Ca_07173, Ca_07173_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_07173 vs. TrEMBL
Match: Q2HW51_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_7g089940 PE=4 SV=2) HSP 1 Score: 279.256 bits (713), Expect = 3.190e-73 Identity = 136/157 (86.62%), Postives = 149/157 (94.90%), Query Frame = 1 Query: 1 MGQSLKKLTPGTDEKKAKELGPIIDKFYENNLKNPSNNFPEFYRGVCEIVEELNKKLGYTQFKLPKTEDLRKAYQEHHQGKDKELTKAEFEDIMREVIKESGFTGVGAKEALLYIFGVPVTALFVKQRVMPQAIPNEFFIPGITSLTVLVLAALNKI 471 MGQSLKKLTPGTDEKKAKELGPIIDKFYE ++KN S +FPEFYRGVCEIVEELNKK GYTQFKLP T++L KAY EHH+GK+KELTKAEF++IM+E+IKESGFTGVGAKEALLYIFGVPVTALFVKQRV PQAIPNEFFIPGITS+TVL+LAALNKI Sbjct: 1 MGQSLKKLTPGTDEKKAKELGPIIDKFYEKDIKNASRDFPEFYRGVCEIVEELNKKFGYTQFKLPGTKELEKAYNEHHKGKNKELTKAEFQEIMKEMIKESGFTGVGAKEALLYIFGVPVTALFVKQRVGPQAIPNEFFIPGITSVTVLILAALNKI 157
BLAST of Ca_07173 vs. TrEMBL
Match: B7FGJ4_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 1.212e-72 Identity = 135/157 (85.99%), Postives = 148/157 (94.27%), Query Frame = 1 Query: 1 MGQSLKKLTPGTDEKKAKELGPIIDKFYENNLKNPSNNFPEFYRGVCEIVEELNKKLGYTQFKLPKTEDLRKAYQEHHQGKDKELTKAEFEDIMREVIKESGFTGVGAKEALLYIFGVPVTALFVKQRVMPQAIPNEFFIPGITSLTVLVLAALNKI 471 MGQSLKKLTPGTDEKKAKELGPIIDKFYE ++KN S +FPEFYRGVCEIVEELNKK GYTQFKLP T++L KAY EHH+GK+KEL KAEF++IM+E+IKESGFTGVGAKEALLYIFGVPVTALFVKQRV PQAIPNEFFIPGITS+TVL+LAALNKI Sbjct: 1 MGQSLKKLTPGTDEKKAKELGPIIDKFYEKDIKNASRDFPEFYRGVCEIVEELNKKFGYTQFKLPGTKELEKAYNEHHKGKNKELAKAEFQEIMKEMIKESGFTGVGAKEALLYIFGVPVTALFVKQRVGPQAIPNEFFIPGITSVTVLILAALNKI 157
BLAST of Ca_07173 vs. TrEMBL
Match: C6SWB5_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 1.142e-46 Identity = 96/160 (60.00%), Postives = 123/160 (76.88%), Query Frame = 1 Query: 1 MGQSLKKLTPGTDEKKAKELGPIIDKFYENNLKNPSNNFPEFYRGVCEIVEELNKKLGYTQFKLPKTEDLRKAYQEHHQGKD---KELTKAEFEDIMREVIKESGFTGVGAKEALLYIFGVPVTALFVKQRVMPQAIPNEFFIPGITSLTVLVLAALNKI 471 MG SL KL PG D+KK +EL PII++ Y+ +KN + F EFY VCEIVE+LN+KLG TQ KLP+T+ + K Y++ D K LTKAEF++IM+ ++K SGFTG+GAKEA+L IFGVP+ ALF+KQRVMP+A+ +EFFIPG+TS TV LAALNKI Sbjct: 1 MGLSLPKLAPGADKKKHEELVPIIEEIYKEKVKN-AKEFSEFYHAVCEIVEQLNEKLGNTQIKLPETKAIEKEYRKRRGDNDTDKKPLTKAEFQEIMQNLVKTSGFTGIGAKEAILCIFGVPLAALFIKQRVMPEAVRDEFFIPGVTSATVFTLAALNKI 159
BLAST of Ca_07173 vs. TrEMBL
Match: K7KEP4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 2.545e-46 Identity = 95/160 (59.38%), Postives = 121/160 (75.62%), Query Frame = 1 Query: 1 MGQSLKKLTPGTDEKKAKELGPIIDKFYENNLKNPSNNFPEFYRGVCEIVEELNKKLGYTQFKLPKTEDLRKAYQEHHQGKD---KELTKAEFEDIMREVIKESGFTGVGAKEALLYIFGVPVTALFVKQRVMPQAIPNEFFIPGITSLTVLVLAALNKI 471 MG SL KL PG D+KK +ELGPIID+ YE +K+ + F EFY VCEIVE+LN+KLG TQ KLP+T+ + K Y++ D K L KAEF++IM+ ++K SGFTG+GAKEA+L IFGVP+ AL +KQRVMP+ + +EFFIPG+TS TV LAALNKI Sbjct: 1 MGLSLPKLAPGADKKKLEELGPIIDEIYEEKVKD-AKKFSEFYHAVCEIVEQLNEKLGNTQIKLPETKAIEKEYRKRRGDDDTNKKPLAKAEFQEIMQNLVKTSGFTGIGAKEAILCIFGVPLAALLIKQRVMPEVVRDEFFIPGVTSATVFTLAALNKI 159
