Vigun07g022500.1

Transcript Overview
NameVigun07g022500.1
Unique NamedrVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length630
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu07chromosomeVu07:1910296..1913443 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.2n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjvunL260Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvunL0560Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvunL342Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvunL0657Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvunL0874Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvunL1160Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carvunL249Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavunL195Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavunL258Cajanus cajan cv. Asha genome v2.0Cajanus cajan
psvunL588Pisum sativum Cameor genome v1aPisum sativum
vunvunL023Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunL033Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vuvunL020Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvunL239Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvunL364Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvunL552Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vssvunL491Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvunL578Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vrvvunL583Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vuvunL423Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vssvunL738Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvunL746Vicia sativa cv. Studenica genome v1.0Vicia sativa

Orthologs
Gene/TranscriptAssemblySpecies
Psat6g090800.1Pisum sativum Cameor genome v1aPisum sativum
rna-XM_014659352.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Phvul.007G262600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-TanjilR_01921Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Va02G004980.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg675.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.Ca_v2.0_10531Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun07g022500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun07g022500drVigUngu.IT97K.1.2.Vigun07g022500.v1.2Vigna unguiculatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.exon.1drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.exon.1Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.exon.2drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.exon.2Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.exon.3drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.exon.3Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.exon.4drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.exon.4Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.exon.5drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.exon.5Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.exon.6drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.exon.6Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.exon.7drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.exon.7Vigna unguiculataexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.five_prime_UTR.1drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.five_prime_UTR.1Vigna unguiculatafive_prime_UTR
drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.five_prime_UTR.2drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.five_prime_UTR.2Vigna unguiculatafive_prime_UTR
drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.five_prime_UTR.3drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.five_prime_UTR.3Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.CDS.1drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.CDS.1Vigna unguiculataCDS
drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.CDS.2drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.CDS.2Vigna unguiculataCDS
drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.CDS.3drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.CDS.3Vigna unguiculataCDS
drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.CDS.4drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.CDS.4Vigna unguiculataCDS
drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.CDS.5drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.CDS.5Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.three_prime_UTR.1drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2.three_prime_UTR.1Vigna unguiculatathree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2Vigna unguiculatapolypeptide
drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2-proteinVigna unguiculatapolypeptide


