Ca_01250, Ca_01250_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_01250 vs. TrEMBL
Match: K7KQC3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.937e-56 Identity = 145/271 (53.51%), Postives = 170/271 (62.73%), Query Frame = 1 Query: 151 LKSEKDVVELVESTDGIVAGGEPGGEVSRITAVPLPFEDQSVNNLVKPTSLGNDASVESGSRRRDSLDGNWGSGSGMYTIVCFPTLSDEPAVIDAKTLQSTGSLASTEAGKSNSNLPQAALADRQLSGKSETFELPSFTTLVESIHMATSPKGAGASEFHNPQQSNSTSQA--------VISEPQGRKKNEEITSKVTNWSSGKEHTPLKSLLGEAISSNNPKSLKME------------ENNGSGLTTVNSILGPESPSGQVMKGEAANE 903 +K+ +D+ S +P EVS +TAVP+ +DQ+ NNL K S DASVESGSR DSL+G WGS S + SD PAVIDA+TL STG LASTEAGKSN N A DRQ SGKSE FE PSF TLV+ ++ + + N QQ +STSQA V++E QGRKKNEEI +KVTNWS+ KEHTPLKSLLGEA S+ P+S KME E NGSGLTTVNSILGPESP QV+KGE A E Sbjct: 797 VKAAEDLAREYTSPLTTEPSAQPDREVSGLTAVPV--QDQAGNNLGKLGSSRVDASVESGSRC-DSLEGIWGSVSVL------SIQSDAPAVIDAETLPSTGLLASTEAGKSNFN-DSKATPDRQQSGKSEMFEAPSFMTLVDPGQVSPKANASEVQKGQNTQQPDSTSQAAWFPTLTQVVNESQGRKKNEEIIAKVTNWSTSKEHTPLKSLLGEAAHSSKPRSPKMEEKSVSQKSGKVPEKNGSGLTTVNSILGPESPVAQVVKGEVAKE 1057
BLAST of Ca_01250 vs. TrEMBL
Match: K7KQC2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.937e-56 Identity = 145/271 (53.51%), Postives = 170/271 (62.73%), Query Frame = 1 Query: 151 LKSEKDVVELVESTDGIVAGGEPGGEVSRITAVPLPFEDQSVNNLVKPTSLGNDASVESGSRRRDSLDGNWGSGSGMYTIVCFPTLSDEPAVIDAKTLQSTGSLASTEAGKSNSNLPQAALADRQLSGKSETFELPSFTTLVESIHMATSPKGAGASEFHNPQQSNSTSQA--------VISEPQGRKKNEEITSKVTNWSSGKEHTPLKSLLGEAISSNNPKSLKME------------ENNGSGLTTVNSILGPESPSGQVMKGEAANE 903 +K+ +D+ S +P EVS +TAVP+ +DQ+ NNL K S DASVESGSR DSL+G WGS S + SD PAVIDA+TL STG LASTEAGKSN N A DRQ SGKSE FE PSF TLV+ ++ + + N QQ +STSQA V++E QGRKKNEEI +KVTNWS+ KEHTPLKSLLGEA S+ P+S KME E NGSGLTTVNSILGPESP QV+KGE A E Sbjct: 799 VKAAEDLAREYTSPLTTEPSAQPDREVSGLTAVPV--QDQAGNNLGKLGSSRVDASVESGSRC-DSLEGIWGSVSVL------SIQSDAPAVIDAETLPSTGLLASTEAGKSNFN-DSKATPDRQQSGKSEMFEAPSFMTLVDPGQVSPKANASEVQKGQNTQQPDSTSQAAWFPTLTQVVNESQGRKKNEEIIAKVTNWSTSKEHTPLKSLLGEAAHSSKPRSPKMEEKSVSQKSGKVPEKNGSGLTTVNSILGPESPVAQVVKGEVAKE 1059
BLAST of Ca_01250 vs. TrEMBL
