Vigun01g016700.5

Transcript Overview


Name	Vigun01g016700.5
Unique Name	drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2
Type	mRNA
Organism	Vigna unguiculata (cowpea)
Sequence length	564

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Vu01	chromosome	Vu01:1826894..1831007 -	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	2024-07-03
InterProScan Analysis for Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	2024-08-19
Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt TrEMBL	2024-08-19
Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt Swissprot	2024-08-19
Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs arabidopsis Araport11	2024-08-19

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
avjvunL420	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anvunL0747	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ccavunL065	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
carvunL305	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
psvunL368	Pisum sativum Cameor genome v1a	Pisum sativum
vrvvunL307	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vssvunL570	Vicia sativa cv. Studenica genome v1.0	Vicia sativa

Orthologs


Gene/Transcript	Assembly	Species
rna-TanjilR_02831	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
evm.Ca_v2.0_12263	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
Va05G017750.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Cc_v2.0_24978.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
Psat5g223440.1	Pisum sativum Cameor genome v1a	Pisum sativum
rna-XM_014644804.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
jg21251.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Vigun01g016700	drVigUngu.IT97K.1.2.Vigun01g016700.v1.2	Vigna unguiculata	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.exon.4	drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.exon.4	Vigna unguiculata	exon
drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.exon.3	drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.exon.3	Vigna unguiculata	exon
drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.exon.2	drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.exon.2	Vigna unguiculata	exon
drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.exon.1	drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.exon.1	Vigna unguiculata	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.three_prime_UTR.1	drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.three_prime_UTR.1	Vigna unguiculata	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.CDS.2	drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.CDS.2	Vigna unguiculata	CDS
drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.CDS.1	drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.CDS.1	Vigna unguiculata	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.five_prime_UTR.3	drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.five_prime_UTR.3	Vigna unguiculata	five_prime_UTR
drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.five_prime_UTR.2	drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.five_prime_UTR.2	Vigna unguiculata	five_prime_UTR
drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.five_prime_UTR.1	drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2.five_prime_UTR.1	Vigna unguiculata	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2	drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2	Vigna unguiculata	polypeptide
drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2	drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2-protein	Vigna unguiculata	polypeptide

Homology

[Close]

BLAST of Vigun01g016700.5 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6M692|A0A4D6M692_VIGUN (Ribosomal protein L18/L5 OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g207 PE=3 SV=1)

HSP 1 Score: 390.578 bits (1002), Expect = 2.336e-137
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0

Query:    1 MLKQAIGRTCRTSAHAFEGNRVLPWIYVPSCFFHNGQAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD 187
            MLKQAIGRTCRTSAHAFEGNRVLPWIYVPSCFFHNGQAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD
Sbjct:    1 MLKQAIGRTCRTSAHAFEGNRVLPWIYVPSCFFHNGQAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD 187

[Close]

BLAST of Vigun01g016700.5 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SUE1|A0A0S3SUE1_PHAAN (L18 ribosomal protein Heart Stopper OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G340400 PE=3 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 1.197e-131
Identity = 180/187 (96.26%), Postives = 183/187 (97.86%), Query Frame = 0

Query:    1 MLKQAIGRTCRTSAHAFEGNRVLPWIYVPSCFFHNGQAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD 187
            MLKQ IGRTCRTSA+AFE NRVLPWIY+P C FHNG+AHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD
Sbjct:    1 MLKQIIGRTCRTSAYAFEENRVLPWIYLPLCLFHNGRAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD 187

[Close]

BLAST of Vigun01g016700.5 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0L0H2|A0A8T0L0H2_PHAAN (L18 ribosomal protein Heart Stopper OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0187620 PE=3 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 1.197e-131
Identity = 180/187 (96.26%), Postives = 183/187 (97.86%), Query Frame = 0

Query:    1 MLKQAIGRTCRTSAHAFEGNRVLPWIYVPSCFFHNGQAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD 187
            MLKQ IGRTCRTSA+AFE NRVLPWIY+P C FHNG+AHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD
Sbjct:    1 MLKQIIGRTCRTSAYAFEENRVLPWIYLPLCLFHNGRAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD 187

[Close]