Homology
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0FDC8|A0A3Q0FDC8_VIGRR (Serine/arginine-rich SC35-like splicing factor SCL33 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106772769 PE=4 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 2.595e-127
Identity = 197/208 (94.71%), Postives = 199/208 (95.67%), Query Frame = 0 
Query:    1 MRGRSYSYSPSPPRHYSRRRRSPSPRGRHRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRSPRTYSPSPDYSPSPRRRRNYRSISPRGRKYSDRSYSRSPYGSRSRSRSRSYGRSRSYSRSLSRSPGYS 208
            MRGRSYSYSPSPPRHYSRRRRSPSPRGR+RGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRSPRTYSPSPDYS SPRRRR+YRSISPR RKYSDRSYSRSPYGSRSRS      RSRSYSRSLS SPGYS
Sbjct:    1 MRGRSYSYSPSPPRHYSRRRRSPSPRGRYRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRSPRTYSPSPDYSSSPRRRRHYRSISPRNRKYSDRSYSRSPYGSRSRS------RSRSYSRSLSASPGYS 202
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3V9F4|A0A1S3V9F4_VIGRR (Serine/arginine-rich SC35-like splicing factor SCL33 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106772769 PE=4 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 4.684e-125
Identity = 196/208 (94.23%), Postives = 198/208 (95.19%), Query Frame = 0 
Query:    1 MRGRSYSYSPSPPRHYSRRRRSPSPRGRHRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRSPRTYSPSPDYSPSPRRRRNYRSISPRGRKYSDRSYSRSPYGSRSRSRSRSYGRSRSYSRSLSRSPGYS 208
            MRGRSYSYSPSPPRHYSRRRRSPSPRGR+RGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARE RRDRSYDYRRSPRTYSPSPDYS SPRRRR+YRSISPR RKYSDRSYSRSPYGSRSRS      RSRSYSRSLS SPGYS
Sbjct:    1 MRGRSYSYSPSPPRHYSRRRRSPSPRGRYRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARE-RRDRSYDYRRSPRTYSPSPDYSSSPRRRRHYRSISPRNRKYSDRSYSRSPYGSRSRS------RSRSYSRSLSASPGYS 201
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9TU04|A0A0L9TU04_PHAAN (Serine/arginine-rich SC35-like splicing factor OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0187820 PE=4 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 1.743e-93
Identity = 174/181 (96.13%), Postives = 177/181 (97.79%), Query Frame = 0 
Query:    1 MRGRSYSYSPSPPRHYSRRRRSPSPRGRHRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRSPRTYSPSPDYSPSPRRRRNYRSISPRGRKYSDRSYSRSPYG 181
            MRGRSYSYSPSPPRHYSRR+RSPSPRGR+RG DRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFA ENRKKPSEMRARERRRDRSYDYRRSPRTYSPSPDYS SPRRRR+YRSISPR RKYSDRSYSRSPYG
Sbjct:    1 MRGRSYSYSPSPPRHYSRRKRSPSPRGRYRGHDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAGENRKKPSEMRARERRRDRSYDYRRSPRTYSPSPDYSSSPRRRRHYRSISPRVRKYSDRSYSRSPYG 181
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P4CGL8|A0A6P4CGL8_ARADU (Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arachis duranensis OX=130453 GN=LOC107475992 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.272e-92
Identity = 153/184 (83.15%), Postives = 160/184 (86.96%), Query Frame = 0 
Query:    1 MRGRSYSYSPSPPRHYSRRRRSPSPRGRHRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYR------RSP---RTYSPSPDYSPSPRRRRNYRSISPRGRKYSDRSY 175
            MRGRSYSYSPSPPR YS RRRSPSPRG +RGR RDLPTSLLVRNLH+DCR EDL GPFGQFGP+KDVYLPRDYYTG+PRGFGFVQYVDPADAADAK+HMDGQILLGRELTVVFAEENRKKP EMRARERR  RSYDYR      RSP   RTYS SP YSPSP RRRN RSISPR ++Y DRSY
Sbjct:    1 MRGRSYSYSPSPPRRYSHRRRSPSPRGHYRGRGRDLPTSLLVRNLHKDCRPEDLRGPFGQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARERR--RSYDYRSPRRYSRSPRYARTYSRSPGYSPSPVRRRNSRSISPRYKRYRDRSY 182
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SUP1|A0A0S3SUP1_PHAAN (RRM domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G343000 PE=4 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 6.735e-91
Identity = 173/182 (95.05%), Postives = 176/182 (96.70%), Query Frame = 0 
Query:    1 MRGRSYSYSPSPPRHYSRRRRSPSPRGRHRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRSPRTYSPSPDYSPSPRRRRNYR-SISPRGRKYSDRSYSRSPYG 181
            MRGRSYSYSPSPPRHYSRR+RSPSPRGR+RG DRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFA ENRKKPSEMRARERRRDRSYDYRRSPRTYSPSPDYS SPRRRR+YR SISPR RKY DRSYSRSPYG
Sbjct:    1 MRGRSYSYSPSPPRHYSRRKRSPSPRGRYRGHDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAGENRKKPSEMRARERRRDRSYDYRRSPRTYSPSPDYSSSPRRRRHYRLSISPRVRKYRDRSYSRSPYG 182
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy TrEMBL (2024)
Match: tr|I3SR49|I3SR49_LOTJA (RRM domain-containing protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 3.933e-89
Identity = 153/194 (78.87%), Postives = 165/194 (85.05%), Query Frame = 0 
Query:    1 MRGRSYSYSPSPPRHYSRRRR-SPSPRGRHRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERR--RDRSYDYRRSP----------RTYSPSPDYSPSPRRRRNYRSISPRGRKYSDRSYSRSPYG 181
            MRGRSYSYSPSPPR Y  RRR SPSP+GR+RGR+RDLPTSLLVRNLHRD R EDLHGPF  FGP+KDVYLPRDYYTG+PRGFGFVQYVDPADAADAK+H+DGQILLGRELTVVFAEENRKKP+EMRARER   R+RSYDYRRSP          RTYS SPDY+PSPRR R  +SISPR R+Y  RSYS SPYG
Sbjct:    1 MRGRSYSYSPSPPRRYGGRRRRSPSPKGRYRGRERDLPTSLLVRNLHRDTRTEDLHGPFSHFGPIKDVYLPRDYYTGNPRGFGFVQYVDPADAADAKYHLDGQILLGRELTVVFAEENRKKPAEMRARERHSTRERSYDYRRSPRGYSRSPRYARTYSRSPDYTPSPRRWRYSKSISPRDRRYGRRSYSGSPYG 194
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2I4E0B0|A0A2I4E0B0_JUGRE (Serine/arginine-rich SC35-like splicing factor SCL33 isoform X1 OS=Juglans regia OX=51240 GN=LOC108985117 PE=4 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 6.189e-85
Identity = 141/186 (75.81%), Postives = 157/186 (84.41%), Query Frame = 0 
Query:    1 MRGRSYSYSPSPPRHYSRRRRSPSPRGRHRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRSP----------RTYSPSPD-YSPSPRRRRNYRSISPRGRKYSDRSY 175
            MRGRSYSYSPSPPR YSRRRRSPSP+GR+ G  RDLPTSLLVRNL  DCR+EDL GPFGQFGP+KD+YLPRDY+TG+PRGFGFVQ+VDPADAADAK+HMDGQILLGRELTVVFAEENRK+P+EMRARER R +SY+  RSP          RTYS SPD YSPSPRRR   RSISPR  +Y ++SY
Sbjct:    1 MRGRSYSYSPSPPRGYSRRRRSPSPKGRYGGHGRDLPTSLLVRNLRHDCRSEDLRGPFGQFGPLKDIYLPRDYHTGEPRGFGFVQFVDPADAADAKYHMDGQILLGRELTVVFAEENRKRPAEMRARERYRGQSYERGRSPLRYSRSPRYARTYSRSPDYYSPSPRRRHYSRSISPRHGRYREKSY 186
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6M2EFK6|A0A6M2EFK6_9ROSI (RRM domain-containing protein OS=Populus davidiana OX=266767 PE=4 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.413e-84
Identity = 147/195 (75.38%), Postives = 160/195 (82.05%), Query Frame = 0 
Query:    1 MRGRSYSYSPSPPRHYSRRRRSPSPRGRHRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRR-DRSYDYRRSP-----RTYSPSPD-YSPSPRRRRNYRSISPRGRKYSDRSYSRSPYGSRSRSRS 188
            MRGRSY YSPSPPR Y RR R+PSPRGR+  R RDLPTSLLVRNL  DCR EDL G FG+FGP+KD+YLPRDYYTG+PRGFGFVQY++PADAADAKHHMDG+ILLGRELTVVFAEENRKKP+EMR R+R R  R YD RRSP     R+YS SP  YSPSPRRR   RSISPR R Y  R YSRSP+GSRS SRS
Sbjct:    1 MRGRSYDYSPSPPRGYGRRHRNPSPRGRYGSRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYTGEPRGFGFVQYLEPADAADAKHHMDGEILLGRELTVVFAEENRKKPAEMRQRDRVRGGRYYDQRRSPSPCYGRSYSRSPVYYSPSPRRRHYSRSISPRDRSYRLRPYSRSPHGSRSYSRS 195
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5N5JNS8|A0A5N5JNS8_9ROSI (RRM domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_023883 PE=4 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 5.508e-83
Identity = 152/202 (75.25%), Postives = 167/202 (82.67%), Query Frame = 0 
Query:    1 MRGRSYSYSPSPPRHYSRRRRSPSPRGRHRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSY-DYRRSP-----RTYSPSPDYSPSPRRRRNYRSISPRGRKYSDRSYSRSPYGSRSRSRSRSYGRSRS 196
            MRGRSYSYSPSPPR Y RR RSPSPRGRH GR RDLPTSLLVRNL  DCR EDL  PFG+FGP+KDVYLPRDYYTG+PRGFGFVQY++PADAADAKHHMDG+IL GRELTVVFAEENRKKP+EMRAR+R     Y D RRSP     R+YS SP YSPSPRRR   RS+SPR R+Y D+++SRSPYGSRS SRS    RSR+
Sbjct:    1 MRGRSYSYSPSPPRGYGRRHRSPSPRGRHGGRGRDLPTSLLVRNLRLDCRPEDLRRPFGRFGPLKDVYLPRDYYTGEPRGFGFVQYLEPADAADAKHHMDGEILFGRELTVVFAEENRKKPAEMRARDRVSGGRYSDRRRSPSPSYGRSYSRSPVYSPSPRRRHYSRSVSPRDRRYRDQTHSRSPYGSRSYSRSPVRNRSRA 202
