Vigun11g126900.1

Transcript Overview
NameVigun11g126900.1
Unique NamedrVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length369
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu11chromosomeVu11:33405448..33408501 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.2n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjvunL038Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvunL0248Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvunL303Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvunL432Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvunL0894Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvunL0999Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvunL1045Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carvunL018Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavunL082Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carvunL162Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavunL235Cajanus cajan cv. Asha genome v2.0Cajanus cajan
psvunL391Pisum sativum Cameor genome v1aPisum sativum
carvunL403Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavunL319Cajanus cajan cv. Asha genome v2.0Cajanus cajan
psvunL649Pisum sativum Cameor genome v1aPisum sativum
vunvunL003Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunL017Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vunvunR085Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vssvunL014Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvunL103Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvunL149Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vuvunL003Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvunL195Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vuvunL078Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vssvunL159Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvunL231Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvunL271Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvunL444Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vfhvunL520Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vuvunL315Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvunL597Vicia faba inbred line Hedin/2 genome v1.0Vicia faba

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.6g019400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.Ca_v2.0_18870Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
rna-TanjilR_23656Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Va08G059030.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg7748.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Va05G047940.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Cc_v2.0_09556.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Phvul.011G094200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-TanjilR_01310Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.005G124000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun05g236300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun05g236300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun11g126900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun11g126900drVigUngu.IT97K.1.2.Vigun11g126900.v1.2Vigna unguiculatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.exon.1drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.exon.1Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.exon.2drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.exon.2Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.exon.3drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.exon.3Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.exon.4drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.exon.4Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.exon.5drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.exon.5Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.exon.6drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.exon.6Vigna unguiculataexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.five_prime_UTR.1drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.five_prime_UTR.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.CDS.1drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.CDS.1Vigna unguiculataCDS
drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.CDS.2drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.CDS.2Vigna unguiculataCDS
drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.CDS.3drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.CDS.3Vigna unguiculataCDS
drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.CDS.4drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.CDS.4Vigna unguiculataCDS
drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.CDS.5drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.CDS.5Vigna unguiculataCDS
drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.CDS.6drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.CDS.6Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.three_prime_UTR.1drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2.three_prime_UTR.1Vigna unguiculatathree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2Vigna unguiculatapolypeptide
drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2-proteinVigna unguiculatapolypeptide