BLAST of Vigun01g016700.5 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3U2Q3|A0A1S3U2Q3_VIGRR (Uncharacterized protein LOC106761271 OS=Vigna radiata var. radiata OX=3916 GN=LOC106761271 PE=3 SV=1)

HSP 1 Score: 375.17 bits (962), Expect = 3.830e-131
Identity = 180/187 (96.26%), Postives = 183/187 (97.86%), Query Frame = 0

Query:    1 MLKQAIGRTCRTSAHAFEGNRVLPWIYVPSCFFHNGQAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD 187
            MLKQ IGRTCRTSA+AFEGNRVLP IYVPSC FHNG+A MAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIS+GKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD
Sbjct:    1 MLKQIIGRTCRTSAYAFEGNRVLPLIYVPSCLFHNGRADMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISVGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD 187

[Close]

BLAST of Vigun01g016700.5 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SIT6|A0A0S3SIT6_PHAAN (L18 ribosomal protein Heart Stopper OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G161500 PE=3 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 4.718e-131
Identity = 181/187 (96.79%), Postives = 183/187 (97.86%), Query Frame = 0

Query:    1 MLKQAIGRTCRTSAHAFEGNRVLPWIYVPSCFFHNGQAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD 187
            MLKQ IG TCRTSA+AFEGNRVLP IYVPSC FHNG+AHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD
Sbjct:    1 MLKQIIGGTCRTSAYAFEGNRVLPSIYVPSCLFHNGRAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD 187

[Close]

BLAST of Vigun01g016700.5 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9UK59|A0A0L9UK59_PHAAN (L18 ribosomal protein Heart Stopper OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g075700 PE=3 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 4.718e-131
Identity = 181/187 (96.79%), Postives = 183/187 (97.86%), Query Frame = 0

Query:    1 MLKQAIGRTCRTSAHAFEGNRVLPWIYVPSCFFHNGQAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD 187
            MLKQ IG TCRTSA+AFEGNRVLP IYVPSC FHNG+AHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD
Sbjct:    1 MLKQIIGGTCRTSAYAFEGNRVLPSIYVPSCLFHNGRAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD 187

[Close]

BLAST of Vigun01g016700.5 vs. ExPASy TrEMBL (2024)
Match: tr|V7BJP2|V7BJP2_PHAVU (L18 ribosomal protein Heart Stopper OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G019000g PE=3 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 7.815e-131
Identity = 179/187 (95.72%), Postives = 183/187 (97.86%), Query Frame = 0

Query:    1 MLKQAIGRTCRTSAHAFEGNRVLPWIYVPSCFFHNGQAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD 187
            MLKQAIGR CRTSA+AFEGNRVLPWI V SCFFHNGQ HMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNP+KHISFKQRTIAYMEPFTLDVFISKRFVSASLTHR+TSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID+KVYLD
Sbjct:    1 MLKQAIGRICRTSAYAFEGNRVLPWIRVASCFFHNGQTHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPHKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRMTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKVYLD 187

[Close]

BLAST of Vigun01g016700.5 vs. ExPASy TrEMBL (2024)
Match: tr|T2DNX0|T2DNX0_PHAVU (L18 ribosomal protein Heart Stopper OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 373.244 bits (957), Expect = 1.839e-130
Identity = 178/187 (95.19%), Postives = 184/187 (98.40%), Query Frame = 0

Query:    1 MLKQAIGRTCRTSAHAFEGNRVLPWIYVPSCFFHNGQAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD 187
            MLKQAIGR CRTSA+AFEGNRVLP I+VPSCFFHNGQ HMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNP+KHISFKQRTIAYMEPFTLDVFISKRFVSASLTHR+TSKQVAVAGTNSKDIKAVLRSRSDIPACIS+GKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID+KVYLD
Sbjct:    1 MLKQAIGRICRTSAYAFEGNRVLPCIHVPSCFFHNGQTHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPHKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRMTSKQVAVAGTNSKDIKAVLRSRSDIPACISVGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKVYLD 187

[Close]

BLAST of Vigun01g016700.5 vs. ExPASy TrEMBL (2024)
Match: tr|V7BW65|V7BW65_PHAVU (L18 ribosomal protein Heart Stopper OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G016700g PE=3 SV=1)

