Vigun02g186500.1

Transcript Overview
NameVigun02g186500.1
Unique NamedrVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length312
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu02chromosomeVu02:32565264..32566265 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.2n/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun02g186500drVigUngu.IT97K.1.2.Vigun02g186500.v1.2Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2Vigna unguiculatapolypeptide
drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2-proteinVigna unguiculatapolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2.exon.2drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2.exon.2Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2.exon.1drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2.exon.1Vigna unguiculataexon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2.three_prime_UTR.1drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2.three_prime_UTR.1Vigna unguiculatathree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2.CDS.1drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2.CDS.1Vigna unguiculataCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2.five_prime_UTR.2drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2.five_prime_UTR.2Vigna unguiculatafive_prime_UTR
drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2.five_prime_UTR.1drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2.five_prime_UTR.1Vigna unguiculatafive_prime_UTR


Homology
[Close]
BLAST of Vigun02g186500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6LV00|A0A4D6LV00_VIGUN (Complex 1 LYR protein domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG4g2732 PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 7.581e-67
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 
Query:    1 MGSSNVKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTDSNAHSSIKG 103
            MGSSNVKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTDSNAHSSIKG
Sbjct:    1 MGSSNVKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTDSNAHSSIKG 103
[Close]
BLAST of Vigun02g186500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VQ70|A0A1S3VQ70_VIGRR (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Vigna radiata var. radiata OX=3916 GN=LOC106777364 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 6.106e-62
Identity = 97/103 (94.17%), Postives = 99/103 (96.12%), Query Frame = 0 
Query:    1 MGSSNVKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTDSNAHSSIKG 103
            MGSS V+R SGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNA+SVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTDSN HSS KG
Sbjct:    1 MGSSKVQRLSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAQSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTDSNGHSSNKG 103
[Close]
BLAST of Vigun02g186500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0JIX9|A0A8T0JIX9_PHAAN (Complex 1 LYR protein domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0162860 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 9.166e-62
Identity = 97/103 (94.17%), Postives = 98/103 (95.15%), Query Frame = 0 
Query:    1 MGSSNVKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTDSNAHSSIKG 103
            MGSS V+R SGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTDSN HSS K 