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4U5MPD7|A0A4U5MPD7_POPAL (RRM domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000299880 PE=4 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 1.700e-82
Identity = 145/195 (74.36%), Postives = 160/195 (82.05%), Query Frame = 0 
Query:    1 MRGRSYSYSPSPPRHYSRRRRSPSPRGRHRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRR-DRSYDYRRSP-----RTYSPSPD-YSPSPRRRRNYRSISPRGRKYSDRSYSRSPYGSRSRSRS 188
            MRGRSY YSPSPPR Y RR R+PSPRGR+  R RDLPTSLLVRNL  DCR EDL G FG+FGP+KD+YLPRDYYTG+PRGFGFVQY++ ADAADAKHHMDG+ILLGRELTVVFAEENRKKP+EMR R+R R  + YD RRSP     R+YS SP  YSPSPRRR   RSISPR R+Y  R YSRSP+GSRS SRS
Sbjct:    1 MRGRSYDYSPSPPRGYGRRHRNPSPRGRYGSRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYTGEPRGFGFVQYLESADAADAKHHMDGEILLGRELTVVFAEENRKKPAEMRQRDRVRGGQYYDQRRSPSPHYGRSYSRSPVYYSPSPRRRHYSRSISPRDRRYRLRPYSRSPHGSRSCSRS 195
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LHP2|SL30A_ARATH (Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana OX=3702 GN=SCL30A PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 7.712e-72
Identity = 140/221 (63.35%), Postives = 160/221 (72.40%), Query Frame = 0 
Query:    1 MRGRSYSYSPSPPRHYSRRRRSPSPRGRHRG-RDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARER--RRDRSYD-------------YRRSPRTYSPSPDYSPSPRRRRNYRSISPRGRKYS-DRSYSRSPYGSRSRSRSRSYGRSRSYSRSLSRS 204
            MRGRSY+  PSPPR Y RR RSPSPRGR  G RD DLPTSLLVRNL  DCR EDL  PF QFGPVKD+YLPRDYYTGDPRGFGF+Q++DPADAA+AKH MDG +LLGRELTVVFAEENRKKP+EMR R+R  R +R  D              RR  R+ S S  Y+  P +R   RS+SP+ R+Y  +RSYSRSP  + SR RS S GR +S+SRS  RS
Sbjct:    1 MRGRSYT--PSPPRGYGRRGRSPSPRGRFGGSRDSDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRKKPTEMRTRDRGGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYNSPPAKRHQSRSVSPQDRRYEKERSYSRSPPHNGSRVRSGSPGRVKSHSRSPRRS 219
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SEU4|SRC33_ARATH (Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana OX=3702 GN=SCL33 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 4.163e-68
Identity = 142/214 (66.36%), Postives = 155/214 (72.43%), Query Frame = 0 
Query:    1 MRGRSYSYSPSPPRHYSRRRRSPSPRGRHRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRS---------------PRTYSPSPDYSPSPRRRRNYRSISPRGRKYSD-RSYSRSPY--GSRSRSRSRSYGRSRS 196
            MRGRSY+  PSPPR Y RR RSPSPRGR+ GR RDLPTSLLVRNL  DCR EDL   F QFGPVKD+YLPRDYYTGDPRGFGFVQ++DPADAADAKHHMDG +LLGRELTVVFAEENRKKP+EMRARER   R  D RR+                R+ S S DY   P RR + RSISPR  +Y   RSYSRSP   GSR RS +   G+SRS
Sbjct:    1 MRGRSYT--PSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRRHHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRS 212
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q1PDV2|SRC28_ARATH (Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana OX=3702 GN=SCL28 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 8.593e-32
Identity = 56/104 (53.85%), Postives = 73/104 (70.19%), Query Frame = 0 
Query:   37 PTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRS 140
            P+ LL+RNL  D R  DL   F +FGP+KD+YLPR+YYTG+PRGFGFV+Y    DAA+A   M+ +++ GRE+ +VFAEENRK P EMR       R  DY+R+
Sbjct:   46 PSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGREIAIVFAEENRKTPQEMRTTNGTSGRHGDYKRT 149
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8L3X8|SRC30_ARATH (Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana OX=3702 GN=SCL30 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 3.872e-31
Identity = 54/95 (56.84%), Postives = 70/95 (73.68%), Query Frame = 0 
Query:   40 LLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRS 134
            LLVRN+  DCR E+L  PF +FGPV+DVY+PRDYY+G PRGF FV++VD  DA +A+  M+ +   GRE+TVV A E+RK+P EMR + R R R 
Sbjct:   49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITVVVASESRKRPEEMRVKTRTRSRE 143
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9R0U0|SRS10_MOUSE (Serine/arginine-rich splicing factor 10 OS=Mus musculus OX=10090 GN=Srsf10 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 4.363e-27
Identity = 46/93 (49.46%), Postives = 68/93 (73.12%), Query Frame = 0 
Query:   38 TSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERR 130
            TSL VRN+  D R+EDL   FG++GP+ DVY+P D+YT  PRGF +VQ+ D  DA DA H++D + + GR++ + FA+ +RK P++M+A+E R
Sbjct:   10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGR 102
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O75494|SRS10_HUMAN (Serine/arginine-rich splicing factor 10 OS=Homo sapiens OX=9606 GN=SRSF10 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.363e-27
Identity = 46/93 (49.46%), Postives = 68/93 (73.12%), Query Frame = 0 
Query:   38 TSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERR 130
            TSL VRN+  D R+EDL   FG++GP+ DVY+P D+YT  PRGF +VQ+ D  DA DA H++D + + GR++ + FA+ +RK P++M+A+E R
Sbjct:   10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGR 102
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8WXF0|SRS12_HUMAN (Serine/arginine-rich splicing factor 12 OS=Homo sapiens OX=9606 GN=SRSF12 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.706e-22
Identity = 70/191 (36.65%), Postives = 102/191 (53.40%), Query Frame = 0 
Query:   38 TSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRSPRTYSPSP---------------DYSPSPRRRRNYRSISPRGRKYSDRSYS----RSP---YGSRSRSRSRSY-GRSRSYSRSLSRSP 205
            TSL +RN+    R EDL   FG++GP+ DVY+P D+YT  PRGF +VQ+ D  DA DA ++++ + + GR++ + FA+ +RK P +M+++ER      D+RRS                           S  RR +Y     R +    RS S    R+P   +GSR RSRS+S   RS+S  +S S SP
Sbjct:   10 TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKERHPCSPSDHRRSRSPSQRRTRSRSSSWGRNRRRSDSLKESRHRRFSYSQSKSRSKSLPRRSTSARQSRTPRRNFGSRGRSRSKSLQKRSKSIGKSQSSSP 200
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FMG4|SC35_ARATH (Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana OX=3702 GN=SC35 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.629e-15
Identity = 41/92 (44.57%), Postives = 58/92 (63.04%), Query Frame = 0 
Query:   39 SLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAE--ENRKKPSEMRARE 128
            SLLV N+     A+DL+  F ++G V DV++PRD  TGD RGF FV+Y    +A  A   +DG+++ GRE+TV FA+   N +K S+ R  E
Sbjct:   17 SLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVE 108
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P30352|SRSF2_CHICK (Serine/arginine-rich splicing factor 2 OS=Gallus gallus OX=9031 GN=SRSF2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.214e-13
Identity = 38/77 (49.35%), Postives = 46/77 (59.74%), Query Frame = 0 
Query:   38 TSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFA 114
            TSL V NL      + L   F ++G V DVY+PRD YT + RGF FV++ D  DA DA   MDG +L GREL V  A
Sbjct:   14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
[Close]
BLAST of Vigun07g022500.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5R1W5|SRSF2_PANTR (Serine/arginine-rich splicing factor 2 OS=Pan troglodytes OX=9598 GN=SRSF2 PE=2 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 6.126e-13
Identity = 38/77 (49.35%), Postives = 46/77 (59.74%), Query Frame = 0 
Query:   38 TSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFA 114
            TSL V NL      + L   F ++G V DVY+PRD YT + RGF FV++ D  DA DA   MDG +L GREL V  A
Sbjct:   14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
[Close]
BLAST of Vigun07g022500.1 vs. Araport11
Match: | (Symbols: SCL30A, At-SCL30A | SC35-like splicing factor 30A | chr3:4429564-4431602 REVERSE LENGTH=262)