HSP 1 Score: 371.318 bits (952), Expect = 1.188e-129
Identity = 177/187 (94.65%), Postives = 183/187 (97.86%), Query Frame = 0

Query:    1 MLKQAIGRTCRTSAHAFEGNRVLPWIYVPSCFFHNGQAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD 187
            MLKQAIGR CRTSA+AFEGNRV P I+VPSCFFHNGQ HMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNP+KHISFKQRTIAYMEPFTLDVFISKRFVSASLTHR+TSKQVAVAGTNSKDIKAVLRSRSDIPACIS+GKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID+KVYLD
Sbjct:    1 MLKQAIGRICRTSAYAFEGNRVFPCIHVPSCFFHNGQTHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPHKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRMTSKQVAVAGTNSKDIKAVLRSRSDIPACISVGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKVYLD 187

[Close]

BLAST of Vigun01g016700.5 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0I9RJ76|A0A0I9RJ76_LOTJA (L18 ribosomal protein Heart Stopper OS=Lotus japonicus OX=34305 GN=Heart Stopper PE=2 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 1.343e-128
Identity = 173/187 (92.51%), Postives = 182/187 (97.33%), Query Frame = 0

Query:    1 MLKQAIGRTCRTSAHAFEGNRVLPWIYVPSCFFHNGQAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD 187
            MLKQA GR CRTSA+  EGNRVLPWIYVPSCFFHNGQ HMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKH+SFKQRT+A+MEPFTLDVFISKRFVSAS+THRVTSKQVAVAGTNSKDIKAVLRSRSDIPACI+IG+IL+ERAREADVYTASYTPR+RDKFEGKIRAVVQSLIDNGIDIKVYLD
Sbjct:    1 MLKQAFGRICRTSAYTCEGNRVLPWIYVPSCFFHNGQVHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHVSFKQRTVAFMEPFTLDVFISKRFVSASVTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIGRILAERAREADVYTASYTPRDRDKFEGKIRAVVQSLIDNGIDIKVYLD 187

[Close]

BLAST of Vigun01g016700.5 vs. Araport11
Match: | (Symbols: uL18-L5, HES | Heartstopper | chr1:2839855-2840955 FORWARD LENGTH=189)

HSP 1 Score: 298.516 bits (763), Expect = 1.839e-104
Identity = 144/190 (75.79%), Postives = 165/190 (86.84%), Query Frame = 0

Query:    1 MLKQAIGRTCRTSAHAFEGNR--VLPWIYVPSCFFHNGQAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD* 188
            MLKQ + +     A  +  NR  + P++   SC FHNG+   APRSFFGVED++DDD SRPYTYQK KKSKNP+KH+SFKQRT+AYMEPFTLDVFISKRFVSASLTHRVT +QVAVAGTNSKD+KAVLRSR DIPAC+SIG+ILSERA+EADVYTASYTPR++DKFEGKIRAVVQSLIDNGID+K+YLD*
Sbjct:    1 MLKQVVAKYSIGKAAIYGSNREKLRPFMCQTSCRFHNGRTVFAPRSFFGVEDYVDDDTSRPYTYQKEKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGIDVKIYLD* 190

[Close]

Query:    1 MLKQAIGRTCRTSAHAFEGNR--VLPWIYVPSCFFHNGQAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD* 188
            MLKQ + +     A  +  NR  + P++   SC FHNG+   APRSFFGVED++DDD SRPYTYQK KKSKNP+KH+SFKQRT+AYMEPFTLDVFISKRFVSASLTHRVT +QVAVAGTNSKD+KAVLRSR DIPAC+SIG+ILSERA+EADVYTASYTPR++DKFEGKIRAVVQSLIDNGID+K+YLD*
Sbjct:    1 MLKQVVAKYSIGKAAIYGSNREKLRPFMCQTSCRFHNGRTVFAPRSFFGVEDYVDDDTSRPYTYQKEKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGIDVKIYLD* 190

[Close]

BLAST of Vigun01g016700.5 vs. Araport11
Match: | (Symbols: uL18-L5, HES | Heartstopper | chr1:2838789-2840955 FORWARD LENGTH=234)

HSP 1 Score: 299.671 bits (766), Expect = 2.828e-104
Identity = 144/190 (75.79%), Postives = 165/190 (86.84%), Query Frame = 0