Sbjct:    1 MGSSKVQRLSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTDSNGHSSNKA 103
[Close]
BLAST of Vigun02g186500.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7CI98|V7CI98_PHAVU (Complex 1 LYR protein domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G036400g PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 2.584e-54
Identity = 85/94 (90.43%), Postives = 91/94 (96.81%), Query Frame = 0 
Query:    1 MGSSNVKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTD 94
            MGSS V+R SGMQKQVLSLFRGFLRAARSKSEEERRKIE+IVSQEFR+NAK+VDRKNFLYIEYLLRRGNKQL+QLR+PG TGLSSLQLHFSKTD
Sbjct:    1 MGSSKVQRLSGMQKQVLSLFRGFLRAARSKSEEERRKIEAIVSQEFRQNAKNVDRKNFLYIEYLLRRGNKQLDQLRDPGTTGLSSLQLHFSKTD 94
[Close]
BLAST of Vigun02g186500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151SCY4|A0A151SCY4_CAJCA (Complex 1 LYR protein domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_025412 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.871e-51
Identity = 81/94 (86.17%), Postives = 87/94 (92.55%), Query Frame = 0 
Query:    1 MGSSNVKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTD 94
            MGSS  +R SGMQKQVLSL+RGFLRAARSKS+EERR IES+VSQEFRRNAK VDRKNFLYIEYLLRRGNKQL+QLRNPG T +SSLQLHFSKTD
Sbjct:    1 MGSSRGQRLSGMQKQVLSLYRGFLRAARSKSQEERRNIESVVSQEFRRNAKDVDRKNFLYIEYLLRRGNKQLDQLRNPGTTAISSLQLHFSKTD 94
[Close]
BLAST of Vigun02g186500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LXT4|A0A8B8LXT4_ABRPR (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Abrus precatorius OX=3816 GN=LOC113868789 PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 9.875e-51
Identity = 82/94 (87.23%), Postives = 86/94 (91.49%), Query Frame = 0 
Query:    1 MGSSNVKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTD 94
            MGS   +R SGMQKQVLSL+RGFLRAARSKSEEERRKIES VSQEFRRN+K VDRKNFLYIEYLLRRGNKQL+QLRNPG TGLSSLQLH SKTD
Sbjct:    1 MGSYKGQRLSGMQKQVLSLYRGFLRAARSKSEEERRKIESTVSQEFRRNSKEVDRKNFLYIEYLLRRGNKQLDQLRNPGTTGLSSLQLHSSKTD 94
[Close]
BLAST of Vigun02g186500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445HVT0|A0A445HVT0_GLYSO (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Glycine soja OX=3848 GN=D0Y65_028664 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.736e-50
Identity = 83/103 (80.58%), Postives = 90/103 (87.38%), Query Frame = 0 
Query:    1 MGSSNVKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTDSNAHSSIKG 103
            MGSS V+R SGMQKQVLSL+RGFLRAARSKSEEER KIESI+SQEFRRNA+ VDRKNFLYIEYLLRRGNKQL+QL+NPG TGLSSLQLH+S      H S KG
Sbjct:    1 MGSSKVQRLSGMQKQVLSLYRGFLRAARSKSEEERCKIESIISQEFRRNAEDVDRKNFLYIEYLLRRGNKQLDQLKNPGTTGLSSLQLHYS------HPSSKG 97
[Close]
BLAST of Vigun02g186500.1 vs. ExPASy TrEMBL (2024)
Match: tr|C6TB15|C6TB15_SOYBN (Complex 1 LYR protein domain-containing protein OS=Glycine max OX=3847 GN=100791084 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.736e-50
Identity = 83/103 (80.58%), Postives = 90/103 (87.38%), Query Frame = 0 
Query:    1 MGSSNVKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTDSNAHSSIKG 103
            MGSS V+R SGMQKQVLSL+RGFLRAARSKSEEER KIESI+SQEFRRNA+ VDRKNFLYIEYLLRRGNKQL+QL+NPG TGLSSLQLH+S      H S KG
Sbjct:    1 MGSSKVQRLSGMQKQVLSLYRGFLRAARSKSEEERCKIESIISQEFRRNAEDVDRKNFLYIEYLLRRGNKQLDQLKNPGTTGLSSLQLHYS------HPSSKG 97