HSP 1 Score: 221.861 bits (564), Expect = 8.042e-73
Identity = 140/221 (63.35%), Postives = 160/221 (72.40%), Query Frame = 0 
Query:    1 MRGRSYSYSPSPPRHYSRRRRSPSPRGRHRG-RDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARER--RRDRSYD-------------YRRSPRTYSPSPDYSPSPRRRRNYRSISPRGRKYS-DRSYSRSPYGSRSRSRSRSYGRSRSYSRSLSRS 204
            MRGRSY+  PSPPR Y RR RSPSPRGR  G RD DLPTSLLVRNL  DCR EDL  PF QFGPVKD+YLPRDYYTGDPRGFGF+Q++DPADAA+AKH MDG +LLGRELTVVFAEENRKKP+EMR R+R  R +R  D              RR  R+ S S  Y+  P +R   RS+SP+ R+Y  +RSYSRSP  + SR RS S GR +S+SRS  RS
Sbjct:    1 MRGRSYT--PSPPRGYGRRGRSPSPRGRFGGSRDSDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRKKPTEMRTRDRGGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYNSPPAKRHQSRSVSPQDRRYEKERSYSRSPPHNGSRVRSGSPGRVKSHSRSPRRS 219
[Close]
BLAST of Vigun07g022500.1 vs. Araport11
Match: | (Symbols: SCL33, At-SCL33, ATSCL33, SR33 | SC35-LIKE SPLICING FACTOR 33, SC35-like splicing factor 33 | chr1:20630676-20632567 FORWARD LENGTH=220)