Homology
[Close]
BLAST of Vigun11g126900.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6LHC0|A0A4D6LHC0_VIGUN (Transmembrane protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2582 PE=4 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.458e-83
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 
Query:    1 MTGKNHSHGSNENFRCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAALSSPPPSE 122
            MTGKNHSHGSNENFRCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAALSSPPPSE
Sbjct:    1 MTGKNHSHGSNENFRCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAALSSPPPSE 122
[Close]
BLAST of Vigun11g126900.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SC27|A0A0S3SC27_PHAAN (Transmembrane protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G166000 PE=4 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 5.532e-81
Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 0 
Query:    1 MTGKNHSHGSNENFRCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAALSSPPPSE 122
            MTGKN SHGSNEN RCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMW+HFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAALSSPPPSE
Sbjct:    1 MTGKNLSHGSNENIRCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWIHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAALSSPPPSE 122
[Close]
BLAST of Vigun11g126900.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9V6K3|A0A0L9V6K3_PHAAN (Transmembrane protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0143210 PE=4 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 5.532e-81
Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 0 
Query:    1 MTGKNHSHGSNENFRCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAALSSPPPSE 122
            MTGKN SHGSNEN RCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMW+HFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAALSSPPPSE
Sbjct:    1 MTGKNLSHGSNENIRCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWIHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAALSSPPPSE 122
[Close]
BLAST of Vigun11g126900.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7AGM4|V7AGM4_PHAVU (Gb protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G094200g PE=4 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 1.353e-73
Identity = 109/122 (89.34%), Postives = 113/122 (92.62%), Query Frame = 0 
Query:    1 MTGKNHSHGSNENFRCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAALSSPPPSE 122
            MTG N SHGSN+N +C HCAGPLSKNMET NWTVSPLVRDSFSMIGSAVGGT SAFYGFNHVMPVVRR VKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAA+SSPP  +
Sbjct:    1 MTGTNLSHGSNQNIQCHHCAGPLSKNMETRNWTVSPLVRDSFSMIGSAVGGTASAFYGFNHVMPVVRRSVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAAVSSPPSED 122
[Close]
BLAST of Vigun11g126900.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA87B9S2|A0AA87B9S2_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS31353 PE=4 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 4.474e-73
Identity = 108/122 (88.52%), Postives = 112/122 (91.80%), Query Frame = 0 
Query:    1 MTGKNHSHGSNENFRCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAALSSPPPSE 122
            M G N  HGSN+N RC HCAGPLSKNMETSNWTV PLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMW+HFLIGTPPVIVFSS CAGLAGGAVPA+AQLVSSSYHAALSSPP  +
Sbjct:    1 MAGTNLGHGSNKNIRCHHCAGPLSKNMETSNWTVPPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWVHFLIGTPPVIVFSSTCAGLAGGAVPAIAQLVSSSYHAALSSPPSED 122
[Close]
BLAST of Vigun11g126900.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371FKW0|A0A371FKW0_MUCPR (Transmembrane protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_40680 PE=4 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 2.404e-70
Identity = 105/122 (86.07%), Postives = 110/122 (90.16%), Query Frame = 0 
Query:    1 MTGKNHSHGSNENFRCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAALSSPPPSE 122
            M G N S GSN+N RC HCAGPL+KNMETSNWTV PLVRDSFSMIGSAVGGTTSAFYGFNH+MPVVRRCVKGPMWLHFLIGTPPVIVFSS CAGLAGGAVPALAQLVSSSY+AA SSP   +
Sbjct:    1 MAGTNLSGGSNKNIRCHHCAGPLTKNMETSNWTVPPLVRDSFSMIGSAVGGTTSAFYGFNHIMPVVRRCVKGPMWLHFLIGTPPVIVFSSTCAGLAGGAVPALAQLVSSSYNAAFSSPSEDD 122
[Close]
BLAST of Vigun11g126900.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TNV5|A0A151TNV5_CAJCA (Transmembrane protein OS=Cajanus cajan OX=3821 GN=KK1_022373 PE=4 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 1.045e-69
Identity = 103/122 (84.43%), Postives = 111/122 (90.98%), Query Frame = 0 
Query:    1 MTGKNHSHGSNENFRCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAALSSPPPSE 122
            M   N S GS +N RC HCAGPLSK+METSNWTV PLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRC+KGPMWLHFL+GTPPVIVFSSACAG+AGGAVPALAQLVSSSY+AALS+PP  +
Sbjct:    1 MADTNLSDGSIKNIRCHHCAGPLSKDMETSNWTVPPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCIKGPMWLHFLVGTPPVIVFSSACAGVAGGAVPALAQLVSSSYNAALSTPPSED 122
[Close]
BLAST of Vigun11g126900.1 vs. ExPASy TrEMBL (2024)
Match: tr|I3STH5|I3STH5_LOTJA (Transmembrane protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 9.710e-67
Identity = 99/113 (87.61%), Postives = 104/113 (92.04%), Query Frame = 0 
Query:   10 SNENFRCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAALSSPPPSE 122
            S  + RC HCAGPLSK METS+WT++PLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRR VKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHA LSSPP  +
Sbjct:    9 SKNDLRCHHCAGPLSKEMETSDWTIAPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRYVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHATLSSPPSKD 121
[Close]
BLAST of Vigun11g126900.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3PRU6|A0A2K3PRU6_TRIPR (Transmembrane protein OS=Trifolium pratense OX=57577 GN=L195_g014751 PE=4 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.528e-64
Identity = 96/114 (84.21%), Postives = 102/114 (89.47%), Query Frame = 0 
Query:    9 GSNENFRCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAALSSPPPSE 122
             SN+N RC HCAGPLSK METS WTV+PL+RDSFSMIGSAVGGT SAFYGFNHVMPVV R VKGPMW+HFL+GTPPVIVFSS CAGLAGGAVPALAQLVSSSYHAA SSPP  +
Sbjct:    2 ASNKNIRCHHCAGPLSKEMETSKWTVAPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVHRYVKGPMWVHFLVGTPPVIVFSSVCAGLAGGAVPALAQLVSSSYHAAQSSPPSDD 115
[Close]
BLAST of Vigun11g126900.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1J6IF44|A0A1J6IF44_NICAT (Transmembrane protein OS=Nicotiana attenuata OX=49451 GN=A4A49_07798 PE=4 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.247e-64
Identity = 95/114 (83.33%), Postives = 103/114 (90.35%), Query Frame = 0 
Query:    4 KNHSHGSNENFRCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAALSS 117
            K++S  S+ N RCPHCAGPLSK METS WTV PL+RDSFSMIGSAVGGTTSAFYGFNHVMP+VRR +KGPMWLHFL+G PPVIVFSSACAGLAGGAVPA AQL SSSYHAA+SS
Sbjct:   22 KDNSGSSSSNMRCPHCAGPLSKEMETSQWTVPPLIRDSFSMIGSAVGGTTSAFYGFNHVMPIVRRWIKGPMWLHFLVGAPPVIVFSSACAGLAGGAVPAFAQLASSSYHAAISS 135
[Close]
BLAST of Vigun11g126900.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:1047754-1049026 FORWARD LENGTH=138)