[Close]
BLAST of Vigun02g186500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86RVT9|A0AA86RVT9_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS4016 PE=4 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 5.271e-50
Identity = 89/100 (89.00%), Postives = 93/100 (93.00%), Query Frame = 0 
Query:    1 MGSSNVKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTDSNAHSS 100
            MGSS V+R SGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAK VDRKNFLYIEYLLRRGNKQL+QLRNPG TGLSSLQLHFSKT+ +  SS
Sbjct: 1490 MGSSKVQRLSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKDVDRKNFLYIEYLLRRGNKQLDQLRNPGTTGLSSLQLHFSKTNYSETSS 1589
[Close]
BLAST of Vigun02g186500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371GM31|A0A371GM31_MUCPR (Complex 1 LYR protein domain-containing protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_26384 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 8.306e-50
Identity = 79/100 (79.00%), Postives = 89/100 (89.00%), Query Frame = 0 
Query:    1 MGSSNVKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTDSNAHSS 100
            MGSS  +R SGMQKQVLSL+RGFLRAAR+KS+EERRKIESIVS+EFRRN+K VDRKN+LYIEYLLRRGNKQL+QLRNPG TGLSS QLHF KT  +  S+
Sbjct:   16 MGSSRGQRLSGMQKQVLSLYRGFLRAARTKSDEERRKIESIVSEEFRRNSKDVDRKNYLYIEYLLRRGNKQLDQLRNPGTTGLSSFQLHFPKTSYSDPST 115
[Close]
BLAST of Vigun02g186500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9US02|SDHF1_SCHPO (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC664.12c PE=3 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 2.102e-12
Identity = 30/82 (36.59%), Postives = 50/82 (60.98%), Query Frame = 0 
Query:   10 SGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFS 91
            SG+Q+QV+  +R  L AA++K +    +  + V QEFR+N +++ +++F YIE+LLR G +Q E    P +       +HFS
Sbjct:    4 SGLQRQVIHFYRRCLHAAKAKEQPYNERWMAFVHQEFRKN-QTISKRDFFYIEHLLRVGQRQYEAYSRPEVKD-----IHFS 79
[Close]
BLAST of Vigun02g186500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q3E785|SDHF1_YEAST (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SDH6 PE=1 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 3.580e-12
Identity = 29/77 (37.66%), Postives = 50/77 (64.94%), Query Frame = 0 
Query:    7 KRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGL 83
            KR SG+QK+VL L+R  +R A +K +E +    + + +EF +  +++ RK+F  IE+LLR GNK++    +P +T +
Sbjct:    3 KRLSGLQKEVLHLYRASIRTAHTKPKENQVNFVNYIHEEFGK-YRNLPRKDFTTIEHLLRVGNKKIATFSHPELTNI 78
[Close]
BLAST of Vigun02g186500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|A6ZYX9|SDHF1_YEAS7 (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=SCY_1267 PE=3 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 3.580e-12
Identity = 29/77 (37.66%), Postives = 50/77 (64.94%), Query Frame = 0 
Query:    7 KRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGL 83
            KR SG+QK+VL L+R  +R A +K +E +    + + +EF +  +++ RK+F  IE+LLR GNK++    +P +T +
Sbjct:    3 KRLSGLQKEVLHLYRASIRTAHTKPKENQVNFVNYIHEEFGK-YRNLPRKDFTTIEHLLRVGNKKIATFSHPELTNI 78
[Close]
BLAST of Vigun02g186500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|B0K036|SDHF1_RAT (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdhaf1 PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 2.425e-11