HSP 1 Score: 214.927 bits (546), Expect = 1.100e-70
Identity = 143/216 (66.20%), Postives = 156/216 (72.22%), Query Frame = 0 
Query:    1 MRGRSYSYSPSPPRHYSRRRRSPSPRGRHRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRS---------------PRTYSPSPDYSPSPRRRRNYRSISPRGRKYSD-RSYSRSPY--GSRSRSRSRSYGRSRSYS 198
            MRGRSY+  PSPPR Y RR RSPSPRGR+ GR RDLPTSLLVRNL  DCR EDL   F QFGPVKD+YLPRDYYTGDPRGFGFVQ++DPADAADAKHHMDG +LLGRELTVVFAEENRKKP+EMRARER   R  D RR+                R+ S S DY   P RR + RSISPR  +Y   RSYSRSP   GSR RS +   G+SRS S
Sbjct:    1 MRGRSYT--PSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRRHHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSLS 214
[Close]
BLAST of Vigun07g022500.1 vs. Araport11
Match: | (Symbols: SCL33, At-SCL33, ATSCL33, SR33 | SC35-LIKE SPLICING FACTOR 33, SC35-like splicing factor 33 | chr1:20630676-20632567 FORWARD LENGTH=220)

HSP 1 Score: 214.927 bits (546), Expect = 1.100e-70
Identity = 143/216 (66.20%), Postives = 156/216 (72.22%), Query Frame = 0 
Query:    1 MRGRSYSYSPSPPRHYSRRRRSPSPRGRHRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRS---------------PRTYSPSPDYSPSPRRRRNYRSISPRGRKYSD-RSYSRSPY--GSRSRSRSRSYGRSRSYS 198
            MRGRSY+  PSPPR Y RR RSPSPRGR+ GR RDLPTSLLVRNL  DCR EDL   F QFGPVKD+YLPRDYYTGDPRGFGFVQ++DPADAADAKHHMDG +LLGRELTVVFAEENRKKP+EMRARER   R  D RR+                R+ S S DY   P RR + RSISPR  +Y   RSYSRSP   GSR RS +   G+SRS S
Sbjct:    1 MRGRSYT--PSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRRHHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSLS 214
[Close]
BLAST of Vigun07g022500.1 vs. Araport11
Match: | (Symbols: SCL33, At-SCL33, ATSCL33, SR33 | SC35-LIKE SPLICING FACTOR 33, SC35-like splicing factor 33 | chr1:20630676-20632695 FORWARD LENGTH=287)

HSP 1 Score: 213.386 bits (542), Expect = 4.336e-69
Identity = 142/214 (66.36%), Postives = 155/214 (72.43%), Query Frame = 0 
Query:    1 MRGRSYSYSPSPPRHYSRRRRSPSPRGRHRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRS---------------PRTYSPSPDYSPSPRRRRNYRSISPRGRKYSD-RSYSRSPY--GSRSRSRSRSYGRSRS 196
            MRGRSY+  PSPPR Y RR RSPSPRGR+ GR RDLPTSLLVRNL  DCR EDL   F QFGPVKD+YLPRDYYTGDPRGFGFVQ++DPADAADAKHHMDG +LLGRELTVVFAEENRKKP+EMRARER   R  D RR+                R+ S S DY   P RR + RSISPR  +Y   RSYSRSP   GSR RS +   G+SRS
Sbjct:    1 MRGRSYT--PSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRRHHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRS 212
[Close]
BLAST of Vigun07g022500.1 vs. Araport11
Match: | (Symbols: SCL33, At-SCL33, ATSCL33, SR33 | SC35-LIKE SPLICING FACTOR 33, SC35-like splicing factor 33 | chr1:20630676-20632695 FORWARD LENGTH=299)

HSP 1 Score: 205.297 bits (521), Expect = 9.780e-66
Identity = 142/226 (62.83%), Postives = 155/226 (68.58%), Query Frame = 0 
Query:    1 MRGRSYSYSPSPPRHYSRRRRSPSPRGRHRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTG------------DPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRS---------------PRTYSPSPDYSPSPRRRRNYRSISPRGRKYSD-RSYSRSPY--GSRSRSRSRSYGRSRS 196
            MRGRSY+  PSPPR Y RR RSPSPRGR+ GR RDLPTSLLVRNL  DCR EDL   F QFGPVKD+YLPRDYYTG            DPRGFGFVQ++DPADAADAKHHMDG +LLGRELTVVFAEENRKKP+EMRARER   R  D RR+                R+ S S DY   P RR + RSISPR  +Y   RSYSRSP   GSR RS +   G+SRS
Sbjct:    1 MRGRSYT--PSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRRHHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRS 224
[Close]
BLAST of Vigun07g022500.1 vs. Araport11
Match: | (Symbols: SCL28, At-SCL28 | SC35-like splicing factor 28 | chr5:6269081-6271158 REVERSE LENGTH=235)

HSP 1 Score: 118.627 bits (296), Expect = 8.685e-33
Identity = 56/104 (53.85%), Postives = 73/104 (70.19%), Query Frame = 0 
Query:   37 PTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRS 140
            P+ LL+RNL  D R  DL   F +FGP+KD+YLPR+YYTG+PRGFGFV+Y    DAA+A   M+ +++ GRE+ +VFAEENRK P EMR       R  DY+R+
Sbjct:   46 PSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGREIAIVFAEENRKTPQEMRTTNGTSGRHGDYKRT 149
[Close]
BLAST of Vigun07g022500.1 vs. Araport11
Match: | (Symbols: SCL28, At-SCL28 | SC35-like splicing factor 28 | chr5:6268925-6271158 REVERSE LENGTH=236)

HSP 1 Score: 118.627 bits (296), Expect = 8.898e-33
Identity = 56/104 (53.85%), Postives = 73/104 (70.19%), Query Frame = 0 
Query:   37 PTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRS 140
            P+ LL+RNL  D R  DL   F +FGP+KD+YLPR+YYTG+PRGFGFV+Y    DAA+A   M+ +++ GRE+ +VFAEENRK P EMR       R  DY+R+
Sbjct:   46 PSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGREIAIVFAEENRKTPQEMRTTNGTSGRHGDYKRT 149
[Close]
BLAST of Vigun07g022500.1 vs. Araport11
Match: | (Symbols: SCL30, At-SCL30 | SC35-like splicing factor 30 | chr3:20561024-20563502 FORWARD LENGTH=262)