Query:    1 MLKQAIGRTCRTSAHAFEGNR--VLPWIYVPSCFFHNGQAHMAPRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD* 188
            MLKQ + +     A  +  NR  + P++   SC FHNG+   APRSFFGVED++DDD SRPYTYQK KKSKNP+KH+SFKQRT+AYMEPFTLDVFISKRFVSASLTHRVT +QVAVAGTNSKD+KAVLRSR DIPAC+SIG+ILSERA+EADVYTASYTPR++DKFEGKIRAVVQSLIDNGID+K+YLD*
Sbjct:   46 MLKQVVAKYSIGKAAIYGSNREKLRPFMCQTSCRFHNGRTVFAPRSFFGVEDYVDDDTSRPYTYQKEKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGIDVKIYLD* 235

[Close]

BLAST of Vigun01g016700.5 vs. Araport11
Match: | (Symbols: uL18-L4 | | chr3:7055639-7056679 REVERSE LENGTH=187)

HSP 1 Score: 111.309 bits (277), Expect = 8.054e-31
Identity = 54/117 (46.15%), Postives = 83/117 (70.94%), Query Frame = 0

Query:   64 KGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 180
            +G+ +K PN+  S+KQRT  YM PF L+VF S++F+ A + HR TSK ++VA TN++DI+  + S  D  AC  IGK+++ER+ EADVY  SY PR+ ++ EGK+  V+ ++ ++GI
Sbjct:   68 RGEAAKRPNRK-SWKQRTDMYMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATTNARDIRTNIPSLVDNEACRLIGKLIAERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKEHGI 183

[Close]

BLAST of Vigun01g016700.5 vs. Araport11
Match: | (Symbols: uL18-L1 | | chr3:7962443-7963378 FORWARD LENGTH=311)

HSP 1 Score: 90.1225 bits (222), Expect = 1.064e-21
Identity = 52/114 (45.61%), Postives = 78/114 (68.42%), Query Frame = 0

Query:   69 KNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDI 182
            K   +  +F Q T  +  PF LD++ISK  V A + HRVTSK V VA + SKD+K  L SR ++ AC ++G +L++R+ E D++   YTPR+ DK EGK++ V+Q+LIDNG+++
Sbjct:  179 KKRERTFTFNQLTAPFHYPFCLDIYISKESVRACVIHRVTSKVVTVAHSISKDMKFDLGSRRNVAACAAVGAVLAQRSLEDDIHDVIYTPRKGDKIEGKLQVVLQALIDNGVNV 292

[Close]

Query:   69 KNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDI 182
            K   +  +F Q T  +  PF LD++ISK  V A + HRVTSK V VA + SKD+K  L SR ++ AC ++G +L++R+ E D++   YTPR+ DK EGK++ V+Q+LIDNG+++
Sbjct:  179 KKRERTFTFNQLTAPFHYPFCLDIYISKESVRACVIHRVTSKVVTVAHSISKDMKFDLGSRRNVAACAAVGAVLAQRSLEDDIHDVIYTPRKGDKIEGKLQVVLQALIDNGVNV 292

[Close]

BLAST of Vigun01g016700.5 vs. Araport11
Match: | (Symbols: uL18m | | chr5:9860584-9860928 FORWARD LENGTH=114)

HSP 1 Score: 56.225 bits (134), Expect = 2.103e-10
Identity = 27/103 (26.21%), Postives = 53/103 (51.46%), Query Frame = 0

Query:   80 RTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDI 182
            R   Y++P+ L +  + +FV A + H  T+     A +  K ++  +    D+ A   IGKIL ER    D+   +   ++  ++ GK++AV+ S+ + G+ +
Sbjct:   11 RLFDYLKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALRETMDITRDVAAASKIGKILGERLLMKDIPAVTIQMKKEQRYHGKVKAVIDSVREAGVKL 113

The following BLAST results are available for this feature:

BLAST of Vigun01g016700.5 vs. ExPASy TrEMBL (2024)
BLAST of Vigun01g016700.5 vs. ExPASy TrEMBL (2024)
BLAST of Vigun01g016700.5 vs. Araport11