HSP 1 Score: 178.718 bits (452), Expect = 5.992e-59
Identity = 86/114 (75.44%), Postives = 97/114 (85.09%), Query Frame = 0 
Query:    9 GSNENFRCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAAL-SSPPPS 121
            G     RC HCAGPL+KN+ET+ WTV+P +RDSFSMIGSAVGGT SAF GF+HVMP+VR+ +KGPMWLHFL+G PPVIV SSACAGLAGGAVPALAQL SSSYHAA+ SS PP 
Sbjct:    9 GKEIGSRCHHCAGPLTKNLETNEWTVAPFIRDSFSMIGSAVGGTASAFIGFHHVMPIVRKWIKGPMWLHFLVGAPPVIVVSSACAGLAGGAVPALAQLASSSYHAAVHSSQPPQ 122
[Close]
BLAST of Vigun11g126900.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:6033797-6035216 FORWARD LENGTH=133)

HSP 1 Score: 177.948 bits (450), Expect = 1.162e-58
Identity = 84/114 (73.68%), Postives = 94/114 (82.46%), Query Frame = 0 
Query:    9 GSNENFRCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHAAL-SSPPPS 121
            G +   RC HCAGPL++N+ETS WTV P +RDSFSMIGSAVGGT SAF GFNH MP+VR+ +KGPMWLHFL+G PPVIV SSACAGLAGG VPALAQL SSSY AA+ SS PP 
Sbjct:    5 GHDIEIRCHHCAGPLTRNLETSKWTVDPFIRDSFSMIGSAVGGTASAFIGFNHAMPIVRKWIKGPMWLHFLVGAPPVIVLSSACAGLAGGTVPALAQLASSSYRAAVHSSQPPQ 118
[Close]
BLAST of Vigun11g126900.1 vs. Araport11
Match: | (Symbols: RED1 | Retarded Embryo Development 1 | chr2:17511071-17512898 REVERSE LENGTH=158)

HSP 1 Score: 75.485 bits (184), Expect = 4.217e-18
Identity = 35/92 (38.04%), Postives = 53/92 (57.61%), Query Frame = 0 
Query:   15 RCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQL 106
            RCP C   L+ N E   WT++P++ D+ ++ GS +GG  SA + FN  +P ++    G   L FL+G P ++V+S   A   G A+P  AQL
Sbjct:   30 RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSKRLSFLVGVPLLLVYSGVGAAFGGYALPKFAQL 121
[Close]
BLAST of Vigun11g126900.1 vs. Araport11
Match: | (Symbols: RED1 | Retarded Embryo Development 1 | chr2:17509933-17512898 REVERSE LENGTH=166)

HSP 1 Score: 75.0998 bits (183), Expect = 5.653e-18
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 0 
Query:   15 RCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLV 107
            RCP C   L+ N E   WT++P++ D+ ++ GS +GG  SA + FN  +P ++    G   L FL+G P ++V+S   A   G A+P  AQL 
Sbjct:   30 RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSKRLSFLVGVPLLLVYSGVGAAFGGYALPKFAQLT 122
[Close]
BLAST of Vigun11g126900.1 vs. Araport11
Match: | (Symbols: RED1 | Retarded Embryo Development 1 | chr2:17509933-17512898 REVERSE LENGTH=204)