HSP 1 Score: 117.472 bits (293), Expect = 4.003e-32
Identity = 54/95 (56.84%), Postives = 70/95 (73.68%), Query Frame = 0 
Query:   40 LLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRS 134
            LLVRN+  DCR E+L  PF +FGPV+DVY+PRDYY+G PRGF FV++VD  DA +A+  M+ +   GRE+TVV A E+RK+P EMR + R R R 
Sbjct:   49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITVVVASESRKRPEEMRVKTRTRSRE 143
[Close]
BLAST of Vigun07g022500.1 vs. Araport11
Match: | (Symbols: SCL33, At-SCL33, ATSCL33, SR33 | SC35-LIKE SPLICING FACTOR 33, SC35-like splicing factor 33 | chr1:20631916-20632695 FORWARD LENGTH=204)

HSP 1 Score: 94.7449 bits (234), Expect = 5.138e-24
Identity = 72/129 (55.81%), Postives = 81/129 (62.79%), Query Frame = 0 
Query:   87 VDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRR----------------SPRTYSPSPDYSPSPRRRRNYRSISPRGRKYSD-RSYSRSPY--GSRSRSRSRSYGRSRS 196
            +DPADAADAKHHMDG +LLGRELTVVFAEENRKKP+EMRARER     +  RR                  R+ S S DY   P RR + RSISPR  +Y   RSYSRSP   GSR RS +   G+SRS
Sbjct:    1 MDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGSRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRRHHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRS 129
[Close]
BLAST of Vigun07g022500.1 vs. Araport11
Match: | (Symbols: SCL33, At-SCL33, ATSCL33, SR33 | SC35-LIKE SPLICING FACTOR 33, SC35-like splicing factor 33 | chr1:20631916-20632695 FORWARD LENGTH=204)

HSP 1 Score: 94.7449 bits (234), Expect = 5.138e-24
Identity = 72/129 (55.81%), Postives = 81/129 (62.79%), Query Frame = 0 
Query:   87 VDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRR----------------SPRTYSPSPDYSPSPRRRRNYRSISPRGRKYSD-RSYSRSPY--GSRSRSRSRSYGRSRS 196
            +DPADAADAKHHMDG +LLGRELTVVFAEENRKKP+EMRARER     +  RR                  R+ S S DY   P RR + RSISPR  +Y   RSYSRSP   GSR RS +   G+SRS
Sbjct:    1 MDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGSRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRRHHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRS 129
The following BLAST results are available for this feature:
BLAST of Vigun07g022500.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A3Q0FDC8|A0A3Q0FDC8_VIGRR2.595e-12794.71Serine/arginine-rich SC35-like splicing factor SCL... [more]
tr|A0A1S3V9F4|A0A1S3V9F4_VIGRR4.684e-12594.23Serine/arginine-rich SC35-like splicing factor SCL... [more]
tr|A0A0L9TU04|A0A0L9TU04_PHAAN1.743e-9396.13Serine/arginine-rich SC35-like splicing factor OS=... [more]
tr|A0A6P4CGL8|A0A6P4CGL8_ARADU4.272e-9283.15Serine/arginine-rich SC35-like splicing factor SCL... [more]
tr|A0A0S3SUP1|A0A0S3SUP1_PHAAN6.735e-9195.05RRM domain-containing protein OS=Vigna angularis v... [more]
tr|I3SR49|I3SR49_LOTJA3.933e-8978.87RRM domain-containing protein OS=Lotus japonicus O... [more]
tr|A0A2I4E0B0|A0A2I4E0B0_JUGRE6.189e-8575.81Serine/arginine-rich SC35-like splicing factor SCL... [more]
tr|A0A6M2EFK6|A0A6M2EFK6_9ROSI5.413e-8475.38RRM domain-containing protein OS=Populus davidiana... [more]
tr|A0A5N5JNS8|A0A5N5JNS8_9ROSI5.508e-8375.25RRM domain-containing protein OS=Salix brachista O... [more]
tr|A0A4U5MPD7|A0A4U5MPD7_POPAL1.700e-8274.36RRM domain-containing protein OS=Populus alba OX=4... [more]
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BLAST of Vigun07g022500.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q9LHP2|SL30A_ARATH7.712e-7263.35Serine/arginine-rich SC35-like splicing factor SCL... [more]
sp|Q9SEU4|SRC33_ARATH4.163e-6866.36Serine/arginine-rich SC35-like splicing factor SCL... [more]
sp|Q1PDV2|SRC28_ARATH8.593e-3253.85Serine/arginine-rich SC35-like splicing factor SCL... [more]
sp|Q8L3X8|SRC30_ARATH3.872e-3156.84Serine/arginine-rich SC35-like splicing factor SCL... [more]
sp|Q9R0U0|SRS10_MOUSE4.363e-2749.46Serine/arginine-rich splicing factor 10 OS=Mus mus... [more]
sp|O75494|SRS10_HUMAN4.363e-2749.46Serine/arginine-rich splicing factor 10 OS=Homo sa... [more]
sp|Q8WXF0|SRS12_HUMAN1.706e-2236.65Serine/arginine-rich splicing factor 12 OS=Homo sa... [more]
sp|Q9FMG4|SC35_ARATH2.629e-1544.57Serine/arginine-rich splicing factor SC35 OS=Arabi... [more]
sp|P30352|SRSF2_CHICK2.214e-1349.35Serine/arginine-rich splicing factor 2 OS=Gallus g... [more]
sp|Q5R1W5|SRSF2_PANTR6.126e-1349.35Serine/arginine-rich splicing factor 2 OS=Pan trog... [more]
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BLAST of Vigun07g022500.1 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|8.042e-7363.35Symbols: SCL30A, At-SCL30A | SC35-like splicing fa... [more]
|1.100e-7066.20Symbols: SCL33, At-SCL33, ATSCL33, SR33 | SC35-LIK... [more]
|1.100e-7066.20Symbols: SCL33, At-SCL33, ATSCL33, SR33 | SC35-LIK... [more]
|4.336e-6966.36Symbols: SCL33, At-SCL33, ATSCL33, SR33 | SC35-LIK... [more]
|9.780e-6662.83Symbols: SCL33, At-SCL33, ATSCL33, SR33 | SC35-LIK... [more]
|8.685e-3353.85Symbols: SCL28, At-SCL28 | SC35-like splicing fact... [more]
|8.898e-3353.85Symbols: SCL28, At-SCL28 | SC35-like splicing fact... [more]
|4.003e-3256.84Symbols: SCL30, At-SCL30 | SC35-like splicing fact... [more]
|5.138e-2455.81Symbols: SCL33, At-SCL33, ATSCL33, SR33 | SC35-LIK... [more]
|5.138e-2455.81Symbols: SCL33, At-SCL33, ATSCL33, SR33 | SC35-LIK... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna unguiculata L. Walp IT97K-499-35 genome v1.2
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 2..130
e-value: 8.9E-27
score: 95.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 40..109
e-value: 6.1E-16
score: 69.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 38..116
score: 16.858295
IPR050441RNA-binding motifPANTHERPTHR48034TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATEDcoord: 10..200
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 38..142