BLAST of Vigun01g016700.5 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A4D6M692\|A0A4D6M692_VIGUN	2.336e-137	100.00	Ribosomal protein L18/L5 OS=Vigna unguiculata OX=3...	[more]
tr\|A0A0S3SUE1\|A0A0S3SUE1_PHAAN	1.197e-131	96.26	L18 ribosomal protein Heart Stopper OS=Vigna angul...	[more]
tr\|A0A8T0L0H2\|A0A8T0L0H2_PHAAN	1.197e-131	96.26	L18 ribosomal protein Heart Stopper OS=Phaseolus a...	[more]
tr\|A0A1S3U2Q3\|A0A1S3U2Q3_VIGRR	3.830e-131	96.26	Uncharacterized protein LOC106761271 OS=Vigna radi...	[more]
tr\|A0A0S3SIT6\|A0A0S3SIT6_PHAAN	4.718e-131	96.79	L18 ribosomal protein Heart Stopper OS=Vigna angul...	[more]
tr\|A0A0L9UK59\|A0A0L9UK59_PHAAN	4.718e-131	96.79	L18 ribosomal protein Heart Stopper OS=Phaseolus a...	[more]
tr\|V7BJP2\|V7BJP2_PHAVU	7.815e-131	95.72	L18 ribosomal protein Heart Stopper OS=Phaseolus v...	[more]
tr\|T2DNX0\|T2DNX0_PHAVU	1.839e-130	95.19	L18 ribosomal protein Heart Stopper OS=Phaseolus v...	[more]
tr\|V7BW65\|V7BW65_PHAVU	1.188e-129	94.65	L18 ribosomal protein Heart Stopper OS=Phaseolus v...	[more]
tr\|A0A0I9RJ76\|A0A0I9RJ76_LOTJA	1.343e-128	92.51	L18 ribosomal protein Heart Stopper OS=Lotus japon...	[more]

BLAST of Vigun01g016700.5 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt Swissprot)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Vigun01g016700.5 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs arabidopsis Araport11)
Total hits: 7


Match Name	E-value	Identity	Description
\|	1.839e-104	75.79	Symbols: uL18-L5, HES \| Heartstopper \| chr1:283985...	[more]
\|	1.839e-104	75.79	Symbols: uL18-L5, HES \| Heartstopper \| chr1:283985...	[more]
\|	2.828e-104	75.79	Symbols: uL18-L5, HES \| Heartstopper \| chr1:283878...	[more]
\|	8.054e-31	46.15	Symbols: uL18-L4 \| \| chr3:7055639-7056679 REVERSE...	[more]
\|	1.064e-21	45.61	Symbols: uL18-L1 \| \| chr3:7962443-7963378 FORWARD...	[more]
\|	1.064e-21	45.61	Symbols: uL18-L1 \| \| chr3:7962443-7963378 FORWARD...	[more]
\|	2.103e-10	26.21	Symbols: uL18m \| \| chr5:9860584-9860928 FORWARD L...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vigna unguiculata L. Walp IT97K-499-35 genome v1.2
Date Performed: 2024-08-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	FUNFAM	G3DSA:3.30.420.100:FF:000004		coord: 64..181 e-value: 2.7E-69 score: 232.6
None	No IPR available	GENE3D	3.30.420.100		coord: 64..181 e-value: 7.7E-16 score: 60.6
None	No IPR available	CDD	cd00432	Ribosomal_L18_L5e	coord: 78..180 e-value: 1.86648E-20 score: 79.8915
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 79..180
IPR005484	Large ribosomal subunit protein uL18	PFAM	PF00861	Ribosomal_L18p	coord: 66..181 e-value: 7.3E-4 score: 31.3
IPR005484	Large ribosomal subunit protein uL18	PANTHER	PTHR12899	39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL	coord: 31..183