Match: K7KQC1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.937e-56 Identity = 145/271 (53.51%), Postives = 170/271 (62.73%), Query Frame = 1 Query: 151 LKSEKDVVELVESTDGIVAGGEPGGEVSRITAVPLPFEDQSVNNLVKPTSLGNDASVESGSRRRDSLDGNWGSGSGMYTIVCFPTLSDEPAVIDAKTLQSTGSLASTEAGKSNSNLPQAALADRQLSGKSETFELPSFTTLVESIHMATSPKGAGASEFHNPQQSNSTSQA--------VISEPQGRKKNEEITSKVTNWSSGKEHTPLKSLLGEAISSNNPKSLKME------------ENNGSGLTTVNSILGPESPSGQVMKGEAANE 903 +K+ +D+ S +P EVS +TAVP+ +DQ+ NNL K S DASVESGSR DSL+G WGS S + SD PAVIDA+TL STG LASTEAGKSN N A DRQ SGKSE FE PSF TLV+ ++ + + N QQ +STSQA V++E QGRKKNEEI +KVTNWS+ KEHTPLKSLLGEA S+ P+S KME E NGSGLTTVNSILGPESP QV+KGE A E Sbjct: 802 VKAAEDLAREYTSPLTTEPSAQPDREVSGLTAVPV--QDQAGNNLGKLGSSRVDASVESGSRC-DSLEGIWGSVSVL------SIQSDAPAVIDAETLPSTGLLASTEAGKSNFN-DSKATPDRQQSGKSEMFEAPSFMTLVDPGQVSPKANASEVQKGQNTQQPDSTSQAAWFPTLTQVVNESQGRKKNEEIIAKVTNWSTSKEHTPLKSLLGEAAHSSKPRSPKMEEKSVSQKSGKVPEKNGSGLTTVNSILGPESPVAQVVKGEVAKE 1062
BLAST of Ca_01250 vs. TrEMBL
Match: K7KQC0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.937e-56 Identity = 145/271 (53.51%), Postives = 170/271 (62.73%), Query Frame = 1 Query: 151 LKSEKDVVELVESTDGIVAGGEPGGEVSRITAVPLPFEDQSVNNLVKPTSLGNDASVESGSRRRDSLDGNWGSGSGMYTIVCFPTLSDEPAVIDAKTLQSTGSLASTEAGKSNSNLPQAALADRQLSGKSETFELPSFTTLVESIHMATSPKGAGASEFHNPQQSNSTSQA--------VISEPQGRKKNEEITSKVTNWSSGKEHTPLKSLLGEAISSNNPKSLKME------------ENNGSGLTTVNSILGPESPSGQVMKGEAANE 903 +K+ +D+ S +P EVS +TAVP+ +DQ+ NNL K S DASVESGSR DSL+G WGS S + SD PAVIDA+TL STG LASTEAGKSN N A DRQ SGKSE FE PSF TLV+ ++ + + N QQ +STSQA V++E QGRKKNEEI +KVTNWS+ KEHTPLKSLLGEA S+ P+S KME E NGSGLTTVNSILGPESP QV+KGE A E Sbjct: 804 VKAAEDLAREYTSPLTTEPSAQPDREVSGLTAVPV--QDQAGNNLGKLGSSRVDASVESGSRC-DSLEGIWGSVSVL------SIQSDAPAVIDAETLPSTGLLASTEAGKSNFN-DSKATPDRQQSGKSEMFEAPSFMTLVDPGQVSPKANASEVQKGQNTQQPDSTSQAAWFPTLTQVVNESQGRKKNEEIIAKVTNWSTSKEHTPLKSLLGEAAHSSKPRSPKMEEKSVSQKSGKVPEKNGSGLTTVNSILGPESPVAQVVKGEVAKE 1064
BLAST of Ca_01250 vs. TrEMBL
Match: K7L5Y5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 4.936e-52 Identity = 148/314 (47.13%), Postives = 185/314 (58.92%), Query Frame = 1 Query: 58 VDPLTSSVADLNTEELCI-VHGDGFSGLSSD---ELKSEKDVVELVESTDGI---------VAGGEPGGEVSRITAVPLPFEDQSVNNLVKPTSLGNDASVESGSRRRDSLDGNWGSGSGMYTIVCFPTLSDEPAVIDAKTLQSTGSLASTEAGKSNSNLPQAALADRQLSGKSETFELPSFTTLVESIHMATSPKGAGASEFHNPQQSNSTSQA--------VISEPQGRKKNEEITSKVTNWSSGKEHTPLKSLLGEAISSNNPKSLKME-----------ENNGSGLTTVNSILGPESPSGQVMKGEAANE 903 ++PL S D+ +E+ I + + S