Identity = 38/98 (38.78%), Postives = 54/98 (55.10%), Query Frame = 0 
Query:    6 VKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTDSNAHSSIKG 103
            + R S +Q+QVLSL+R  LRA R K   E R     V  EFR++A S+ R + L IEYL RRG +QL+ LR+   T + +       T+    ++  G
Sbjct:    1 MSRLSRLQRQVLSLYRELLRAGRGKPGAEAR-----VRAEFRQHA-SLPRSDVLRIEYLYRRGRRQLQLLRSGHATAMGTFVRPRGPTEEPVDATAPG 92
[Close]
BLAST of Vigun02g186500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q54HG5|SDHFA_DICDI (Succinate dehydrogenase assembly factor 1A, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=sdhaf1A PE=3 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 6.184e-11
Identity = 29/78 (37.18%), Postives = 48/78 (61.54%), Query Frame = 0 
Query:    8 RFSGMQKQVLSLFRGFLRAARSKS-EEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLS 84
            R SG+QK VLSL+R FLR +  K  +     I + +  +FR  A ++ +++   IE LL +G +QLEQ+++P  +G +
Sbjct:    7 RHSGLQKAVLSLYRSFLRVSNKKEMDNPSSSISNYIKTQFRLKATTIQKRDINKIESLLVKGKRQLEQIQDPEFSGFA 84
[Close]
BLAST of Vigun02g186500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|A8PU71|SDHF1_BOVIN (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Bos taurus OX=9913 GN=SDHAF1 PE=3 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 2.293e-10
Identity = 35/80 (43.75%), Postives = 48/80 (60.00%), Query Frame = 0 
Query:    6 VKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSS 85
            + R S +Q+QVLSL+R  LRA R K   E R     V  EFR++A  + R + L IEYL RRG +QL+ LR+   T + +
Sbjct:    1 MSRHSRLQRQVLSLYRELLRAGRGKPGAEAR-----VRAEFRQHA-CLPRSDVLRIEYLYRRGRRQLQMLRSGHATAMGA 74
[Close]
BLAST of Vigun02g186500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|A6NFY7|SDHF1_HUMAN (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Homo sapiens OX=9606 GN=SDHAF1 PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 2.844e-10
Identity = 35/81 (43.21%), Postives = 48/81 (59.26%), Query Frame = 0 
Query:    6 VKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSL 86
            + R S +Q+QVLSL+R  LRA R K   E R     V  EFR++A  + R + L IEYL RRG +QL+ LR+   T + + 
Sbjct:    1 MSRHSRLQRQVLSLYRDLLRAGRGKPGAEAR-----VRAEFRQHA-GLPRSDVLRIEYLYRRGRRQLQLLRSGHATAMGAF 75
[Close]
BLAST of Vigun02g186500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q3U276|SDHF1_MOUSE (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Sdhaf1 PE=1 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 1.499e-9
Identity = 36/98 (36.73%), Postives = 52/98 (53.06%), Query Frame = 0 
Query:    6 VKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTDSNAHSSIKG 103
            + R S +Q+QVLSL+R  LRA R     E R     V  EFR++A S+ R + L IEYL RRG +QL+ LR+   T + +        +    ++  G
Sbjct:    1 MSRPSRLQRQVLSLYRELLRAGRGTPGAEAR-----VRAEFRQHA-SLPRTDVLRIEYLYRRGRRQLQLLRSGHATAMGTFVRPRGPAEEPGDATAPG 92
[Close]
BLAST of Vigun02g186500.1 vs. Araport11
Match: | (Symbols: SDHAF1 | | chr2:16570070-16570342 FORWARD LENGTH=90)

HSP 1 Score: 121.709 bits (304), Expect = 2.572e-37
Identity = 61/93 (65.59%), Postives = 75/93 (80.65%), Query Frame = 0 
Query:    1 MGSSNVKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKT 93
            MG+S   + SGMQKQVLSL+RGFLRAARS+  E+R++IE IVS EFR N+K VDRKNF YIEYLLR G KQL+QL++P I  LSS+++  SKT