BLAST of Ca_07173 vs. TrEMBL
Match: M5VTK9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024895mg PE=4 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 1.069e-44 Identity = 95/161 (59.01%), Postives = 119/161 (73.91%), Query Frame = 1 Query: 1 MGQSLKKLTPGTDEKKAKELGPIIDKFYENNLKNPSNN--FPEFYRGVCEIVEELNKKLGYTQFKLPKTEDLRKAYQEHH-QGKDKELTKAEFEDIMREVIKESGFTGVG-AKEALLYIFGVPVTALFVKQRVMPQAIPNEFFIPGITSLTVLVLAALNKI 471 MGQ+LKKL PGT+E K KE+GPII+ Y+ + F FYR +CE VEE+NK+LG TQF LP L++ Y++HH QGK + LT+ EF+ I ++VI +GFTGVG AK+ L+YIFGVP+TALFVKQR+MP+ IPNE FIP ITS TV VLA LNKI Sbjct: 1 MGQTLKKLAPGTEENKIKEIGPIIENCYKTHFAGTVEKPTFTNFYRAICETVEEINKQLGNTQFCLPTESKLKQKYEDHHDQGKGRSLTREEFQRIFQDVIFGTGFTGVGGAKDTLIYIFGVPLTALFVKQRLMPRVIPNEIFIPCITSATVFVLAKLNKI 161
BLAST of Ca_07173 vs. TrEMBL
Match: D7LGK1_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483189 PE=4 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.092e-32 Identity = 76/162 (46.91%), Postives = 110/162 (67.90%), Query Frame = 1 Query: 1 MGQSLKKLTPGTDEKKAKELGPIIDKFYENNLKNPSNN----FPEFYRGVCEIVEELNKKLGYTQFKLPKTEDLRKAYQEHHQGKDKELTKAEFEDIMREVIKESGFTGV-GAKEALLYIFGVPVTALFVKQRVMPQAIPNEFFIPGITSLTVLVLAALNKI 471 MGQ+L G E K+L +++ Y L+ +++ F +FYR V E VEE+N++LG TQ K+P E L++AY+ H+ G+ K+L+K EF+ +++EV+ +GFTGV G KE LL+IFGVP A+F+K R+ P +IPN+ FIP ITS TV +LA LNKI Sbjct: 1 MGQALDT-AKGKGEVDGKDLEAMVENCYRKRLEEQNDDQEWSFGDFYRIVAEAVEEINRRLGGTQLKVPSVEKLQQAYEIHNLGEGKKLSKDEFQKLLQEVLIGAGFTGVGGVKEFLLFIFGVPAIAVFIKNRIAPTSIPNDLFIPAITSATVFLLAKLNKI 161
BLAST of Ca_07173 vs. TrEMBL
Match: O80667_ARATH (Expressed protein OS=Arabidopsis thaliana GN=AT2G41200 PE=2 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 4.660e-32 Identity = 76/162 (46.91%), Postives = 109/162 (67.28%), Query Frame = 1 Query: 1 MGQSLKKLTPGTDEKKAKELGPIIDKFYENNLKNPSNN----FPEFYRGVCEIVEELNKKLGYTQFKLPKTEDLRKAYQEHHQGKDKELTKAEFEDIMREVIKESGFTGV-GAKEALLYIFGVPVTALFVKQRVMPQAIPNEFFIPGITSLTVLVLAALNKI 471 MGQ+L G E AK+L + + Y L+ +++ F +FYR V E VEE+N++LG TQ K+P E L++AY+ H+ G+ K+L+K EF+ +++EV+ GFTGV G KE LL+IFGVP A+F+K R+ P ++PN+ FIP ITS TV +LA LNKI Sbjct: 1 MGQALNT-AKGKGEVDAKDLEAMAENCYRKRLEEKNDDQEWSFGDFYRIVAEAVEEINRRLGGTQLKVPSVEKLQQAYEIHNLGQGKKLSKDEFQKLLQEVLIGVGFTGVGGVKEFLLFIFGVPAIAVFIKNRIAPTSVPNDLFIPAITSATVFLLAKLNKI 161
BLAST of Ca_07173 vs. TrEMBL
Match: B9SLP8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0502320 PE=4 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 4.660e-32 Identity = 69/145 (47.59%), Postives = 98/145 (67.59%), Query Frame = 1 Query: 40 EKKAKELGPIIDKFYENNLKNPSN-NFPEFYRGVCEIVEELNKKLGYTQFKLPKTEDLRKAYQEHHQGKDKELTKAEFEDIMREVIKESGFTGVGAKEALLYIFGVPVTALFVKQRVMPQAIPNEFFIPGITSLTVLVLAALNKI 471 + K KE+G I + Y+ + +FYR VC+ V+E+NKK+ TQF+ P E L++ YQ H++ K K LTK EF+ I++EVI +GFTG G+K+ L++FGVP A F+KQRV P+A+PN+ IP +TS TV +LA LNKI Sbjct: 7 QNKEKEIGCTIGECYDKFFVDTEVWELADFYRAVCQTVDEINKKIKSTQFRTPDAEKLKEVYQIHYKDKGKHLTKEEFQKILQEVIIHTGFTGFGSKDIFLFLFGVPAAAFFIKQRVAPKAVPNDVLIPTVTSATVYLLAKLNKI 151
