Vigun05g216100.1

Transcript Overview
NameVigun05g216100.1
Unique NamedrVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length339
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu05chromosomeVu05:40806131..40807640 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.2n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjvunL053Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvunL080Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvunL0262Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvunL0543Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvunL443Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvunL0702Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvunL1016Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvunL1070Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carvunL043Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvunL065Pisum sativum Cameor genome v1aPisum sativum
ccavunL094Cajanus cajan cv. Asha genome v2.0Cajanus cajan
psvunL414Pisum sativum Cameor genome v1aPisum sativum
carvunL442Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavunL330Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavunL334Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavunL514Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvunL052Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvunL143Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vssvunL087Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvunL167Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vssvunL098Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvunL171Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vrvvunL212Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vuvunL087Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vssvunL220Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvunL456Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vuvunL337Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvunL641Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vuvunL366Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.005G104700.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va05G043880.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun05g216100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun05g216100drVigUngu.IT97K.1.2.Vigun05g216100.v1.2Vigna unguiculatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.exon.4drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.exon.4Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.exon.3drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.exon.3Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.exon.2drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.exon.2Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.exon.1drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.exon.1Vigna unguiculataexon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.three_prime_UTR.1drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.three_prime_UTR.1Vigna unguiculatathree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.CDS.3drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.CDS.3Vigna unguiculataCDS
drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.CDS.2drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.CDS.2Vigna unguiculataCDS
drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.CDS.1drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.CDS.1Vigna unguiculataCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.five_prime_UTR.2drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.five_prime_UTR.2Vigna unguiculatafive_prime_UTR
drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.five_prime_UTR.1drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2.five_prime_UTR.1Vigna unguiculatafive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2Vigna unguiculatapolypeptide
drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2-proteinVigna unguiculatapolypeptide