Sbjct:    1 MGAS---KLSGMQKQVLSLYRGFLRAARSRPIEDRKRIEMIVSTEFRHNSKEVDRKNFQYIEYLLRLGTKQLDQLKSPAIVSLSSIKVVTSKT 90
[Close]
BLAST of Vigun02g186500.1 vs. Araport11
Match: | (Symbols: SDHAF1 | | chr2:16570070-16570342 FORWARD LENGTH=90)

HSP 1 Score: 121.709 bits (304), Expect = 2.572e-37
Identity = 61/93 (65.59%), Postives = 75/93 (80.65%), Query Frame = 0 
Query:    1 MGSSNVKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNAKSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKT 93
            MG+S   + SGMQKQVLSL+RGFLRAARS+  E+R++IE IVS EFR N+K VDRKNF YIEYLLR G KQL+QL++P I  LSS+++  SKT
Sbjct:    1 MGAS---KLSGMQKQVLSLYRGFLRAARSRPIEDRKRIEMIVSTEFRHNSKEVDRKNFQYIEYLLRLGTKQLDQLKSPAIVSLSSIKVVTSKT 90
The following BLAST results are available for this feature:
BLAST of Vigun02g186500.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A4D6LV00|A0A4D6LV00_VIGUN7.581e-67100.00Complex 1 LYR protein domain-containing protein OS... [more]
tr|A0A1S3VQ70|A0A1S3VQ70_VIGRR6.106e-6294.17Succinate dehydrogenase assembly factor 1, mitocho... [more]
tr|A0A8T0JIX9|A0A8T0JIX9_PHAAN9.166e-6294.17Complex 1 LYR protein domain-containing protein OS... [more]
tr|V7CI98|V7CI98_PHAVU2.584e-5490.43Complex 1 LYR protein domain-containing protein OS... [more]
tr|A0A151SCY4|A0A151SCY4_CAJCA1.871e-5186.17Complex 1 LYR protein domain-containing protein OS... [more]
tr|A0A8B8LXT4|A0A8B8LXT4_ABRPR9.875e-5187.23Succinate dehydrogenase assembly factor 1, mitocho... [more]
tr|A0A445HVT0|A0A445HVT0_GLYSO1.736e-5080.58Succinate dehydrogenase assembly factor 1, mitocho... [more]
tr|C6TB15|C6TB15_SOYBN1.736e-5080.58Complex 1 LYR protein domain-containing protein OS... [more]
tr|A0AA86RVT9|A0AA86RVT9_9FABA5.271e-5089.00Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A371GM31|A0A371GM31_MUCPR8.306e-5079.00Complex 1 LYR protein domain-containing protein (F... [more]
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BLAST of Vigun02g186500.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt Swissprot)
Total hits: 8
Match NameE-valueIdentityDescription
sp|Q9US02|SDHF1_SCHPO2.102e-1236.59Succinate dehydrogenase assembly factor 1, mitocho... [more]
sp|Q3E785|SDHF1_YEAST3.580e-1237.66Succinate dehydrogenase assembly factor 1, mitocho... [more]
sp|A6ZYX9|SDHF1_YEAS73.580e-1237.66Succinate dehydrogenase assembly factor 1, mitocho... [more]
sp|B0K036|SDHF1_RAT2.425e-1138.78Succinate dehydrogenase assembly factor 1, mitocho... [more]
sp|Q54HG5|SDHFA_DICDI6.184e-1137.18Succinate dehydrogenase assembly factor 1A, mitoch... [more]
sp|A8PU71|SDHF1_BOVIN2.293e-1043.75Succinate dehydrogenase assembly factor 1, mitocho... [more]
sp|A6NFY7|SDHF1_HUMAN2.844e-1043.21Succinate dehydrogenase assembly factor 1, mitocho... [more]
sp|Q3U276|SDHF1_MOUSE1.499e-936.73Succinate dehydrogenase assembly factor 1, mitocho... [more]
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BLAST of Vigun02g186500.1 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
|2.572e-3765.59Symbols: SDHAF1 | | chr2:16570070-16570342 FORWAR... [more]
|2.572e-3765.59Symbols: SDHAF1 | | chr2:16570070-16570342 FORWAR... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna unguiculata L. Walp IT97K-499-35 genome v1.2
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR protein domainPFAMPF05347Complex1_LYRcoord: 14..74
e-value: 5.7E-9