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2; Name=Vigun07g022500.1; organism=Vigna unguiculata; type=mRNA; length=630bp
ATGAGGGGAAGAAGCTACAGTTATAGTCCGTCACCTCCAAGGCATTATAG
CCGAAGAAGGCGCAGTCCCAGCCCTAGGGGCAGACACAGAGGACGTGATA
GAGATTTGCCAACTAGTCTTTTGGTTCGAAACCTTCACAGAGATTGTAGG
GCGGAAGATCTGCATGGTCCATTTGGCCAATTTGGTCCTGTTAAGGACGT
TTACCTGCCTCGAGATTATTATACTGGGGATCCAAGAGGTTTCGGGTTTG
TCCAGTATGTGGACCCAGCTGATGCTGCGGATGCAAAACATCACATGGAC
GGTCAAATTCTTCTTGGTCGCGAGTTAACTGTAGTGTTTGCTGAAGAGAA
CAGGAAGAAACCTTCTGAAATGAGAGCAAGGGAACGGAGAAGGGATCGAT
CATATGATTACAGGCGATCGCCTCGAACCTATTCTCCTAGTCCAGACTAT
TCACCTTCTCCAAGACGAAGACGAAATTACAGGTCAATCTCACCAAGGGG
CAGAAAATATAGCGATCGATCATACTCTAGATCACCTTATGGGTCAAGAA
GCCGCAGCAGAAGCAGGAGTTATGGCAGAAGCAGAAGTTACAGCAGGAGC
TTGAGCAGAAGTCCTGGCTACTCTAGGTGA
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protein sequence of drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2

>drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2; Name=drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2; organism=Vigna unguiculata; type=polypeptide; length=210bp
MRGRSYSYSPSPPRHYSRRRRSPSPRGRHRGRDRDLPTSLLVRNLHRDCR
AEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMD
GQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRSPRTYSPSPDY
SPSPRRRRNYRSISPRGRKYSDRSYSRSPYGSRSRSRSRSYGRSRSYSRS
LSRSPGYSR*
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mRNA from alignment at Vu07:1910296..1913443+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2; Name=Vigun07g022500.1; organism=Vigna unguiculata; type=mRNA; length=3148bp; location=Sequence derived from: Vu07:1910296..1913443+ (Vigna unguiculata
CATGGTAAGCCGTGCAACTGCATGTACTGGATCAGGCGTTCTTGGGAGGA
GAAGTTTCGCGAATATAGAAGAGCCAGGTTACAAATACTGCCAATGAATT
TACCTTTCCAAATCAAAGTCTCTCCTCTCCCCATCTCTCTGCAACAAACA
GAGATTGTGATTCGCTAATTGTTAAACAGGTAATGTTAACATCTCTCATA
TTCTTCTCATTCTATTCTTACGTCTTTCTCATCCTTGATCTTTGATTCGT
TTGTGACGAAATTGCTAATTCGTATTAAATTACGATAATTATCATCTTTA
GGTGATAAATTATAGTTCTCTAGGCATGAATTCCTCTGCCTTTTTATAAT
TTTTTTGGATTATTTTTTTTGTGAAAAGTGATTTTCATCTAGATAAAATC
GATTATGATTAGTTTTTGGCTGACTTGTTGACTATCAGAGTTGTTCTTCT
CTATGCAGTGGATCTGCATTTTTCTAATCTCCTTTTTGAAATTTGCTGAA
AGGTAATTTCAGCTGTGGATCATATTAATAATTATTAGGTTATGTGTTTT
GTACTTGTTCATTCTCCAAAACTGTTTCGGAAATTGCTGTACTCAAGGCG
ATGGAATCTTCTGCTTTTTAAATTTGGGTGAGAAGTGATTTCCGTCTGGA
TAAATTAGTTATAATTGTTTTTTTCGGCGGTGGATGTGTTGATTCTTCGG
ATTTGTTTTTATGAAATTGCTGTTCTCTTGACGTGGAATCTTCTGCCTTT
TTAGTTTTCTTTGGAAATTTGGGTCATGAGCAATTTCGGTCTGGATTAAA
TTTGTCATGATTAGTTTTATGAGTTTTAAACCAGTTGATTCTCTAAACCT
GTTTTCCAattattattattattattTTGGCAGTGGTTAGGATTTGTGCT
TTGGTTCCATCGAAGTTGTGGTGTGTTTTTAATTGTATTTTCGTATGTGT
GGATGTAGGTGCAATAACATCAAATATGAGGGGAAGAAGCTACAGTTATA
GTCCGTCACCTCCAAGGCATTATAGCCGAAGAAGGCGCAGTCCCAGCCCT
AGGGGCAGACACAGAGGACGTGATAGAGATTTGCCAACTAGTCTTTTGGT
TCGAAACCTTCACAGAGATTGTAGGTATGTTAGTCAAGGATTTTTGCATT
TCCAGTAAGTATTTTATTTTCCGTGATTTTTTGCAGTGTTTGTTTTTGTG
TGTAATGCGGATCAGGATTGTTGAGCCTTTTTCTTTGTTGCTTGAATGTT
ACTTTGGCTTATCTATTGTACGTAATGGAAGAACCATAGGTCCTAAAAAT
GGAATGTCAGAGAAGGAAAAGTTTTTTCCCATCTTGTACTACATCTATAT
ATAATTTGAACATTTTTGGTCTCAGCTTCCTGATGAAGAAGCTTTGTAAA
AAAACGAGCATCCTTTTGGGGGGAGCTGAATCGAAAATGCTTGGATTATT
TTATTTCTGAAGAAATAATGGTTACTTATTTTATCAGTATTTTGAGCGAG
TTTGTTTGTAATGCTAAACTTTTCTGCTCATTTTTCAGGGCGGAAGATCT
GCATGGTCCATTTGGCCAATTTGGTCCTGTTAAGGACGTTTACCTGCCTC
GAGATTATTATACTGGGTATGTGGTTATTGACTAAAACATGGCTCCTTGT
GTATTGAAAGATTTCTCAGCGGCCACTTTGATAAATTGCTAGTGACATTA
AACTACTATGAAACATTCAATGTTGAGTAATGCCTGAATTGGGATTTCAG
AAAATTGTGGTGGCTTTTACATAAGTATTTAGTTTTGCCACTTCTTTCTC
GGTAATAATTAATACTCCAATTATTTTATGGGAATTTGGTTGTTTTATTG
AAAGAGTTGAAGACACAAATGAAGTAATAAGAGTACTGTGTTGAAGAGAA
GAAAGAAGTAATAAGAGTACTGTGTTGAAGAGAAGAAAGAAGTAATAAGA
GTTCTATTCAAGGTTATGTAAGTATCCTTGAAGGTTTGGAAGGTTGAGTT
TGAATTCATTGTGAAGAAGTTCAAGTCTTGAAGAGAGTTCAATCTCAATT
AATTCTTTGGCTTCTACAAGGTTAGCATCCATGTGGTGTTTATTATTGAT
TTCTATGGAGTGTTGAGAGTGACTTGTGATAATTCGGAGTCAGATTCATA
TTTGCGGATATGTGCAATAAACCCACCTTCCTCATAATGCTGGTGTGTTT
ACTTGTTAAACCATGCTTATAATGTATCTGATAACCTTGAATGTTATGGT
ACAGGGATCCAAGAGGTTTCGGGTTTGTCCAGTATGTGGACCCAGCTGAT
GCTGCGGATGCAAAACATCACATGGACGGTCAAATTCTTCTTGGTCGCGA
GTTAACTGTAGTGTTTGCTGAAGAGAACAGGAAGAAACCTTCTgaaatga
gagcaagggaacggagaaggtaaggaaaTTAACACTCGGTTGCTTGTAAT
GCTGTTGTATAACTGGTATAAGTAGTAGACTAGGGAGTCACATTATCACA
TCAATATGAAAAGGGCCTTTTGTTTATTGTTACTCCATGTTTGATTCCTT
TTTTGTTTAATTTATCTAATCTCCAGGGATCGATCATATGATTACAGGCG
ATCGCCTCGAACCTATTCTCCTAGTCCAGACTATTCACCTTCTCCAAGAC
GAAGACGAAATTACAGGTTTTTGTTTTCTGTTATTACATTAGCTTATGTA
ATAAATTTAATTTCTGATGTAAATGATGGTCAGTGTTTGTACTCACCACC
TTTATTGTAATTCAGGTCAATCTCACCAAGGGGCAGAAAATATAGCGATC
GATCATACTCTAGATCACCTTATGGGTCAAGAAGCCGCAGCAGAAGCAGG
AGTTATGGCAGAAGCAGAAGTTACAGCAGGAGCTTGAGCAGAAGTCCTGG
CTACTCTAGGTGAATAGTGCGGTGGAAAGTTCTACTTTCATGTTTTTATT
CATCTTGTGTGCTGATGATGTACTTTAGATTCAGAGTGTGAGTATTTTGT
GAATTTGGTAGAAAGAATCTGTCGTCACTTACGACCTTCGTACGCCATGT
TTGATTATAATAGTTCTATTCAACCGGTGGTTAAATTAAGTTTTGATCTG
TCACATATTCTTTTTCACTGGGCTATGATTTTTTTTTTTTTTTGAACG
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Coding sequence (CDS) from alignment at Vu07:1910296..1913443+

>drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun07g022500.1.v1.2; Name=Vigun07g022500.1; organism=Vigna unguiculata; type=CDS; length=630bp; location=Sequence derived from: Vu07:1910296..1913443+ (Vigna unguiculata
ATGAGGGGAAGAAGCTACAGTTATAGTCCGTCACCTCCAAGGCATTATAG
CCGAAGAAGGCGCAGTCCCAGCCCTAGGGGCAGACACAGAGGACGTGATA
GAGATTTGCCAACTAGTCTTTTGGTTCGAAACCTTCACAGAGATTGTAGG
GCGGAAGATCTGCATGGTCCATTTGGCCAATTTGGTCCTGTTAAGGACGT
TTACCTGCCTCGAGATTATTATACTGGGGATCCAAGAGGTTTCGGGTTTG
TCCAGTATGTGGACCCAGCTGATGCTGCGGATGCAAAACATCACATGGAC
GGTCAAATTCTTCTTGGTCGCGAGTTAACTGTAGTGTTTGCTGAAGAGAA
CAGGAAGAAACCTTCTgaaatgagagcaagggaacggagaagGGATCGAT
CATATGATTACAGGCGATCGCCTCGAACCTATTCTCCTAGTCCAGACTAT
TCACCTTCTCCAAGACGAAGACGAAATTACAGGTCAATCTCACCAAGGGG
CAGAAAATATAGCGATCGATCATACTCTAGATCACCTTATGGGTCAAGAA
GCCGCAGCAGAAGCAGGAGTTATGGCAGAAGCAGAAGTTACAGCAGGAGC
TTGAGCAGAAGTCCTGGCTACTCTAGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR050441RBM
IPR035979RBD_domain_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding