Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2.exon.2 drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2.exon.2 Vigna unguiculata exon drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2.exon.1 drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2.exon.1 Vigna unguiculata exon
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2.three_prime_UTR.2 drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2.three_prime_UTR.2 Vigna unguiculata three_prime_UTR drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2.three_prime_UTR.1 drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2.three_prime_UTR.1 Vigna unguiculata three_prime_UTR
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2.CDS.1 drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2.CDS.1 Vigna unguiculata CDS
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2.five_prime_UTR.1 drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2.five_prime_UTR.1 Vigna unguiculata five_prime_UTR
The following polypeptide feature(s) derives from this mRNA:
Feature Name Unique Name Species Type
drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2 drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2 Vigna unguiculata polypeptide drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2 drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2-protein Vigna unguiculata polypeptide
Homology
BLAST of Vigun01g039700.1 vs. ExPASy TrEMBL (2024)
Match:
tr|A0A4D6M5E0|A0A4D6M5E0_VIGUN (Arabinogalactan peptide OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g503 PE=4 SV=1)
HSP 1 Score: 119.013 bits (297), Expect = 1.074e-33
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
Query: 1 MASPKLMFMSLTTILLLLTVFSATVSAQSSPTPAPDAGAAGSVSGSAVTVGAAVVLSMLAIFKQ 64
MASPKLMFMSLTTILLLLTVFSATVSAQSSPTPAPDAGAAGSVSGSAVTVGAAVVLSMLAIFKQ
Sbjct: 1 MASPKLMFMSLTTILLLLTVFSATVSAQSSPTPAPDAGAAGSVSGSAVTVGAAVVLSMLAIFKQ 64
BLAST of Vigun01g039700.1 vs. ExPASy TrEMBL (2024)
Match:
tr|A0A0R0G6S5|A0A0R0G6S5_SOYBN (Transmembrane protein OS=Glycine max OX=3847 GN=GLYMA_15G272800 PE=4 SV=1)
HSP 1 Score: 79.337 bits (194), Expect = 4.684e-18
Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 0
Query: 1 MASPKLMFMSLTTILLLLTVFSATVSAQSSPTPAPDAGAAGSVSGSAVTVGAAVVLSMLAIFKQ 64
M S K MFMSL ++L + +FSATVSAQ SPTPAPD GAAG+VS SA +GAAVV++MLAIFK
Sbjct: 1 MESTKSMFMSLA-VILFIALFSATVSAQGSPTPAPDGGAAGTVSSSASMIGAAVVITMLAIFKH 63
BLAST of Vigun01g039700.1 vs. ExPASy TrEMBL (2024)
Match:
tr|A0A445GZ33|A0A445GZ33_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_042214 PE=4 SV=1)
HSP 1 Score: 63.929 bits (154), Expect = 6.895e-12
Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 0
Query: 1 MASPKLMFMSLTTILLLLTVFSATVSAQSSPTPAPDAGAAGSVSGSAVTVGAAV 54
M S K MFMSL ++L + +FSATVSAQ SPTPAPD GAAG+VS SA +GAA+
Sbjct: 1 MESTKSMFMSLA-VILFIALFSATVSAQGSPTPAPDGGAAGTVSSSASMIGAAI 53
BLAST of Vigun01g039700.1 vs. ExPASy TrEMBL (2024)
Match:
tr|A0A4D6M4V7|A0A4D6M4V7_VIGUN (Arabinogalactan peptide OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g245 PE=4 SV=1)
HSP 1 Score: 59.3066 bits (142), Expect = 5.339e-10
Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 0
Query: 1 MASPKLMFMSLTTILLLLTVFSATVSAQ---SSPTPAPDAGAAGSVSGSAVTVGAAVVLSMLAIFKQ 64
MAS L F S ++L++ +F A SAQ ++P P PDAGAAGSVS S +GA++VLSMLAIFK
Sbjct: 1 MASQTLSFNSFA-VVLVVALFFAVASAQDLSTAPAPGPDAGAAGSVSSSMAVIGASIVLSMLAIFKH 66
BLAST of Vigun01g039700.1 vs. ExPASy TrEMBL (2024)
Match:
tr|A0A445GZ65|A0A445GZ65_GLYSO (Transmembrane protein OS=Glycine soja OX=3848 GN=D0Y65_042212 PE=4 SV=1)
HSP 1 Score: 56.9954 bits (136), Expect = 3.800e-9
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0
Query: 1 MASPKLMFMSLTTILLLLTVFSATVSAQS---SPTPAPDAGAAGSVSGSAVTVGAAVVLSMLAIFKQ 64
MAS + F S T++++ F+A SAQ +P P PDAGAAGSVS S +GA+VVLSMLAIFK
Sbjct: 1 MASQAITFKSFATVIIVALFFAAAASAQDLSPAPAPGPDAGAAGSVSSSVAVIGASVVLSMLAIFKH 67
BLAST of Vigun01g039700.1 vs. ExPASy TrEMBL (2024)
Match:
tr|A0A445GZC2|A0A445GZC2_GLYSO (Transmembrane protein OS=Glycine soja OX=3848 GN=D0Y65_042211 PE=4 SV=1)
HSP 1 Score: 56.6102 bits (135), Expect = 5.041e-9
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 0
Query: 1 MASPKLMFMSLTTILLLLTVFSATVSAQSSPTPA--PDAGAAGSVSGSAVTVGAAVVLSMLAIFKQ 64
MAS F S L++ F+A ++ SP PA PDAGAAGSVS S +GA+VVLSM AIFK
Sbjct: 1 MASQATSFKSFVIALIVALFFAAAIAQDLSPAPAQGPDAGAAGSVSSSVAVIGASVVLSMFAIFKH 66
BLAST of Vigun01g039700.1 vs. ExPASy TrEMBL (2024)
Match:
tr|A0A0L9UKH4|A0A0L9UKH4_PHAAN (Transmembrane protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g086700 PE=4 SV=1)
HSP 1 Score: 55.8398 bits (133), Expect = 9.564e-9
Identity = 31/54 (57.41%), Postives = 39/54 (72.22%), Query Frame = 0
Query: 14 ILLLLTVFSATVSAQS---SPTPAPDAGAAGSVSGSAVTVGAAVVLSMLAIFKQ 64
++L++ +F A SAQ +P P PDAGAAGSVS S +GA+VVLSMLAIFK
Sbjct: 10 VVLVVALFFAVASAQDLSPAPAPGPDAGAAGSVSSSMAVIGASVVLSMLAIFKH 63
BLAST of Vigun01g039700.1 vs. ExPASy TrEMBL (2024)
Match:
tr|A0A0S3SIQ1|A0A0S3SIQ1_PHAAN (PGG domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G154300 PE=4 SV=1)
HSP 1 Score: 56.9954 bits (136), Expect = 1.779e-8
Identity = 31/54 (57.41%), Postives = 39/54 (72.22%), Query Frame = 0
Query: 14 ILLLLTVFSATVSAQS---SPTPAPDAGAAGSVSGSAVTVGAAVVLSMLAIFKQ 64
++L++ +F A SAQ +P P PDAGAAGSVS S +GA+VVLSMLAIFK
Sbjct: 76 VVLVVALFFAVASAQDLSPAPAPGPDAGAAGSVSSSMAVIGASVVLSMLAIFKH 129
BLAST of Vigun01g039700.1 vs. ExPASy TrEMBL (2024)
Match:
tr|A0A072UUZ2|A0A072UUZ2_MEDTR (Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=MTR_3g028465 PE=4 SV=1)
HSP 1 Score: 55.0694 bits (131), Expect = 2.439e-8
Identity = 37/70 (52.86%), Postives = 44/70 (62.86%), Query Frame = 0
Query: 1 MASPKLMFMSLTTILLLLTVFSATV-SAQS-----SPTPAPDAGAAGSVSGSAVTVGAAVVLSMLAIFKQ 64
MAS + F S L+ +F+ATV SAQ +P P PDAGAAGSV+ S VG +VVLSMLAIFK
Sbjct: 1 MASSAIKFFSF----FLVIIFAATVASAQDLSPSLAPAPGPDAGAAGSVTSSVAMVGISVVLSMLAIFKH 66
BLAST of Vigun01g039700.1 vs. ExPASy TrEMBL (2024)
Match:
tr|A0A396IN19|A0A396IN19_MEDTR (Transmembrane protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr3g0088031 PE=4 SV=1)
HSP 1 Score: 53.9138 bits (128), Expect = 4.822e-8
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 0