score: 47.1
NoneNo IPR availablePANTHERPTHR13675LYR MOTIF-CONTAINING PROTEIN 2coord: 9..85
IPR045295SDHAF1, LYR domainCDDcd20268Complex1_LYR_SDHAF1_LYRM8coord: 10..74
e-value: 1.11635E-24
score: 86.4962

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2; Name=Vigun02g186500.1; organism=Vigna unguiculata; type=mRNA; length=312bp
ATGGGAAGCTCCAACGTGAAAAGGTTTTCTGGGATGCAGAAACAAGTACT
CAGTCTTTTCAGAGGGTTTCTGCGTGCAGCACGTTCCAAATCGGAGGAAG
AGCGACGCAAAATAGAGTCAATTGTATCGCAAGAGTTTCGGCGTAATGCA
AAGAGTGTAGATCGGAAAAATTTTCTCTACATTGAGTACTTGCTTCGTCG
TGGCAACAAACAGCTTGAACAACTAAGGAACCCTGGTATCACTGGCTTAT
CTTCATTGCAACTTCATTTCTCCAAAACTGATTCCAATGCCCATTCAAGT
ATTAAGGGTTGA
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protein sequence of drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2

>drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2; Name=drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2; organism=Vigna unguiculata; type=polypeptide; length=104bp
MGSSNVKRFSGMQKQVLSLFRGFLRAARSKSEEERRKIESIVSQEFRRNA
KSVDRKNFLYIEYLLRRGNKQLEQLRNPGITGLSSLQLHFSKTDSNAHSS
IKG*
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mRNA from alignment at Vu02:32565264..32566265-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2; Name=Vigun02g186500.1; organism=Vigna unguiculata; type=mRNA; length=1002bp; location=Sequence derived from: Vu02:32565264..32566265- (Vigna unguiculata
GTAGTAGGCTTTTATAGTTTCAGTTGGACCCTAATAATCCAAATGGATTC
TGAACTTGGAATAATAGTTAGCTCAGACCTACCTTAGCAAACTTCCTCTT
TCCAAGACAGAACATCGACAACAGATGGGTTTGATTGCACCGCTTAAATT
TCGATCTGAACAAATTTGTTTCGGATAATTGTTTTGTCCTGTTCGAGTTT
GAGGTAATTCGTTTCGGATATTTGCTTACGAACTATTTGATAAAATGCCT
AACATGGATTTGAATCCTTAGTAGGGTTTTTAGGTGGCTGATTCTGATAT
TCCAAAGGATTGAGATTTTTATATTGCTTATTGTTTTCACAACGTTCCAA
TCTGATGCAATAAAGTGTGAACGAACGAACTCACCAGCATCGTTGTTCTT
TATGTGCAGAATCTGTGCCCCGAAAACTTGTATAGATTTGGAGAAAACAA
GATGCGATGGGAAGCTCCAACGTGAAAAGGTTTTCTGGGATGCAGAAACA
AGTACTCAGTCTTTTCAGAGGGTTTCTGCGTGCAGCACGTTCCAAATCGG
AGGAAGAGCGACGCAAAATAGAGTCAATTGTATCGCAAGAGTTTCGGCGT
AATGCAAAGAGTGTAGATCGGAAAAATTTTCTCTACATTGAGTACTTGCT
TCGTCGTGGCAACAAACAGCTTGAACAACTAAGGAACCCTGGTATCACTG
GCTTATCTTCATTGCAACTTCATTTCTCCAAAACTGATTCCAATGCCCAT
TCAAGTATTAAGGGTTGAAAATGTTTGTATTTTTACCATTAGATTTAGGG
TTCTATAATTGCCTACAAGAAACCCAACGAATTCATTTATGTTTGGGTCA
TGTTTCTCGTCTATGACTATGATTCATTAACAAATGCTTGCTGGTTAAGC
CTGCCAAACTGTTCAAATCATGAACATTCAATAAATTCAAAATTTCAATC
AAATCATGCAAAGCATCTTTATTTTAATAATGCGTTAGAAAATGCACTGT
TG
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Coding sequence (CDS) from alignment at Vu02:32565264..32566265-

>drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun02g186500.1.v1.2; Name=Vigun02g186500.1; organism=Vigna unguiculata; type=CDS; length=312bp; location=Sequence derived from: Vu02:32565264..32566265- (Vigna unguiculata
ATGGGAAGCTCCAACGTGAAAAGGTTTTCTGGGATGCAGAAACAAGTACT
CAGTCTTTTCAGAGGGTTTCTGCGTGCAGCACGTTCCAAATCGGAGGAAG
AGCGACGCAAAATAGAGTCAATTGTATCGCAAGAGTTTCGGCGTAATGCA
AAGAGTGTAGATCGGAAAAATTTTCTCTACATTGAGTACTTGCTTCGTCG
TGGCAACAAACAGCTTGAACAACTAAGGAACCCTGGTATCACTGGCTTAT
CTTCATTGCAACTTCATTTCTCCAAAACTGATTCCAATGCCCATTCAAGT
ATTAAGGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR_dom
IPR045295Complex1_LYR_SDHAF1_LYRM8
Vocabulary: Biological Process
TermDefinition
GO:0034553mitochondrial respiratory chain complex II assembly