D E + +D LV++T+ + V +P EVS +P +DQ+ NNL K S DASV+SGSR DSL+GNWGS S + SD PAV DA+TL STG LAST GKS+ N +A DRQ SG SE FE PSF TLV+ ++ + + N Q ++STSQA V++E QGRKKNEEI +KVTNWS+ KEHTPLKSLLGEA S+ P+S KME E NGSGLTTVNSILGPESP QV+KGEAA E Sbjct: 751 INPLPGSQKDIKEDEININIKLNEEYNKSVDTYTESRQAQDAGLLVKATEDLAREYTSLTTVPSAQPDREVSNA----VPVQDQTGNNLGKLGSSRVDASVDSGSRC-DSLEGNWGSVSVL------SMQSDAPAVTDAETLPSTGLLAST--GKSSLNNSKAT-PDRQQSGNSEMFEPPSFMTLVDPSQVSPKASASEVQKGQNTQHTDSTSQAAWFPTLTQVVNESQGRKKNEEIIAKVTNWSTSKEHTPLKSLLGEAAHSSKPRSPKMENSVNQKSGKVLEKNGSGLTTVNSILGPESPVAQVVKGEAAKE 1050
BLAST of Ca_01250 vs. TrEMBL
Match: K7L5Y4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 4.936e-52 Identity = 148/314 (47.13%), Postives = 185/314 (58.92%), Query Frame = 1 Query: 58 VDPLTSSVADLNTEELCI-VHGDGFSGLSSD---ELKSEKDVVELVESTDGI---------VAGGEPGGEVSRITAVPLPFEDQSVNNLVKPTSLGNDASVESGSRRRDSLDGNWGSGSGMYTIVCFPTLSDEPAVIDAKTLQSTGSLASTEAGKSNSNLPQAALADRQLSGKSETFELPSFTTLVESIHMATSPKGAGASEFHNPQQSNSTSQA--------VISEPQGRKKNEEITSKVTNWSSGKEHTPLKSLLGEAISSNNPKSLKME-----------ENNGSGLTTVNSILGPESPSGQVMKGEAANE 903 ++PL S D+ +E+ I + + S D E + +D LV++T+ + V +P EVS +P +DQ+ NNL K S DASV+SGSR DSL+GNWGS S + SD PAV DA+TL STG LAST GKS+ N +A DRQ SG SE FE PSF TLV+ ++ + + N Q ++STSQA V++E QGRKKNEEI +KVTNWS+ KEHTPLKSLLGEA S+ P+S KME E NGSGLTTVNSILGPESP QV+KGEAA E Sbjct: 756 INPLPGSQKDIKEDEININIKLNEEYNKSVDTYTESRQAQDAGLLVKATEDLAREYTSLTTVPSAQPDREVSNA----VPVQDQTGNNLGKLGSSRVDASVDSGSRC-DSLEGNWGSVSVL------SMQSDAPAVTDAETLPSTGLLAST--GKSSLNNSKAT-PDRQQSGNSEMFEPPSFMTLVDPSQVSPKASASEVQKGQNTQHTDSTSQAAWFPTLTQVVNESQGRKKNEEIIAKVTNWSTSKEHTPLKSLLGEAAHSSKPRSPKMENSVNQKSGKVLEKNGSGLTTVNSILGPESPVAQVVKGEAAKE 1055
BLAST of Ca_01250 vs. TrEMBL
Match: K7L5Y7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 6.245e-47 Identity = 143/306 (46.73%), Postives = 174/306 (56.86%), Query Frame = 1 Query: 58 VDPLTSSVADLNTEELCI-VHGDGFSGLSSD---ELKSEKDVVELVESTDGI---------VAGGEPGGEVSRITAVPLPFEDQSVNNLVKPTSLGNDASVESGSRRRDSLDGNWGSGSGMYTIVCFPTLSDEPAVIDAKTLQSTGSLASTEAGKSNSNLPQAALADRQLSGKSETFELPSFTTLVESIHMATSPKGAGASEFHNPQQSNSTSQAVISEPQGRKKNEEITSKVTNWSSGKEHTPLKSLLGEAISSNNPKSLKME-----------ENNGSGLTTVNSILGPESPSGQVMKGEAANE 903 ++PL S D+ +E+ I + + S D E + +D LV++T+ + V +P EVS +P +DQ+ NNL K S DASV+SGSR DSL+GNWGS S + SD PAV