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Vu01:1826894..1831007-
coding sequence from alignment at Vu01:1826894..1831007-

mRNA sequence

>drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2 ID=drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2; Name=Vigun01g016700.5; organism=Vigna unguiculata; type=mRNA; length=564bp
ATGTTGAAACAAGCAATTGGCAGAACTTGCAGAACCAGTGCTCATGCTTT
TGAAGGAAACAGAGTTTTGCCTTGGATATATGTGCCTTCGTGCTTTTTCC
ACAATGGACAGGCACATATGGCACCTAGAAGCTTTTTTGGGGTAGAGGAT
TTCCTCGATGATGACAATAGTCGACCTTACACATACCAAAAAGGGAAGAA
ATCAAAGAATCCAAACAAGCACATATCTTTCAAACAAAGAACGATTGCGT
ACATGGAGCCGTTTACACTTGATGTGTTTATCTCAAAACGCTTTGTATCA
GCTTCACTCACTCATAGGGTGACAAGCAAACAGGTTGCAGTTGCTGGTAC
CAACTCCAAGGACATAAAAGCTGTTCTTAGGTCTCGGTCAGACATACCAG
CATGCATATCCATCGGCAAGATTTTATCTGAAAGAGCAAGAGAAGCTGAT
GTTTACACTGCTTCCTACACTCCAAGGGAAAGGGACAAGTTTGAAGGGAA
AATCAGAGCTGTAGTTCAATCACTCATTGATAATGGGATTGATATCAAGG
TTTACCTTGATTGA

protein sequence of drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2

>drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2 ID=drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2; Name=drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2; organism=Vigna unguiculata; type=polypeptide; length=188bp
MLKQAIGRTCRTSAHAFEGNRVLPWIYVPSCFFHNGQAHMAPRSFFGVED
FLDDDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVS
ASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACISIGKILSERAREAD
VYTASYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLD*

