 0 Query: 1 MASFARGAASLTRVGLSSSKTPIQLIHRRGLAGAADHHGPPKVNFWSDPMSPSKWKEEHFVIISLSGWGLLFYGGYKLFTGGKGKKEELVKEAA 94 MASFARGAASLTR+GLSSSKTP+QLIHRRGLA DHHGPPKV W DPMSPSKWKEEHFVI+SL+GWGLL YGG+KL TGGKGKKEE++ +A+ Sbjct: 1 MASFARGAASLTRIGLSSSKTPLQLIHRRGLA---DHHGPPKVACWKDPMSPSKWKEEHFVIVSLTGWGLLIYGGFKLATGGKGKKEEVLAKAS 91
BLAST of PvulFLAVERTChr11.688 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445HNX5|A0A445HNX5_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_033955 PE=4 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 6.277e-48 Identity = 76/90 (84.44%), Postives = 81/90 (90.00%), Query Frame = 0 Query: 1 MASFARGAASLTRVGLSSSKTPIQLIHRRGLAGAADHHGPPKVNFWSDPMSPSKWKEEHFVIISLSGWGLLFYGGYKLFTGGKGKKEELV 90 MASFARGAASLTR+GLS+SKTP+QLIHRRGLA DHHGPPKV W DPMSPSKWKEEHFVI+SL+GWGLL YGGYKL TGGKGKKEE V Sbjct: 1 MASFARGAASLTRIGLSTSKTPLQLIHRRGLA---DHHGPPKVACWKDPMSPSKWKEEHFVIVSLTGWGLLIYGGYKLATGGKGKKEEAV 87
BLAST of PvulFLAVERTChr11.688 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371EB64|A0A371EB64_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_58311 PE=4 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.505e-47 Identity = 78/113 (69.03%), Postives = 88/113 (77.88%), Query Frame = 0 Query: 1 MASFARGAASLTRVGLSSSKTPIQLIHRRGLAGAA------------------DHHGPPKVNFWSDPMSPSKWKEEHFVIISLSGWGLLFYGGYKLFTGGKGKKEELVKEAAH 95 MAS RGAASLTR+G+SSSKTPIQLIHRRGLAGAA +HHGPP+V+FW DP SPSKWKEEHFVI+SL+GWGLLFYGGYK FTGGKGKKEE + +A+H Sbjct: 1 MASLVRGAASLTRIGISSSKTPIQLIHRRGLAGAAGNFPIRFFSSHFLKSPRINHHGPPRVDFWKDPTSPSKWKEEHFVIVSLTGWGLLFYGGYKFFTGGKGKKEEELVKASH 113
BLAST of PvulFLAVERTChr11.688 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:8964450-8965166 FORWARD LENGTH=93) HSP 1 Score: 105.145 bits (261), Expect = 7.106e-31 Identity = 53/84 (63.10%), Postives = 60/84 (71.43%), Query Frame = 0 Query: 1 MASFARGAASLTRVGLSS-SKTPIQLIHRRGLAGAADHHGPPKVNFWSDPMSPSKWKEEHFVIISLSGWGLLFYGGYKLFTGGK 83 MASFAR A SL ++ + S + RR LAGAADHHG KV+FW P +P WKEEHFV+ISLSGWGLLFY GYKL TGGK Sbjct: 1 MASFARRAMSLAQIPSARISSGAASIGQRRCLAGAADHHGSTKVDFWKQPTNPGNWKEEHFVLISLSGWGLLFYSGYKLATGGK 84
BLAST of PvulFLAVERTChr11.688 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:8964450-8965237 FORWARD LENGTH=102) HSP 1 Score: 63.5438 bits (153), Expect = 2.098e-14 Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 0 Query: 1 MASFARGAASLTRVGLSS-SKTPIQLIHRRGLAGAADHHGPPKVNFWSDPMSPSKWKEEHFV 61 MASFAR A SL ++ + S + RR LAGAADHHG KV+FW P +P WKEEH++ Sbjct: 1 MASFARRAMSLAQIPSARISSGAASIGQRRCLAGAADHHGSTKVDFWKQPTNPGNWKEEHWI 62 The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr11.688 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of PvulFLAVERTChr11.688 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of PvulFLAVERTChr11.688 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11) Total hits: 2
InterPro
Analysis Name: Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL
Date Performed: 2024-08-19
Analysis Name: InterProScan Analysis for Phaseolus vulgaris cv. Flavert genome v1.0 Date Performed: 2024-08-19
Sequences
The
following sequences are available for this feature:
mRNA sequence >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.688 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.688; Name=PvulFLAVERTChr11.688; organism=Phaseolus vulgaris; type=mRNA; length=2017bpback to top protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.688 >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.688 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.688; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.688; organism=Phaseolus vulgaris; type=polypeptide; length=95bpback to top mRNA from alignment at Chr11:15091138..15095154+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.688 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.688; Name=PvulFLAVERTChr11.688; organism=Phaseolus vulgaris; type=mRNA; length=4017bp; location=Sequence derived from: Chr11:15091138..15095154+ (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr11:15091138..15095154+ >drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.688 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr11.688; Name=PvulFLAVERTChr11.688; organism=Phaseolus vulgaris; type=CDS; length=288bp; location=Sequence derived from: Chr11:15091138..15095154+ (Phaseolus vulgarisback to top |