DA+TL STG LAST GKS+ N +A DRQ SG SE FE PSF TLV+ P Q V++E QGRKKNEEI +KVTNWS+ KEHTPLKSLLGEA S+ P+S KME E NGSGLTTVNSILGPESP QV+KGEAA E Sbjct: 751 INPLPGSQKDIKEDEININIKLNEEYNKSVDTYTESRQAQDAGLLVKATEDLAREYTSLTTVPSAQPDREVSNA----VPVQDQTGNNLGKLGSSRVDASVDSGSRC-DSLEGNWGSVSVL------SMQSDAPAVTDAETLPSTGLLAST--GKSSLNNSKAT-PDRQQSGNSEMFEPPSFMTLVD------------------PSQ-------VVNESQGRKKNEEIIAKVTNWSTSKEHTPLKSLLGEAAHSSKPRSPKMENSVNQKSGKVLEKNGSGLTTVNSILGPESPVAQVVKGEAAKE 1017
BLAST of Ca_01250 vs. TrEMBL
Match: K7L5Y6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 6.245e-47 Identity = 143/306 (46.73%), Postives = 174/306 (56.86%), Query Frame = 1 Query: 58 VDPLTSSVADLNTEELCI-VHGDGFSGLSSD---ELKSEKDVVELVESTDGI---------VAGGEPGGEVSRITAVPLPFEDQSVNNLVKPTSLGNDASVESGSRRRDSLDGNWGSGSGMYTIVCFPTLSDEPAVIDAKTLQSTGSLASTEAGKSNSNLPQAALADRQLSGKSETFELPSFTTLVESIHMATSPKGAGASEFHNPQQSNSTSQAVISEPQGRKKNEEITSKVTNWSSGKEHTPLKSLLGEAISSNNPKSLKME-----------ENNGSGLTTVNSILGPESPSGQVMKGEAANE 903 ++PL S D+ +E+ I + + S D E + +D LV++T+ + V +P EVS +P +DQ+ NNL K S DASV+SGSR DSL+GNWGS S + SD PAV DA+TL STG LAST GKS+ N +A DRQ SG SE FE PSF TLV+ P Q V++E QGRKKNEEI +KVTNWS+ KEHTPLKSLLGEA S+ P+S KME E NGSGLTTVNSILGPESP QV+KGEAA E Sbjct: 756 INPLPGSQKDIKEDEININIKLNEEYNKSVDTYTESRQAQDAGLLVKATEDLAREYTSLTTVPSAQPDREVSNA----VPVQDQTGNNLGKLGSSRVDASVDSGSRC-DSLEGNWGSVSVL------SMQSDAPAVTDAETLPSTGLLAST--GKSSLNNSKAT-PDRQQSGNSEMFEPPSFMTLVD------------------PSQ-------VVNESQGRKKNEEIIAKVTNWSTSKEHTPLKSLLGEAAHSSKPRSPKMENSVNQKSGKVLEKNGSGLTTVNSILGPESPVAQVVKGEAAKE 1022
BLAST of Ca_01250 vs. TrEMBL
Match: M5X981_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001154mg PE=4 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.183e-29 Identity = 98/243 (40.33%), Postives = 123/243 (50.62%), Query Frame = 1 Query: 259 FEDQSVNNLVKPTSLGNDASVESGSRRRDSLDGNWGSGSGMYTIVCFPTLSDEPAVIDAKTLQSTGSLASTEAGKSNSNLPQAALADRQLSGKSETFELPSFTTLVESIHMATSPKGAGASEFH---NPQQSNSTS---------QAVISEPQGRKKNEEITSKVTNWSSGKEHTPLKSLLGEAISSNNPKSLKMEE----------------NNGSGLTTVNSILGPESPSGQVMKGEAANE 903 F+++S N VK V + + DSL+GNWGS S LS + DA+ + T S S E KS A ++RQ KS+ FE PSF TLVE + + A A+E H NP+Q V++E GRKKNEEI +KVTNWS+GK+HTPLK+LLGEA N KS +E + G G TTVNSILGPESP+GQ K E A E Sbjct: 638 FQEESDKNFVKQQLSSPALDVVDSNSQTDSLEGNWGSVS---------VLSIQS---DAQAVPPTDSQTSVEEKKSR------AASERQHPEKSDMFEAPSFMTLVEP--RGVNDQKATAAEIHTAHNPEQPKPAPLQAGWFPSISHVVNESPGRKKNEEIIAKVTNWSTGKQHTPLKNLLGEAYLENKAKSPTQKESQAPAPQRDDKAVKVKDGGPGATTVNSILGPESPTGQASKKENAKE 860