HSP 1 Score: 63.929 bits (154), Expect = 2.194e-13
Identity = 29/81 (35.80%), Postives = 46/81 (56.79%), Query Frame = 0 
Query:   15 RCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCVKGPMWLHFLIGTPPVIVFSSACAGL 95
            RCP C   L+ N E   WT++P++ D+ ++ GS +GG  SA + FN  +P ++    G   L FL+G P ++V+S   A  
Sbjct:   30 RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSKRLSFLVGVPLLLVYSGVGAAF 110
The following BLAST results are available for this feature:
BLAST of Vigun11g126900.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A4D6LHC0|A0A4D6LHC0_VIGUN1.458e-83100.00Transmembrane protein OS=Vigna unguiculata OX=3917... [more]
tr|A0A0S3SC27|A0A0S3SC27_PHAAN5.532e-8197.54Transmembrane protein OS=Vigna angularis var. angu... [more]
tr|A0A0L9V6K3|A0A0L9V6K3_PHAAN5.532e-8197.54Transmembrane protein OS=Phaseolus angularis OX=39... [more]
tr|V7AGM4|V7AGM4_PHAVU1.353e-7389.34Gb protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_... [more]
tr|A0AA87B9S2|A0AA87B9S2_9FABA4.474e-7388.52Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A371FKW0|A0A371FKW0_MUCPR2.404e-7086.07Transmembrane protein (Fragment) OS=Mucuna prurien... [more]
tr|A0A151TNV5|A0A151TNV5_CAJCA1.045e-6984.43Transmembrane protein OS=Cajanus cajan OX=3821 GN=... [more]
tr|I3STH5|I3STH5_LOTJA9.710e-6787.61Transmembrane protein OS=Lotus japonicus OX=34305 ... [more]
tr|A0A2K3PRU6|A0A2K3PRU6_TRIPR1.528e-6484.21Transmembrane protein OS=Trifolium pratense OX=575... [more]
tr|A0A1J6IF44|A0A1J6IF44_NICAT2.247e-6483.33Transmembrane protein OS=Nicotiana attenuata OX=49... [more]
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BLAST of Vigun11g126900.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vigun11g126900.1 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs arabidopsis Araport11)
Total hits: 5
Match NameE-valueIdentityDescription
|5.992e-5975.44Symbols: no symbol available | no full name availa... [more]
|1.162e-5873.68Symbols: no symbol available | no full name availa... [more]
|4.217e-1838.04Symbols: RED1 | Retarded Embryo Development 1 | ch... [more]
|5.653e-1837.63Symbols: RED1 | Retarded Embryo Development 1 | ch... [more]
|2.194e-1335.80Symbols: RED1 | Retarded Embryo Development 1 | ch... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna unguiculata L. Walp IT97K-499-35 genome v1.2
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34459OS01G0264500 PROTEINcoord: 10..118

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2; Name=Vigun11g126900.1; organism=Vigna unguiculata; type=mRNA; length=369bp
ATGACAGGCAAAAACCACAGTCACGGTTCCAATGAAAATTTTCGATGCCC
TCACTGCGCAGGACCTCTTTCTAAGAACATGGAAACCAGTAATTGGACAG
TTTCCCCCCTTGTGCGGGACAGTTTTTCTATGATTGGTTCTGCCGTTGGT
GGCACTACAAGTGCATTTTATGGATTCAACCATGTTATGCCTGTTGTTAG
GAGATGCGTAAAAGGGCCTATGTGGTTACATTTCCTCATTGGTACACCGC
CTGTGATAGTATTCTCTTCAGCCTGTGCAGGACTGGCAGGTGGGGCTGTT
CCTGCTCTTGCACAACTTGTTTCCTCGTCATACCATGCAGCACTATCATC
ACCTCCTCCTTCAGAATAA
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protein sequence of drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2

>drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2; Name=drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2; organism=Vigna unguiculata; type=polypeptide; length=123bp
MTGKNHSHGSNENFRCPHCAGPLSKNMETSNWTVSPLVRDSFSMIGSAVG
GTTSAFYGFNHVMPVVRRCVKGPMWLHFLIGTPPVIVFSSACAGLAGGAV
PALAQLVSSSYHAALSSPPPSE*
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mRNA from alignment at Vu11:33405448..33408501+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2; Name=Vigun11g126900.1; organism=Vigna unguiculata; type=mRNA; length=3054bp; location=Sequence derived from: Vu11:33405448..33408501+ (Vigna unguiculata
CAATTAGACAAAGCCACTGTTTCAACCGTTTCTAGGTTCTACAGCATCAA
CCAAACTGAACCATTGAGGTGACAAGAGCAGAGGAACATGACAGGCAAAA
ACCACAGTCACGGTTCCAATGAAAATTTTCGATGCCCTCACTGCGCAGGA
CCTCTTTCTAAGAACATGGTTTTTTCCAATTCATAATTTCAACACTTTCC
CTGAAATCttttttttttttttttgaatttattgttttttttttttctaa
tttttGTGCAGGAAACCAGTAATTGGACAGTTTCCCCCCTTGTGCGGGAC
AGTTTTTCTATGGTCAGTTCTTCCCACCCCACTTCCTTTTTGCTCTCAAA
ATTCAAACTTTTTGCGCGCTTTGATATTTATTGTTGAGCTTTGGATCTAG
TATTGTGATGGGCAGTGAAATTTGTTTGATTTTTTAAAAGGGTTTCTGAG
CTCTTGATTGTTAATCGAGGGATTTTGATTTTGTGCAGATTGGTTCTGCC
GTTGGTGGCACTACAAGTGCATTTTATGGATTCAACCATGGTATCTACTA
TTTTAGTTTTGTTTTTGTTTATATTTGAATAAGATTATATGTTTTTTATC
TCAATGTGGTAGTTGTTATTCTGTTCTATTGGGTAGTTCAAGTTGGAAAA
GATGTTCCTCTCGTACAATGAAAATGAGGATCAGAGGATGTTAAACAGAG
TAACAATAGAGATTGCAGACGAACAAAAGCTTAATGTGGTTCGCATTTAT
GCCGTCTTAATTAATATTCATTATCCTAAAATAACATTACAAATTTTATG
TACAAACTTGAGAAACTTCTCTCACTTCGATTGTAATCTTCTCTTTAGGC
TGTGTTGACTTTGGTATCATCTCAAAATTTAGGTTTAGGTCTATTAGACT
ACCCTCTATTAAGTCATGTTTGGAAAATGGAAAAATGGGCATGCATTGTG
CACATGATTTTTTGGTTACCAGTTTTTTAATGTTCCACTCTCACGAGTCA
ACTAATCTTAGTGAGTAGGATTTGACATAGCTCATTGTTTTTGTTGTCAA
AAAACTTAAAATACTGTTACTAAAACAGATATGTTTAATTCATTCAAACT
TGAGTTGGGAGATTTAGGGCAAGTAGTAATGAGATGAATAAGATTGTAGT
TTTATCTGTTTGTAAATTGTAAATTGCAGACATAGTTGGCCTTCCAAACC
AAAAGATTGAAGCTTTAATGTTTGATATTAACAACCTCTATTGTTGAAAG
AGTTTTCTTTTTTCCATTTGTAATGCAGTTATGCCTGTTGTTAGGAGATG
CGTAAAAGGGCCTATGTGGTTACATTTCCTCATTGGTGTAAGTTTCTTGT
GCCTTTTGAACCATTTATTTTTCTTTTCATTCAGTTTTATTTTCTGTCAG
CTAGTTTCTTTAACCCATTAACCTGACTGATGTATCCTTCTGTAATCTGT
TAAGAGAATCGTGATGCTATAATAGAACTTTAAATAGAAAAAACTTCTTG
CGCATATTACTTTATTTGCACCTTGATTGCTACATAGTTGCACCATCCAT
GATGGTAATCATGTATAGTCCTAGATATTTTGCATGTCACTTAACAAAAG
GGGATGTGTCACATTCCTGAAGCTGTTAATCTATTAGCTGCATTTTGTCA
ACGTCTTAGAAAAATTTCCTTGAGAAAATTTTAGTGCATTTTTTGAAACA
CTGAAGATGTCCACAACCTTCAACCACCATATTTGTTTCCTCTTGGATCA
GTCCTGTTTTGATGCATAAATCATTGATTGACCTCCCTGTAAACTATTCA
TACTTTTCTACACATGCTGTGGAATTGTGAATTTAGGCTCTCTCTCTCTA
CATGTATTCTTCTGGCTCCACTCAACTTGGTTTAATTGTGTAATATGTAt
gttccggtacactcattagtttcacattacttaagagttgaggttaatga
cagattaaatatcttttctttcttctaccttctgatgcaccttttaatga
taaaacagtgacggaaatccagctttcaaggcggacaataacctaataca
gtgattgacaataacaatatcactcgatgaacttgacatcgaacaACGTA
CATAAGTTGTAGTCCTTATATATTTTGTACCACAGACTGGGCTTTAATAT
GCAGTTTCTACCACACATTTTCTAGATTATTTTATGTTAACATGTTCATA
TTGGAGTATCTAAAGTGAGTTCATAGTATTCAAGCATTATAGAGCTTTCT
CTCATATTGTGCCAGCAGAAACACTCAGAGCTAAACTTTCTGCTTTCTTA
TTCAAGCGAAAACTTGCTAGTTTTGTTAACAGCATACTTACTGAAACTGT
TCTCTGATTTTCAGACACCGCCTGTGATAGTATTCTCTTCAGCCTGTGCA
GGACTGGCAGGTGAATTTCTGATTGTGTTATTACTTCTCCTGTCTCAAAA
GTTAAAATTTCATGGTCAAGAAGTGTTCTAATCCTAATGATGTTTTCTGT
GTTTGACAAGTGTCAACCTTTTCATTGGTTTTATCCTTGTGTTGTGATGT
ATGTTTACTGTGTATCTGAGTTGATAACAGTATGATTGTAATAACTGTAG
GTGGGGCTGTTCCTGCTCTTGCACAACTTGTTTCCTCGTCATACCATGCA
GCACTATCATCACCTCCTCCTTCAGAATAAGATTCAGAAGTCAAGAACTT
CCTCTACCCTCTAAAATTTACGCTCATACGTATATAATGGTTTTCTTCCA
CTATAGTCAGCATTCATGCTACATCTGTGCTGAGAGTTTTGTTTTATGTT
TTTTCCTGTGAATGATGCTTTTCAGGTTTAATCTTCATTATGTAAATTAA
GCTCTCATAAACTGGTTCTACAGATATACATTAACCGTGATTTTGTTTTA
TCGTTTGGTTTATTATGTTAATCAACGGCATTCGTTTTACTAGTTAGATT
CCGTGTGCTGTAACAGTATACTTATATGATATTCAACTTACTACTATAAA
TATGTATTTTTATTTTATTATAATAATAAACAATTTTATCTGATGTTCTT
ATTA
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Coding sequence (CDS) from alignment at Vu11:33405448..33408501+

>drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun11g126900.1.v1.2; Name=Vigun11g126900.1; organism=Vigna unguiculata; type=CDS; length=369bp; location=Sequence derived from: Vu11:33405448..33408501+ (Vigna unguiculata
ATGACAGGCAAAAACCACAGTCACGGTTCCAATGAAAATTTTCGATGCCC
TCACTGCGCAGGACCTCTTTCTAAGAACATGGAAACCAGTAATTGGACAG
TTTCCCCCCTTGTGCGGGACAGTTTTTCTATGATTGGTTCTGCCGTTGGT
GGCACTACAAGTGCATTTTATGGATTCAACCATGTTATGCCTGTTGTTAG
GAGATGCGTAAAAGGGCCTATGTGGTTACATTTCCTCATTGGTACACCGC
CTGTGATAGTATTCTCTTCAGCCTGTGCAGGACTGGCAGGTGGGGCTGTT
CCTGCTCTTGCACAACTTGTTTCCTCGTCATACCATGCAGCACTATCATC
ACCTCCTCCTTCAGAATAA
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