mRNA from alignment at Vu01:1826894..1831007-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2 ID=drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2; Name=Vigun01g016700.5; organism=Vigna unguiculata; type=mRNA; length=4114bp; location=Sequence derived from: Vu01:1826894..1831007- (Vigna unguiculata
AAATTTAAATGCTTTTAAGACAGTAAAAAAGTAAAGATATTTTTGGTGGA
TAATAAACATGTTATTTATCCATTGTGGTTTAGATGACTAATTGCTCTTC
GAATTTGTGGGTATAGGAACACGCCATTGAAGCTCATTCAACATTCCACA
CAGGGGCAGGTAAATGGGTGATTGTTATTACTTTTTGTTTTCACGTTTCT
CTTGTGATTATTGGCTTCAAAGATGGTGTCTCGTTGGTTTTGATAGATTG
GTTAAAGGCTCGGAGTGGTCATAGGACTACTTAGTAACTAGGTTGGTTTA
AGGGGCAAATGGGCATTTTTCTTTTTGCCTGTTGTGTGACAAGATCGTGA
CTTTGTGTTTTGGTCACCAGGTGTTTGATAAAATGTTTGACTGACAATTG
CAATATGTTATTGCTTTGATGCGAAGAAAGTTTGTTGCCAATGCAAATTC
CAGTTTGGTTGGTTTGTTTTTGTTGATAGTGGTTTTTTTTTGTCCGGTAA
AATGTTTAGCTATGATCAGTGCTTATGTGGTATTTGGTTTATTGCATAAG
TTTGCGAGCTGTCACCTTTTCCATTTTGTGGTTTGAATTATAGTATTGGT
TTTGTTCATGTGAGAACTATGTTGCACGGGTATGGGGATTGGGTGGTTGT
ATGCTGTAATTCTGAAATTGTTGATTCCGTTTAAAGTTGTTGTCCTTTCC
GTGAGAGGTATGTGGTAAGAAGAAAGCTTTCAGTTTCTCAGGAAAAACAC
AGAGGCTTTGGGTTGTTGTATTGTAGGTGTTTCAATTTCAGTCACAGAGG
CTCTGTGCCTTTTCATCCTCGTCCCTCTCTTTCTATCTCTCTCTCTAAGG
CTTTGGCATGGATTGCTTTTAGTCTGTCCTTTAGTATTGATGTGGAAAAG
CTGTGTTAGCTACCTGCAGAGTTTTTTCTTGTGCTAATTTTAGTTTATTT
TTACAAATTTTTTTAGTGGAGTTAGGGTTTCGTTTTTTGAATATTTTGAG
TGACATTTGAATTGCTACTGGCATCCTTCAGAACTTTGGCCATATTGGAT
GCAATGCTTCACTGGGGAAAATCTTGTTTTTACACATGATGCTGTGTAAG
GCTGAACCCTTTTTCTGGGTCTTGTAGTGATTTCTTCTTTTGGATAGAAA
ACACAGGTTTCTGATTGGAGAATGAACACAATTTTTATGCATTTCAACAA
AACAGCCAAGTGCCTAAATCTCATTTCTGGTGATCTCAGATCACTCTGGC
TTCAATTCTGGTTAGTCCACTGCACTCTTGCAGAATTTTTGGAAAGTCAG
TGCTCCTTACATCTTTGCAGTCAAAATTGTGATATTCCTCATATGATTAC
TCAATTTCACTAGTTTTTATCTTAGCTGCTATCCTGATCTCCCTAAAAAA
CTAATCTAGTAGGGTTGCACGATCTTAAGTGTTGAATTAGTGTTATTGAT
GATCCCTTTGTGCAACTCACAAGGATATCTTTAGAAGTGATTCATCTGCA
AACAACCCTTGAACTTTATTTCCTTATATTTTGATATCCATTTATATTTT
CTCTATTTTATTTACTTTTTTGAATGCCTGTGCACGTCTGAATTAATAGA
TAAATTCATCACAGCCCTTAATTATCTTTTCTCCCTGTTATGTCACTCAA
GGTCAACCTTTAGGTGTTTAGGTAGATATATGAATATACTGTGGACATGG
TCTTAACTCTTAAGCATTTATCTTTGCTTCTCAAAGTAATTAAATACCCA
TGAAAAAGTGCATCTGATATTAGAGTTTACACATACCGTGGTTAGAGCTT
CATAAACTTGACTCGTACGTTAGAATCGTAAACTTGTAAGAGTTTGCTTT
GTATAAAAATGTATTAAAATATCTGTCAATAATATAATAATTTAATATTA
TATGTAATATATTATGCTATAAATAATTTTTGTATTTTTTTACTATTTTT
CTATTATCAGTTGATTGTATTATTTAATAGTTTTTTTATATTTTTCTAAT
ATTATTATACTTCTATCATTACTCTTTAGTTGATATATTATATGTATTAT
GTTCTGCATAAAAGAATGTTTTTGGACTTAAAGTGAGCCCCAACAATCCA
AAATGTCAGCAAGAGAAGATTAAAAACACGCATAAACTCTAATAGGACCC
AACTCACTAATTTTGTAGCCCAGTCTGGTGAAGACAGTCGAAACTTAAAA
CGACCTTAGAAAGACACCAACACAATCCTGTATTCCATAGGCTGTAGCAA
GCTTCAGCTAGTTAAGAGGGGATTTAGGGTTCCAGGAAACATGTTGAAAC
AAGCAATTGGCAGAACTTGCAGAACCAGTGCTCATGCTTTTGAAGGAAAC
AGAGTTTTGCCTTGGATATATGTGCCTTCGTGCTTTTTCCACAATGGACA
GGTAAAGTCTCTTATTCAAAGCACAATTTAAATTATTTTTTCAATATTTT
TCTGTAGAATTTCCTTTTTGTCTGTTTAATAAATTATAGAATTTGGTTGA
ATCTTGATTTAAGTTTCCCACTTTGGGGGAAACTTCATTGGTTTATGTGT
CAAAAACAAATGATAATGTACACTCGATTTTCATTTTGTTTCAAGTAATA
TGGTGTGATGGGCATTACTGCCTTTAATTGAAATAATTCCTTTCATAGAT
AAATTAGATAATCAGATGCTAAGCTTCAAACAAAGTATGAAATCCTGAAG
CTTATAAAGTTGTACAGGGTTAAATTGGCCTGTGATAATAAATAATTTCT
TTAGCTTTTGCATATAGCTTGGAATGAGCCTAAGTTTAATAGAAGAAATC
AAGTTTGGAAGGTCTACTACAGGAGGAATAAAATTCAGTAGTTTAGGTTT
GTGACAAACCATAACAGATGATATTATTGTGTGATATTAAAGGGCCCTGA
TTTTAAATTATTGTGAGGGGCATTGGTTGATAGTTGGAAGGGAAAAGGAT
CTATGTTGTACAACAGTTAGTTAGAGATTATTCAGCACTAGTGTGAATTC
ATTGATCCCACATATATGTGTAGTGTAATCAACTACCTAGTATAGTTTTA
CCATTCCAAGTAGCTTGTGTGGATTTTATCCAATTGAAAAATAAAGTTGA
ACAAGCCTAAAATGCCAATTTGAGGTGAATCATTTGTGTAGTATTATTAA
TACTCATTTTTAATTCATTTATTTTATACAGGCACATATGGCACCTAGAA
GCTTTTTTGGGGTAGAGGATTTCCTCGATGATGACAATAGTCGACCTTAC
ACATACCAAAAAGGGAAGAAATCAAAGAATCCAAACAAGCACATATCTTT
CAAACAAAGAACGATTGCGTACATGGAGCCGTTTACACTTGATGTGTTTA
TCTCAAAACGCTTTGTATCAGCTTCACTCACTCATAGGGTGACAAGCAAA
CAGGTTGCAGTTGCTGGTACCAACTCCAAGGACATAAAAGCTGTTCTTAG
GTCTCGGTCAGACATACCAGCATGCATATCCATCGGCAAGATTTTATCTG
AAAGAGCAAGAGAAGCTGATGTTTACACTGCTTCCTACACTCCAAGGGAA
AGGGACAAGTTTGAAGGGAAAATCAGAGCTGTAGTTCAATCACTCATTGA
TAATGGGATTGATATCAAGGTTTACCTTGATTGAGTTGAGTAGTAACTCA
AGATTTTGTGGCTATCAATTTGATATCAATTGGTGATTACTGGTTTGGTT
TTGTGGCTAGTTAGTTACCATATGCTGCTTTGATGGATAGGAAGATGGAG
AAGCATTGTTTAGGGCTAGTAATTTGGGGAAATTATGCATGAACAAAGAA
AGATCTTTCAAACTCGTGCATGCAATATGATAACTCCTGATTTCACTGTA
ACCTTAGAGGCTAAAGGGGTTTGTGTGCTGCTCAACATTTGTCATCTTCT
ATTTGTCGTTTCCTCCCTTTCACTTATTTAGCAGTGAGAGGTGTCAAAGT
GAGTCAACCTGACTCACACGAGTTGGCCCATTACGGGTTGAACTACAAAA
ACATCGACTCAAACCGTCTCACTTTTTGGTGAGTCAAAAATTTTGCAATT
TTGCAATTCGGCTTGACCCATTACGGATTGATGAGTTGATGGGTTAGTTC
ACTTACGTGTGTGT