Homology
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6N754|A0A4D6N754_VIGUN (Large subunit ribosomal protein LP1 OS=Vigna unguiculata OX=3917 GN=DEO72_LG10g881 PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.320e-71
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 
Query:    1 MSIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            MSIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD
Sbjct:   20 MSIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 131
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SHC8|A0A0S3SHC8_PHAAN (60S acidic ribosomal protein P1 OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G096500 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.144e-69
Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 0 
Query:    1 MSIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            MSI ETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWP LFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD
Sbjct:    1 MSIAETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPTLFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9UMT8|A0A0L9UMT8_PHAAN (60S acidic ribosomal protein P1 OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g149700 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.144e-69
Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 0 
Query:    1 MSIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            MSI ETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWP LFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD
Sbjct:    1 MSIAETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPTLFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3TD73|A0A1S3TD73_VIGRR (60S acidic ribosomal protein P1-3-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106754226 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.144e-69
Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 0 
Query:    1 MSIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            MSI ETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWP LFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD
Sbjct:    1 MSIAETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPTLFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3TZJ4|A0A1S3TZJ4_VIGRR (60S acidic ribosomal protein P1-3-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106760225 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.901e-36
Identity = 105/112 (93.75%), Postives = 110/112 (98.21%), Query Frame = 0 
Query:    1 MSIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            MS+GETACSYAS+ILHDEGIAVTAD+I TLLKTAKVQV+S+WP LFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD
Sbjct:    1 MSVGETACSYASIILHDEGIAVTADNITTLLKTAKVQVESYWPTLFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RIA3|A0A0S3RIA3_PHAAN (60S acidic ribosomal protein P1 OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G336600 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 7.442e-36
Identity = 104/112 (92.86%), Postives = 108/112 (96.43%), Query Frame = 0 
Query:    1 MSIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            MS+GETACSYAS+ILHDEGIAVTAD I TLLKTAKVQV+S+WP LFAKLAEKKNLGDLIANAAGGGAP AVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD
Sbjct:    1 MSVGETACSYASIILHDEGIAVTADKITTLLKTAKVQVESYWPTLFAKLAEKKNLGDLIANAAGGGAPAAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9TFC9|A0A0L9TFC9_PHAAN (60S acidic ribosomal protein P1 OS=Phaseolus angularis OX=3914 GN=LR48_Vigan635s005700 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 7.442e-36
Identity = 104/112 (92.86%), Postives = 108/112 (96.43%), Query Frame = 0 
Query:    1 MSIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            MS+GETACSYAS+ILHDEGIAVTAD I TLLKTAKVQV+S+WP LFAKLAEKKNLGDLIANAAGGGAP AVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD
Sbjct:    1 MSVGETACSYASIILHDEGIAVTADKITTLLKTAKVQVESYWPTLFAKLAEKKNLGDLIANAAGGGAPAAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy TrEMBL (2024)
Match: tr|T2DPD1|T2DPD1_PHAVU (60S acidic ribosomal protein P1-3-like protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G104700g PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.580e-36
Identity = 103/112 (91.96%), Postives = 107/112 (95.54%), Query Frame = 0 
Query:    1 MSIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            MS+GETACSYASLILHDEGIAVT+D+I TLLK+AKVQVDSFWP LFAKLA KKNLGDLIANAAGGGAPVAVAAAPVAAA GG AAAAPAAEEKKKEEPEEESDDDMGFGLFD
Sbjct:    1 MSVGETACSYASLILHDEGIAVTSDNIVTLLKSAKVQVDSFWPTLFAKLAAKKNLGDLIANAAGGGAPVAVAAAPVAAAAGGGAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6NHN4|A0A4D6NHN4_VIGUN (Large subunit ribosomal protein LP1 OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g356 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.027e-34
Identity = 104/113 (92.04%), Postives = 109/113 (96.46%), Query Frame = 0 
Query:    1 MSIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIAN-AAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            MS+GETACSYASLILHDEGIAVTAD+IATLLKTAKV+V+S+WPALFAKLAEKKNLGDLIAN A GGGAP AVAAAPVAAAGGGAAA APAAEEKKKEEPEEESDDDMGFGLFD
Sbjct:    1 MSVGETACSYASLILHDEGIAVTADNIATLLKTAKVKVESYWPALFAKLAEKKNLGDLIANAAGGGGAPAAVAAAPVAAAGGGAAAPAPAAEEKKKEEPEEESDDDMGFGLFD 113
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9Q1A784|A0A9Q1A784_SALPP (60S ACIDIC RIBOSOMAL PROTEIN P1-1-RELATED OS=Salix purpurea OX=77065 GN=OIU79_025300 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.727e-34
Identity = 75/114 (65.79%), Postives = 94/114 (82.46%), Query Frame = 0 
Query:    1 MSIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIAN--AAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            MS+ E AC+YA+LILHDE I++T+D IATL+K A V V+S+WP+LFAKLA+K+N+GDLI N  A+G  APV+VA++   AAGG AA+AAPA EEKK+E P  ESDDDMGFGLFD
Sbjct:    1 MSLSELACTYATLILHDEDISITSDKIATLVKAASVNVESYWPSLFAKLADKRNVGDLIMNIGASGAAAPVSVASS-GPAAGGAAASAAPAIEEKKEEAP--ESDDDMGFGLFD 111
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8LEQ0|RLA13_ARATH (Large ribosomal subunit protein P1y OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 2.670e-34
Identity = 75/111 (67.57%), Postives = 88/111 (79.28%), Query Frame = 0 
Query:    2 SIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            ++GE ACSYA +IL DEGIA+TAD IATL+K A V ++S+WP LFAK+AEK+N+ DLI N   GG   A  AA   AAGGGAAAAAPAAEEKKK+EP EESD D+GFGLFD
Sbjct:    3 TVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLIMNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O23095|RLA12_ARATH (Large ribosomal subunit protein P1z OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.342e-33
Identity = 64/111 (57.66%), Postives = 82/111 (73.87%), Query Frame = 0 
Query:    2 SIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            ++GE ACSYA +IL DEGIA+T+D IATL+K A V+++S+WP LFAK+AEK+N+ DLI N   GG       +  A A  G AAAA  A+E+KK+EP EESD D+GFGLFD
Sbjct:    3 TVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLIMNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8LCW9|RLA11_ARATH (Large ribosomal subunit protein P1w OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.011e-32
Identity = 70/111 (63.06%), Postives = 83/111 (74.77%), Query Frame = 0 
Query:    2 SIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            ++GE ACSYA +IL DEGIA+TAD IATL+K A V ++S+WP LFAK+AEK+N+ DLI N    G       A  A A GG AAAAPAAEEKKK+EP EESD D+GFGLFD
Sbjct:    3 TVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLIMNVG-AGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P52855|RLA1_MAIZE (Large ribosomal subunit protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.898e-24
Identity = 66/112 (58.93%), Postives = 83/112 (74.11%), Query Frame = 0 
Query:    1 MSIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            M+ GE AC YA+LIL D+GIA+TA+ IAT++K A ++V+S+WPALFAKL EK+N+ DLI +    G+    A    AA  GGAAAAA  A E+KKEE +EESDDDMGF LFD
Sbjct:    1 MASGELACRYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLILSV---GSGGGAAPVAAAAPAGGAAAAAAPAVEEKKEEAKEESDDDMGFSLFD 109
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P08570|RLA1_DROME (Large ribosomal subunit protein P1 OS=Drosophila melanogaster OX=7227 GN=RpLP1 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.017e-20
Identity = 59/108 (54.63%), Postives = 69/108 (63.89%), Query Frame = 0 
Query:    5 ETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            E AC YASLIL D+ +AVT + I T+LK A V+V+ +WP LFAK  E  N+ DLI N  G G   A A     AA   A AA    EEKKKEE  ++SDDDMGFGLFD
Sbjct:    6 ELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITN-IGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P29763|RLA1_CHLRE (Large ribosomal subunit protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.203e-19
Identity = 36/62 (58.06%), Postives = 48/62 (77.42%), Query Frame = 0 
Query:    1 MSIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANA 62
            MS  E AC+YA+LILHD+G+ +TAD+I T+ K A V+V+ +WPALFAKL  KK++ DLI N 
Sbjct:    1 MSTSELACTYAALILHDDGLEITADNINTICKAAGVEVEGYWPALFAKLFAKKSMDDLITNV 62
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O01359|RLA1_OSCTI (Large ribosomal subunit protein P1 OS=Oscheius tipulae OX=141969 GN=rpl-21 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.155e-18
Identity = 54/108 (50.00%), Postives = 69/108 (63.89%), Query Frame = 0 
Query:    5 ETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            E AC YA+LIL D+ +A+T D IATLLK A ++ + FWP LFAK  E  ++ +LI + + G +    A A  AA  GGA AAA  AE K+    + ESDDDMGFGL D
Sbjct:    6 ELACVYAALILQDDEVAITGDKIATLLKAANIEFEPFWPGLFAKALEGVDVKNLITSVSSGAS-AGPAQAAAAAPAGGAPAAAAPAESKEGRRSQGESDDDMGFGLLD 112
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9HGV0|RLA1_ASPFU (Large ribosomal subunit protein P1 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=AFUA_1G06830 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.544e-17
Identity = 63/113 (55.75%), Postives = 75/113 (66.37%), Query Frame = 0 
Query:    1 MSIGETACSYASLILHDEGIAVTADSIATLLKTAKV-QVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            MS  E ACSYA+LIL D+G+ +TAD I TLL  AKV  V+  W +LFAK  E K++ DL+ N   G    A  AA   AA G AA A  AA E+KKEE +EESD+DMGFGLFD
Sbjct:    1 MSTAELACSYAALILADDGVEITADKIQTLLGAAKVADVEPIWTSLFAKALEGKDIKDLLTNV--GSGGAAAPAAVGGAAAGAAAPAEAAAAEEKKEEEKEESDEDMGFGLFD 111
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P49148|RLA1_ALTAL (Large ribosomal subunit protein P1 OS=Alternaria alternata OX=5599 GN=ALTA12 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.788e-17
Identity = 56/113 (49.56%), Postives = 72/113 (63.72%), Query Frame = 0 
Query:    1 MSIGETACSYASLILHDEGIAVTADSIATLLKTAKVQ-VDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            MS  E A SYA+LIL D+G+ +TAD + +L+K AK++ V+  W  LFAK  E K++ DL+ N   GG     A  P A      AA A  A E+KKEE +EESD+DMGFGLFD
Sbjct:    1 MSTSELATSYAALILADDGVDITADKLQSLIKAAKIEEVEPIWTTLFAKALEGKDVKDLLLNVGSGGG---AAPLPEALLLRWRAADAAPAAEEKKEEEKEESDEDMGFGLFD 110
[Close]
BLAST of Vigun05g216100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P05386|RLA1_HUMAN (Large ribosomal subunit protein P1 OS=Homo sapiens OX=9606 GN=RPLP1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.098e-16
Identity = 59/112 (52.68%), Postives = 70/112 (62.50%), Query Frame = 0 
Query:    2 SIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANA-AGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD 112
            S+ E AC Y++LILHD+ + VT D I  L+K A V V+ FWP LFAK     N+G LI N  AGG AP A AA     A   AAA A   + + K+E  EESDDDMGFGLFD
Sbjct:    3 SVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
[Close]
BLAST of Vigun05g216100.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:8369295-8369866 REVERSE LENGTH=111)