BLAST of Ca_07173 vs. TrEMBL
Match: B9H8U6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_761997 PE=4 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 3.945e-31 Identity = 83/214 (38.79%), Postives = 111/214 (51.87%), Query Frame = 1 Query: 1 MGQSLKKLTPG-----------------------------------TDEKKAKELGPIIDKFYENNLKNPSN----------------------NFPEFYRGVCEIVEELNKKLGYTQFKLPKTEDLRKAYQEHHQGKDKELTKAEFEDIMREVIKESGFTGVGAKEALLYIFGVPVTALFVKQRVMPQAIPNEFFIPGITSLTVLVLAALNKI 471 MGQSLKKL PG ++E K +E+G II+ YE +N + P F R VCEIV+E+N L TQ +LP E+LR+ Y +H K K L K +F+ I++EVI SGFTG G+K+ L+IFG+P+ F+KQRV P++IPNE FIPG+TS +V +LA LNKI Sbjct: 1 MGQSLKKLAPGLLSSYFKARALNFEGVDELLGLLSILSKEIGATERSEENKEREIGHIIESKYEKYFGEEANKKMHSAHDPQSSSHEPSKEEITSAPYFIRAVCEIVQEINISLKSTQLRLPDAENLREIYIKHSLDKGKHLEKDDFQKIIQEVIIHSGFTGFGSKDTFLFIFGIPLITYFIKQRVAPKSIPNEVFIPGVTSASVYLLAKLNKI 214
BLAST of Ca_07173 vs. TrEMBL
Match: M4C7P0_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra000218 PE=4 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.269e-29 Identity = 70/162 (43.21%), Postives = 105/162 (64.81%), Query Frame = 1 Query: 1 MGQSLKKLTPGTDEKKAKELGPIIDKFYENNLKNPSNN----FPEFYRGVCEIVEELNKKLGYTQFKLPKTEDLRKAYQEHHQGKDKELTKAEFEDIMREVIKESGFTGV-GAKEALLYIFGVPVTALFVKQRVMPQAIPNEFFIPGITSLTVLVLAALNKI 471 MGQ+L G E K+L + + Y L+ ++ F +FYR V E VEE+N++LG TQ K+P + L++AY+ H+ G+ K+++K EF+ +++EV+ +GFTGV G KE LL+IFGVP +F+K R+ P + PN+ IP +TS TV +LA LNKI Sbjct: 1 MGQALNT-AKGNGELNGKDLETMAENCYRKRLEEQDDDQEWSFGDFYRIVDEAVEEINRRLGGTQLKVPSVDKLQEAYERHNLGEGKKISKDEFQKLLQEVLIGAGFTGVGGVKEFLLFIFGVPALTVFLKNRIAPTSFPNDLLIPAVTSATVFLLAKLNKI 161 The following BLAST results are available for this feature:
BLAST of Ca_07173 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25 Position : 0 Zoom : x 1
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BLAST of Ca_07173 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_07173_v1.0_kabuli ID=Ca_07173_v1.0_kabuli; Name=Ca_07173; organism=Cicer arietinum; type=mRNA; length=474bpback to top protein sequence of Ca_07173_v1.0_kabuli >Ca_07173_v1.0_kabuli ID=Ca_07173_v1.0_kabuli; Name=Ca_07173_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=157bpback to top mRNA from alignment at Ca3:28645686..28646633+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_07173_v1.0_kabuli ID=Ca_07173_v1.0_kabuli; Name=Ca_07173; organism=Cicer arietinum; type=mRNA; length=948bp; location=Sequence derived from: Ca3:28645686..28646633+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca3:28645686..28646633+ >Ca_07173_v1.0_kabuli ID=Ca_07173_v1.0_kabuli; Name=Ca_07173; organism=Cicer arietinum; type=CDS; length=474bp; location=Sequence derived from: Ca3:28645686..28646633+ (Cicer arietinumback to top |