BLAST of Ca_01250 vs. TrEMBL
Match: Q2Z1Z1_PRUMU (Hypothetical salt-inducible protein (Fragment) OS=Prunus mume GN=Pm8 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.002e-28 Identity = 96/243 (39.51%), Postives = 122/243 (50.21%), Query Frame = 1 Query: 259 FEDQSVNNLVKPTSLGNDASVESGSRRRDSLDGNWGSGSGMYTIVCFPTLSDEPAVIDAKTLQSTGSLASTEAGKSNSNLPQAALADRQLSGKSETFELPSFTTLVESIHMATSPKGAGASEFH---NPQQSNSTS---------QAVISEPQGRKKNEEITSKVTNWSSGKEHTPLKSLLGEAISSNNPKSLKMEE----------------NNGSGLTTVNSILGPESPSGQVMKGEAANE 903 F+++S N VK + V + + DSL+GNWGS S LS + DA+ + S S E KS A ++RQ KS+ FE PSF TLVE + + A A+E H NP+Q V++E GRKKNEEI +KVTNWS+GK+HT LK+LLGEA N KS +E + G G TTVNSILGPESP+GQ K E A E Sbjct: 53 FQEESDKNFVKQLLSSSALDVVDSNSQTDSLEGNWGSVS---------VLSIQS---DAQAVPPADSQTSVEEKKSK------AASERQYPEKSDMFEAPSFMTLVEP--RGVNDQKATAAEIHTAHNPEQPKPAPLQAGWFPSISHVVNESPGRKKNEEIIAKVTNWSTGKQHTALKNLLGEAYLENKAKSPTQKESQTPAPQRDDKAVKVKDGGPGATTVNSILGPESPTGQASKKENAKE 275 The following BLAST results are available for this feature:
BLAST of Ca_01250 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 17
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BLAST of Ca_01250 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_01250_v1.0_kabuli ID=Ca_01250_v1.0_kabuli; Name=Ca_01250; organism=Cicer arietinum; type=mRNA; length=906bpback to top protein sequence of Ca_01250_v1.0_kabuli >Ca_01250_v1.0_kabuli ID=Ca_01250_v1.0_kabuli; Name=Ca_01250_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=301bpback to top mRNA from alignment at Ca3:38914470..38917096- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_01250_v1.0_kabuli ID=Ca_01250_v1.0_kabuli; Name=Ca_01250; organism=Cicer arietinum; type=mRNA; length=2627bp; location=Sequence derived from: Ca3:38914470..38917096- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca3:38914470..38917096- >Ca_01250_v1.0_kabuli ID=Ca_01250_v1.0_kabuli; Name=Ca_01250; organism=Cicer arietinum; type=CDS; length=906bp; location=Sequence derived from: Ca3:38914470..38917096- (Cicer arietinumback to top |