Query: 15 LLLLTVFSATV-SAQS-----SPTPAPDAGAAGSVSGSAVTVGAAVVLSMLAIFKQ 64
L+ +F+ATV SAQ +P P PDAGAAGS++ SA +G ++VLSMLAIFK
Sbjct: 6 FFLVIIFAATVASAQDLSPSLAPAPGPDAGAAGSITSSAAMIGVSIVLSMLAIFKH 61
The following BLAST results are available for this feature:
BLAST of Vigun01g039700.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (
Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt TrEMBL )
Total hits: 10
A T G G C A T C A C C A A A A C T C A T G T T C A T G T C T C T C A C C A C C A T C C T C C T C C T C C T C A C G G T G T T C T C C G C C A C T G T G T C C G C C C A G A G C T C C C C A A C T C C C G C T C C T G A C G C C G G C G C A G C C G G A T C A G T T T C C G G C T C C G C C G T G A C G G T A G G A G C T G C G G T T G T C T T G T C C A T G C T T G C C A T C T T C A A G C A A T G A 20 40 60 80 100 120 140 160 180 Expect = 1.07e-33 / Id = 100.00 Expect = 4.68e-18 / Id = 67.19 Expect = 6.89e-12 / Id = 64.81 Expect = 5.34e-10 / Id = 53.73 Expect = 3.80e-9 / Id = 53.73 Expect = 5.04e-9 / Id = 51.52 Expect = 9.56e-9 / Id = 57.41 Expect = 1.78e-8 / Id = 57.41 Expect = 2.44e-8 / Id = 52.86 Expect = 4.82e-8 / Id = 53.57 Sequence tr|A0A4D6M5E0|A0A4D6M5E0_VIGUN tr|A0A0R0G6S5|A0A0R0G6S5_SOYBN tr|A0A445GZ33|A0A445GZ33_GLYSO tr|A0A4D6M4V7|A0A4D6M4V7_VIGUN tr|A0A445GZ65|A0A445GZ65_GLYSO tr|A0A445GZC2|A0A445GZC2_GLYSO tr|A0A0L9UKH4|A0A0L9UKH4_PHAAN tr|A0A0S3SIQ1|A0A0S3SIQ1_PHAAN tr|A0A072UUZ2|A0A072UUZ2_MEDTR tr|A0A396IN19|A0A396IN19_MEDTR back to top
Sequences
The
following sequences are available for this feature:
mRNA sequence
>drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2; Name=Vigun01g039700.1; organism=Vigna unguiculata; type=mRNA; length=195bp back to top protein sequence of drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2
>drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2; Name=drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2; organism=Vigna unguiculata; type=polypeptide; length=65bp back to top mRNA from alignment at Vu01:5444510..5445089-
Legend: exon five_prime_UTR CDS polypeptide three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2; Name=Vigun01g039700.1; organism=Vigna unguiculata; type=mRNA; length=580bp; location=Sequence derived from: Vu01:5444510..5445089- (Vigna unguiculataCCACCTTCCACTGTTCTACTCTCCATCTTAACATCTTCAACCTAATCTCT
CATTTTTCTCTCTCTTCACTTTCCC ATGGCATCACCAAAACTCATGTTCA
TGTCTCTCACCACCATCCTCCTCCTCCTCACGGTGTTCTCCGCCACTGTG
TCCGCCCAGAGCTCCCCAACTCCCGCTCCTGACGCCGGCGCAGCCGGATC
AGTTTCCGGCTCCGCCGTGACGGTAGGAGCTGCGGTTGTCTTGTCCATGC
TTGCCATCTTCAAGCAATGA GTCCATTCATGTTGTGTGGTTTCGTTTCTA
TTATACAGTTTGATTTGATTCAGTGATGATTATG GTGATAGGGAGAAATAATTCACAAAGGATCTT
TTTCTTTGTCATGTTTATTCTTTTTCGAGGCTTTCTTGTATAATTATTAT
AAATATATATCATGTGTTTGTTCATTTTGTTTCGGTGTGTTTTGTTTTCA
CTTTTTCTTTTTTGTGTATACCGTATAAGG back to top Coding sequence (CDS) from alignment at Vu01:5444510..5445089-
>drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun01g039700.1.v1.2; Name=Vigun01g039700.1; organism=Vigna unguiculata; type=CDS; length=195bp; location=Sequence derived from: Vu01:5444510..5445089- (Vigna unguiculata back to top