HSP 1 Score: 120.939 bits (302), Expect = 1.134e-36
Identity = 63/115 (54.78%), Postives = 79/115 (68.70%), Query Frame = 0 
Query:    1 MSIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEP--EEESDDDMGFGLFD* 113
            MS  E AC+YA+LILHD+GI +TA++I+ L+KTA V V+S+WP+LFAKL EKKN+ DLI N   GG  V   A PV  A   A+ +    EEKK E    +EES+DDM  GLFD*
Sbjct:    1 MSTSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIMNVGAGGCGV---ARPVTTAAPTASQSVSIPEEKKNEMEVIKEESEDDMIIGLFD* 112
[Close]
BLAST of Vigun05g216100.1 vs. Araport11
Match: | (Symbols: RPP1C, RPP1.3 | 60S acidic ribosomal protein P1-3, RPP1 co-orthologous gene 3 | chr5:19328019-19328724 REVERSE LENGTH=113)

HSP 1 Score: 117.857 bits (294), Expect = 2.024e-35
Identity = 76/112 (67.86%), Postives = 89/112 (79.46%), Query Frame = 0 
Query:    2 SIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD* 113
            ++GE ACSYA +IL DEGIA+TAD IATL+K A V ++S+WP LFAK+AEK+N+ DLI N   GG   A  AA   AAGGGAAAAAPAAEEKKK+EP EESD D+GFGLFD*
Sbjct:    3 TVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLIMNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD* 114
[Close]
BLAST of Vigun05g216100.1 vs. Araport11
Match: | (Symbols: RPP1C, RPP1.3 | 60S acidic ribosomal protein P1-3, RPP1 co-orthologous gene 3 | chr5:19328019-19328724 REVERSE LENGTH=113)

HSP 1 Score: 117.857 bits (294), Expect = 2.024e-35
Identity = 76/112 (67.86%), Postives = 89/112 (79.46%), Query Frame = 0 
Query:    2 SIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD* 113
            ++GE ACSYA +IL DEGIA+TAD IATL+K A V ++S+WP LFAK+AEK+N+ DLI N   GG   A  AA   AAGGGAAAAAPAAEEKKK+EP EESD D+GFGLFD*
Sbjct:    3 TVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLIMNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD* 114
[Close]
BLAST of Vigun05g216100.1 vs. Araport11
Match: | (Symbols: RPP1B, RPP1.2 | 60S acidic ribosomal protein P1-2, RPP1 co-orthologous gene 2 | chr4:346179-346957 REVERSE LENGTH=113)

HSP 1 Score: 114.775 bits (286), Expect = 3.291e-34
Identity = 65/112 (58.04%), Postives = 83/112 (74.11%), Query Frame = 0 
Query:    2 SIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD* 113
            ++GE ACSYA +IL DEGIA+T+D IATL+K A V+++S+WP LFAK+AEK+N+ DLI N   GG       +  A A  G AAAA  A+E+KK+EP EESD D+GFGLFD*
Sbjct:    3 TVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLIMNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD* 114
[Close]
BLAST of Vigun05g216100.1 vs. Araport11
Match: | (Symbols: RPP1B, RPP1.2 | 60S acidic ribosomal protein P1-2, RPP1 co-orthologous gene 2 | chr4:346179-346957 REVERSE LENGTH=113)

HSP 1 Score: 114.775 bits (286), Expect = 3.291e-34
Identity = 65/112 (58.04%), Postives = 83/112 (74.11%), Query Frame = 0 
Query:    2 SIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD* 113
            ++GE ACSYA +IL DEGIA+T+D IATL+K A V+++S+WP LFAK+AEK+N+ DLI N   GG       +  A A  G AAAA  A+E+KK+EP EESD D+GFGLFD*
Sbjct:    3 TVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLIMNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD* 114
[Close]
BLAST of Vigun05g216100.1 vs. Araport11
Match: | (Symbols: RPP1A, RPP1.1 | 60S acidic ribosomal protein P1-1, RPP1 co-orthologous gene 1 | chr1:50284-50954 REVERSE LENGTH=112)

HSP 1 Score: 114.005 bits (284), Expect = 7.665e-34
Identity = 71/112 (63.39%), Postives = 84/112 (75.00%), Query Frame = 0 
Query:    2 SIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD* 113
            ++GE ACSYA +IL DEGIA+TAD IATL+K A V ++S+WP LFAK+AEK+N+ DLI N    G       A  A A GG AAAAPAAEEKKK+EP EESD D+GFGLFD*
Sbjct:    3 TVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLIMNVG-AGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD* 113
[Close]
BLAST of Vigun05g216100.1 vs. Araport11
Match: | (Symbols: RPP1A, RPP1.1 | 60S acidic ribosomal protein P1-1, RPP1 co-orthologous gene 1 | chr1:50284-50954 REVERSE LENGTH=112)

HSP 1 Score: 114.005 bits (284), Expect = 7.665e-34
Identity = 71/112 (63.39%), Postives = 84/112 (75.00%), Query Frame = 0 
Query:    2 SIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD* 113
            ++GE ACSYA +IL DEGIA+TAD IATL+K A V ++S+WP LFAK+AEK+N+ DLI N    G       A  A A GG AAAAPAAEEKKK+EP EESD D+GFGLFD*
Sbjct:    3 TVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLIMNVG-AGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD* 113
[Close]
BLAST of Vigun05g216100.1 vs. Araport11
Match: | (Symbols: RPP1A, RPP1.1 | 60S acidic ribosomal protein P1-1, RPP1 co-orthologous gene 1 | chr1:50284-50954 REVERSE LENGTH=112)

HSP 1 Score: 114.005 bits (284), Expect = 7.665e-34
Identity = 71/112 (63.39%), Postives = 84/112 (75.00%), Query Frame = 0 
Query:    2 SIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD* 113
            ++GE ACSYA +IL DEGIA+TAD IATL+K A V ++S+WP LFAK+AEK+N+ DLI N    G       A  A A GG AAAAPAAEEKKK+EP EESD D+GFGLFD*
Sbjct:    3 TVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLIMNVG-AGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD* 113
[Close]
BLAST of Vigun05g216100.1 vs. Araport11
Match: | (Symbols: RPP1A, RPP1.1 | 60S acidic ribosomal protein P1-1, RPP1 co-orthologous gene 1 | chr1:50284-50954 REVERSE LENGTH=96)

HSP 1 Score: 112.849 bits (281), Expect = 1.104e-33
Identity = 64/112 (57.14%), Postives = 77/112 (68.75%), Query Frame = 0 
Query:    2 SIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD* 113
            ++GE ACSYA +IL DEGIA+TAD IATL+K A V ++S+WP LFAK+AEK+N+ DLI N                    G   AAPAAEEKKK+EP EESD D+GFGLFD*
Sbjct:    3 TVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLIMNVG-----------------AGGGGAAPAAEEKKKDEPAEESDGDLGFGLFD* 97
The following BLAST results are available for this feature:
BLAST of Vigun05g216100.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A4D6N754|A0A4D6N754_VIGUN3.320e-71100.00Large subunit ribosomal protein LP1 OS=Vigna ungui... [more]
tr|A0A0S3SHC8|A0A0S3SHC8_PHAAN1.144e-6998.2160S acidic ribosomal protein P1 OS=Vigna angularis... [more]
tr|A0A0L9UMT8|A0A0L9UMT8_PHAAN1.144e-6998.2160S acidic ribosomal protein P1 OS=Phaseolus angul... [more]
tr|A0A1S3TD73|A0A1S3TD73_VIGRR1.144e-6998.2160S acidic ribosomal protein P1-3-like OS=Vigna ra... [more]
tr|A0A1S3TZJ4|A0A1S3TZJ4_VIGRR3.901e-3693.7560S acidic ribosomal protein P1-3-like OS=Vigna ra... [more]
tr|A0A0S3RIA3|A0A0S3RIA3_PHAAN7.442e-3692.8660S acidic ribosomal protein P1 OS=Vigna angularis... [more]
tr|A0A0L9TFC9|A0A0L9TFC9_PHAAN7.442e-3692.8660S acidic ribosomal protein P1 OS=Phaseolus angul... [more]
tr|T2DPD1|T2DPD1_PHAVU8.580e-3691.9660S acidic ribosomal protein P1-3-like protein OS=... [more]
tr|A0A4D6NHN4|A0A4D6NHN4_VIGUN1.027e-3492.04Large subunit ribosomal protein LP1 OS=Vigna ungui... [more]
tr|A0A9Q1A784|A0A9Q1A784_SALPP1.727e-3465.7960S ACIDIC RIBOSOMAL PROTEIN P1-1-RELATED OS=Salix... [more]
back to top
BLAST of Vigun05g216100.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q8LEQ0|RLA13_ARATH2.670e-3467.57Large ribosomal subunit protein P1y OS=Arabidopsis... [more]
sp|O23095|RLA12_ARATH4.342e-3357.66Large ribosomal subunit protein P1z OS=Arabidopsis... [more]
sp|Q8LCW9|RLA11_ARATH1.011e-3263.06Large ribosomal subunit protein P1w OS=Arabidopsis... [more]
sp|P52855|RLA1_MAIZE3.898e-2458.93Large ribosomal subunit protein P1 OS=Zea mays OX=... [more]
sp|P08570|RLA1_DROME4.017e-2054.63Large ribosomal subunit protein P1 OS=Drosophila m... [more]
sp|P29763|RLA1_CHLRE1.203e-1958.06Large ribosomal subunit protein P1 OS=Chlamydomona... [more]
sp|O01359|RLA1_OSCTI1.155e-1850.00Large ribosomal subunit protein P1 OS=Oscheius tip... [more]
sp|Q9HGV0|RLA1_ASPFU5.544e-1755.75Large ribosomal subunit protein P1 OS=Aspergillus ... [more]
sp|P49148|RLA1_ALTAL6.788e-1749.56Large ribosomal subunit protein P1 OS=Alternaria a... [more]
sp|P05386|RLA1_HUMAN1.098e-1652.68Large ribosomal subunit protein P1 OS=Homo sapiens... [more]
back to top
BLAST of Vigun05g216100.1 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs arabidopsis Araport11)
Total hits: 9
Match NameE-valueIdentityDescription
|1.134e-3654.78Symbols: no symbol available | no full name availa... [more]
|2.024e-3567.86Symbols: RPP1C, RPP1.3 | 60S acidic ribosomal prot... [more]
|2.024e-3567.86Symbols: RPP1C, RPP1.3 | 60S acidic ribosomal prot... [more]
|3.291e-3458.04Symbols: RPP1B, RPP1.2 | 60S acidic ribosomal prot... [more]
|3.291e-3458.04Symbols: RPP1B, RPP1.2 | 60S acidic ribosomal prot... [more]
|7.665e-3463.39Symbols: RPP1A, RPP1.1 | 60S acidic ribosomal prot... [more]
|7.665e-3463.39Symbols: RPP1A, RPP1.1 | 60S acidic ribosomal prot... [more]
|7.665e-3463.39Symbols: RPP1A, RPP1.1 | 60S acidic ribosomal prot... [more]
|1.104e-3357.14Symbols: RPP1A, RPP1.1 | 60S acidic ribosomal prot... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Vigna unguiculata L. Walp IT97K-499-35 genome v1.2
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:1.10.10.1410:FF:000001coord: 1..63
e-value: 1.2E-26
score: 94.1
NoneNo IPR availablePFAMPF00428Ribosomal_60scoord: 22..111
e-value: 4.2E-25
score: 99.4
NoneNo IPR availablePANTHERPTHR4569660S ACIDIC RIBOSOMAL PROTEIN P1coord: 1..112
NoneNo IPR availableCDDcd05831Ribosomal_P1coord: 5..111
e-value: 3.94565E-24
score: 86.6067
IPR038716Large ribosomal subunit protein P1/P2, N-terminal domainGENE3D1.10.10.1410coord: 1..62
e-value: 1.8E-25
score: 90.5
IPR027534Large ribosomal subunit protein P1/P2HAMAPMF_01478Ribosomal_L12_archcoord: 6..112
score: 15.097976

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2; Name=Vigun05g216100.1; organism=Vigna unguiculata; type=mRNA; length=339bp
ATGTCGATCGGCGAGACTGCTTGTTCATACGCATCACTCATCCTTCATGA
TGAAGGAATCGCCGTCACTGCGGACAGTATCGCCACCTTGTTGAAAACTG
CGAAGGTTCAAGTCGATTCTTTTTGGCCCGCATTGTTTGCTAAACTTGCC
GAGAAGAAAAATCTTGGCGATTTGATAGCAAATGCCGCAGGCGGTGGGGC
ACCGGTTGCCGTTGCAGCTGCCCCAGTTGCTGCTGCTGGGGGAGGTGCTG
CCGCAGCCGCCCCTGCTGCTGAGGAGAAAAAGAAGGAAGAACCTGAAGAA
GAGAGTGATGATGATATGGGATTCGGCTTGTTCGATTAG
back to top

protein sequence of drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2

>drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2; Name=drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2; organism=Vigna unguiculata; type=polypeptide; length=113bp
MSIGETACSYASLILHDEGIAVTADSIATLLKTAKVQVDSFWPALFAKLA
EKKNLGDLIANAAGGGAPVAVAAAPVAAAGGGAAAAAPAAEEKKKEEPEE
ESDDDMGFGLFD*
back to top

mRNA from alignment at Vu05:40806131..40807640-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2; Name=Vigun05g216100.1; organism=Vigna unguiculata; type=mRNA; length=1510bp; location=Sequence derived from: Vu05:40806131..40807640- (Vigna unguiculata
TAGACTCAGAGTGGCCAAGGGTTAATAAAATGGGCTCGAGACCACCAGGC
CCATTAACCGGTTTATCAGTTCTTAAATCTCAAACCCTAGGGAGGCTTTC
CATTCCGGTTGGTTGCGCGTCTCCGTTCGTCGTTCGCTGCGCATCTCCGA
TCTGTTATTGCTGAAGGTAAACCCTTTCGATGTTTCATCTTCAACGATTT
GATTTCGTTTCAATGTTTCGCTTTTTCAAATGAATATCGTTCTTGACTGT
GTCATTCTGGTTTGTATGGTGTCCTGCAGTGTGAAAATGTCGATCGGCGA
GACTGCTTGTTCATACGCATCACTCATCCTTCATGATGAAGGAATCGCCG
TCACTGTATCCTTTTGTGTTTCCATAGGTTCACAGTTGATGAATTGTAAG
TGGATGTTTGAAACAATGTATATTGTTTCATTTTTTTATTGTTGTATTGG
ATTTTTTGATAATTGAAGTACATAAAATTGGGATTAAAGCAAAGCAGAGG
TTGATCTTTCGGAATAAGAAAGTTCAAATCTTTTGATTCTGTTATTGTTT
TTATGTTGAGTAATGTAGGTCTGATTTGACCGGTGTTTTATAGTTTAGAA
TCCTTTAGAAACAATTTATACACTGATGGAAGTGGCGTTGGATTAGGCCA
TGTTGCAGTTATGGTGTGAACAGAAGATTTTTGACGGTAGAGAGTGGTTC
CTATGACGTTATTTCATTTTAATTTAATAATTGTTGTCTGGCTAAGTGAG
TCTAATCAATTACGTATGTGTTGGGACATAAATACTGGGTTTTAGCGTTT
AATCACAAATGAATTTGTTTGGCTATGTTGTTTTTTCCTTAAGTAATGAA
TAGGCGGACAGTATCGCCACCTTGTTGAAAACTGCGAAGGTTCAAGTCGA
TTCTTTTTGGCCCGCATTGTTTGCTAAACTTGCCGAGAAGAAAAATCTTG
GCGATTTGATAGCAAATGCCGCAGGCGGTGGGGCACCGGTTGCCGTTGCA
GCTGCCCCAGTTGCTGCTGCTGGGGGAGGTGCTGCCGCAGCCGCCCCTGC
TGCTGAGGAGAAAAAGAAGGTAACCCTTTTGAAATTCTTGTTCCTGCAAC
TTTTGTTCATCCTTTTGTCAGCTTGTGGTCAACTAATTTGTATCTGTTAA
AATTTTATAGGAAGAACCTGAAGAAGAGAGTGATGATGATATGGGATTCG
GCTTGTTCGATTAGCGACTTTTTCAAATGTCAATTTTGTGGTTACCTTAC
GGATATTTTAGGTTTTGTTTTTTGTGCTGGTTATTTATCTTTGTACGACT
TGATTTTGTAGTACTATGAACTTTCGAATGTGGGTTTATGTTCATTAGAG
AAATCTGATGGTAGAAGTGTTTACGTTACATTTTTTTCTTGCCTATTATT
TTTGCCTCCATTGTTTTCTTGTTTTACCTCTCATTGTCCCTTAATTTTTT
TTTGTGCCTGACCCCAAAATTTCCACATTGGATTTGTTTGTACGTTGTTT
TGGTTCACGT
back to top

Coding sequence (CDS) from alignment at Vu05:40806131..40807640-

>drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun05g216100.1.v1.2; Name=Vigun05g216100.1; organism=Vigna unguiculata; type=CDS; length=339bp; location=Sequence derived from: Vu05:40806131..40807640- (Vigna unguiculata
ATGTCGATCGGCGAGACTGCTTGTTCATACGCATCACTCATCCTTCATGA
TGAAGGAATCGCCGTCACTGCGGACAGTATCGCCACCTTGTTGAAAACTG
CGAAGGTTCAAGTCGATTCTTTTTGGCCCGCATTGTTTGCTAAACTTGCC
GAGAAGAAAAATCTTGGCGATTTGATAGCAAATGCCGCAGGCGGTGGGGC
ACCGGTTGCCGTTGCAGCTGCCCCAGTTGCTGCTGCTGGGGGAGGTGCTG
CCGCAGCCGCCCCTGCTGCTGAGGAGAAAAAGAAGGAAGAACCTGAAGAA
GAGAGTGATGATGATATGGGATTCGGCTTGTTCGATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR038716P1/P2_N_sf
IPR027534Ribosomal_P1/P2
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation