Ca_14446, Ca_14446_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_14446 vs. TrEMBL
Match: K7M4H4_SOYBN (Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.637e-40 Identity = 86/108 (79.63%), Postives = 95/108 (87.96%), Query Frame = 1 Query: 4 IPGNDMLYYGDSSYKQELVSLSKVVLENLICVVQQEPSKTARGSMALEACNCVASSFTLSNEVSSICLTLIETAKSCLSAQDRCLQSTIRLVNKQLPTFAGTMVSTSV 327 IPGNDMLYYGDSSY QELVSLSK+VLENL+ VQQEPS+ ARG MALEACNC+ASSF LSNE+ S CLTL+ETAKSCLSA+DR LQSTI+L+NKQ PT GTMVST V Sbjct: 844 IPGNDMLYYGDSSYNQELVSLSKLVLENLLSAVQQEPSQAARGIMALEACNCIASSFMLSNELLSSCLTLVETAKSCLSAKDRYLQSTIQLLNKQSPTSVGTMVSTFV 951
BLAST of Ca_14446 vs. TrEMBL
Match: K7M4H3_SOYBN (Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.637e-40 Identity = 86/108 (79.63%), Postives = 95/108 (87.96%), Query Frame = 1 Query: 4 IPGNDMLYYGDSSYKQELVSLSKVVLENLICVVQQEPSKTARGSMALEACNCVASSFTLSNEVSSICLTLIETAKSCLSAQDRCLQSTIRLVNKQLPTFAGTMVSTSV 327 IPGNDMLYYGDSSY QELVSLSK+VLENL+ VQQEPS+ ARG MALEACNC+ASSF LSNE+ S CLTL+ETAKSCLSA+DR LQSTI+L+NKQ PT GTMVST V Sbjct: 845 IPGNDMLYYGDSSYNQELVSLSKLVLENLLSAVQQEPSQAARGIMALEACNCIASSFMLSNELLSSCLTLVETAKSCLSAKDRYLQSTIQLLNKQSPTSVGTMVSTFV 952
BLAST of Ca_14446 vs. TrEMBL
Match: F6HEQ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g00870 PE=4 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.589e-27 Identity = 61/99 (61.62%), Postives = 83/99 (83.84%), Query Frame = 1 Query: 4 IPGNDMLYYGDSSYKQELVSLSKVVLENLICVVQQEPSKTARGSMALEACNCVASSFTLSNEVSSICLTLIETAKSCLSAQDRCLQSTIRLVNKQLPTF 300 I GND+L++GDS+Y Q+LVSLS+ VLE L V+QQEPS+ ARGSMALEACNC+ASSF +S E+S IC L+ETA+ CLS+ ++ LQST++L+ ++LP+F Sbjct: 639 ILGNDLLFFGDSTYLQDLVSLSEFVLEELCNVIQQEPSQAARGSMALEACNCIASSFKVSPEISPICSKLMETAQLCLSSNNKYLQSTMKLLGERLPSF 737
BLAST of Ca_14446 vs. TrEMBL
Match: A5C2C7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003049 PE=4 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.589e-27 Identity = 61/99 (61.62%), Postives = 83/99 (83.84%), Query Frame = 1 Query: 4 IPGNDMLYYGDSSYKQELVSLSKVVLENLICVVQQEPSKTARGSMALEACNCVASSFTLSNEVSSICLTLIETAKSCLSAQDRCLQSTIRLVNKQLPTF 300 I GND+L++GDS+Y Q+LVSLS+ VLE L V+QQEPS+ ARGSMALEACNC+ASSF +S E+S IC L+ETA+ CLS+ ++ LQST++L+ ++LP+F Sbjct: 403 ILGNDLLFFGDSTYLQDLVSLSEFVLEELCNVIQQEPSQAARGSMALEACNCIASSFKVSPEISPICSKLMETAQLCLSSNNKYLQSTMKLLGERLPSF 501
BLAST of Ca_14446 vs. TrEMBL
Match: B9GJD9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_753181 PE=4 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 8.720e-26 Identity = 56/96 (58.33%), Postives = 75/96 (78.12%), Query Frame = 1 Query: 4 IPGNDMLYYGDSSYKQELVSLSKVVLENLICVVQQEPSKTARGSMALEACNCVASSFTLSNEVSSICLTLIETAKSCLSAQDRCLQSTIRLVNKQL 291 I GND+L++GD SY E+ +LS+ VL+NLI ++QEP K ARG+MALEACNC+ASSF + ++ +C LIETA+ CLSA DR LQSTI+ +N+QL Sbjct: 191 IMGNDLLFFGDPSYAHEIAALSECVLQNLISFIEQEPPKAARGTMALEACNCIASSFVVCQDILEVCWKLIETARLCLSADDRYLQSTIKYLNEQL 286
BLAST of Ca_14446 vs. TrEMBL
Match: B9STX6_RICCO (Esophageal cancer associated protein, putative OS=Ricinus communis GN=RCOM_0752350 PE=4 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.139e-25 Identity = 58/99 (58.59%), Postives = 76/99 (76.77%), Query Frame = 1 Query: 4 IPGNDMLYYGDSSYKQELVSLSKVVLENLICVVQQEPSKTARGSMALEACNCVASSFTLSNEVSSICLTLIETAKSCLSAQDRCLQSTIRLVNKQLPTF 300 I GND+LY+GDSSY ELVS+S+ VL NL+ ++ EPSK ARGS+ALEACNC+A SF +S ++ +C LIETA+ CLS DR LQSTI+ +++ LP F Sbjct: 819 ILGNDLLYFGDSSYVHELVSMSESVLWNLVKFIELEPSKAARGSLALEACNCIALSFKVSEDILQVCWKLIETAELCLSTNDRFLQSTIKYLDEHLPNF 917
BLAST of Ca_14446 vs. TrEMBL
Match: R0IQV1_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10008246mg PE=4 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.223e-21 Identity = 47/88 (53.41%), Postives = 70/88 (79.55%), Query Frame = 1 Query: 4 IPGNDMLYYGDSSYKQELVSLSKVVLENLICVVQQEPSKTARGSMALEACNCVASSFTLSNEVSSICLTLIETAKSCLSAQDRCLQST 267 I GND+L++GDSSYKQELVS +++VL L+ +++E S+ RG++ALEACNC++S+ ++ +VS +CL L+ETAK CL A DR ++ST Sbjct: 824 IIGNDLLFFGDSSYKQELVSFTQLVLGELLNAIEKESSQIVRGNLALEACNCISSALVMNEKVSQVCLRLLETAKGCLGANDRYMEST 911
BLAST of Ca_14446 vs. TrEMBL
Match: F4I6L0_ARATH (Uncharacterized protein OS=Arabidopsis thaliana GN=AT1G50730 PE=4 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.223e-21 Identity = 47/88 (53.41%), Postives = 70/88 (79.55%), Query Frame = 1 Query: 4 IPGNDMLYYGDSSYKQELVSLSKVVLENLICVVQQEPSKTARGSMALEACNCVASSFTLSNEVSSICLTLIETAKSCLSAQDRCLQST 267 I GN++L++GDSSYKQELVS +++VL L+ ++QE S+ +RG+MALEACNC++S+ ++ +V +CL L+ETAK CL A DR ++ST Sbjct: 826 IIGNELLFFGDSSYKQELVSCTQLVLSELLDAIEQESSQISRGNMALEACNCISSALVMNEKVKELCLRLLETAKGCLGANDRYIEST 913
BLAST of Ca_14446 vs. TrEMBL
Match: M4DQS9_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra018872 PE=4 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 4.191e-20 Identity = 53/113 (46.90%), Postives = 77/113 (68.14%), Query Frame = 1 Query: 4 IPGNDMLYYGDSSYKQELVSLSKVVLENLICVVQQEPSKTARGSMALEACNCVASSFTLSNEVSSICLTLIETAKSCLSAQD------RCLQSTIRLVNKQLPTFAGTMVSTS 324 I GND+L++GDSSYK ELVS +++V+ L+ ++QE S+ ARG++ALEACNC++S+ ++ +VS +CL L+ETAK CL A D R + T L KQ+ F + STS Sbjct: 811 IIGNDLLFFGDSSYKNELVSWTQLVVGELVDAIEQESSQIARGNIALEACNCISSALVMNEKVSQLCLRLLETAKGCLGATDSTSVLNRHAKQTESLGRKQVFLFLSSSPSTS 923
BLAST of Ca_14446 vs. TrEMBL
Match: Q9C6T6_ARATH (Putative uncharacterized protein F4M15.4 OS=Arabidopsis thaliana GN=F4M15.4 PE=4 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.593e-19 Identity = 44/82 (53.66%), Postives = 65/82 (79.27%), Query Frame = 1 Query: 4 IPGNDMLYYGDSSYKQELVSLSKVVLENLICVVQQEPSKTARGSMALEACNCVASSFTLSNEVSSICLTLIETAKSCLSAQD 249 I GN++L++GDSSYKQELVS +++VL L+ ++QE S+ +RG+MALEACNC++S+ ++ +V +CL L+ETAK CL A D Sbjct: 826 IIGNELLFFGDSSYKQELVSCTQLVLSELLDAIEQESSQISRGNMALEACNCISSALVMNEKVKELCLRLLETAKGCLGAND 907 The following BLAST results are available for this feature:
BLAST of Ca_14446 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 15
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BLAST of Ca_14446 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_14446_v1.0_kabuli ID=Ca_14446_v1.0_kabuli; Name=Ca_14446; organism=Cicer arietinum; type=mRNA; length=330bpback to top protein sequence of Ca_14446_v1.0_kabuli >Ca_14446_v1.0_kabuli ID=Ca_14446_v1.0_kabuli; Name=Ca_14446_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=109bpback to top mRNA from alignment at Ca4:23338997..23340763+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_14446_v1.0_kabuli ID=Ca_14446_v1.0_kabuli; Name=Ca_14446; organism=Cicer arietinum; type=mRNA; length=1767bp; location=Sequence derived from: Ca4:23338997..23340763+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca4:23338997..23340763+ >Ca_14446_v1.0_kabuli ID=Ca_14446_v1.0_kabuli; Name=Ca_14446; organism=Cicer arietinum; type=CDS; length=330bp; location=Sequence derived from: Ca4:23338997..23340763+ (Cicer arietinumback to top |