Coding sequence (CDS) from alignment at Vu01:1826894..1831007-

>drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2 ID=drVigUngu.IT97K.1.2.Vigun01g016700.5.v1.2; Name=Vigun01g016700.5; organism=Vigna unguiculata; type=CDS; length=564bp; location=Sequence derived from: Vu01:1826894..1831007- (Vigna unguiculata
ATGTTGAAACAAGCAATTGGCAGAACTTGCAGAACCAGTGCTCATGCTTT
TGAAGGAAACAGAGTTTTGCCTTGGATATATGTGCCTTCGTGCTTTTTCC
ACAATGGACAGGCACATATGGCACCTAGAAGCTTTTTTGGGGTAGAGGAT
TTCCTCGATGATGACAATAGTCGACCTTACACATACCAAAAAGGGAAGAA
ATCAAAGAATCCAAACAAGCACATATCTTTCAAACAAAGAACGATTGCGT
ACATGGAGCCGTTTACACTTGATGTGTTTATCTCAAAACGCTTTGTATCA
GCTTCACTCACTCATAGGGTGACAAGCAAACAGGTTGCAGTTGCTGGTAC
CAACTCCAAGGACATAAAAGCTGTTCTTAGGTCTCGGTCAGACATACCAG
CATGCATATCCATCGGCAAGATTTTATCTGAAAGAGCAAGAGAAGCTGAT
GTTTACACTGCTTCCTACACTCCAAGGGAAAGGGACAAGTTTGAAGGGAA
AATCAGAGCTGTAGTTCAATCACTCATTGATAATGGGATTGATATCAAGG
TTTACCTTGATTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR005484	Ribosomal_uL18

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Search form

Vigun01g016700.5