Ca_01794, Ca_01794_v1.0_kabuli (mRNA) Cicer arietinum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_01794 vs. TrEMBL
Match: I3SNQ0_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 4.434e-38 Identity = 81/126 (64.29%), Postives = 94/126 (74.60%), Query Frame = 1
Query: 1 MGSENEIPLLDFRTVNGVTLEEGGERWKEMSKKVIEAFESHGCFFLLSDQIPNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTT-EKFTNLMWPQGNPIF 375
M +E+EIP+LDFR +GVTLE+G E WKEMSKKV EAFES GCF L D+I L Q+FT MKSLF+LPE+TK+KF K YRGY S+ IP+ QSFGID L DTT + F NLMWPQGNPIF
Sbjct: 1 MENESEIPILDFRRSSGVTLEKGSEGWKEMSKKVREAFESRGCFLLKCDEISKELCGQLFTGMKSLFDLPEDTKEKFVSPKLYRGYINKSYAIPNSQSFGIDSDLDHDTTHQDFINLMWPQGNPIF 126
BLAST of Ca_01794 vs. TrEMBL
Match: G7JTE7_MEDTR (1-aminocyclopropane-1-carboxylate oxidase OS=Medicago truncatula GN=MTR_4g021380 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 4.434e-38 Identity = 81/126 (64.29%), Postives = 94/126 (74.60%), Query Frame = 1
Query: 1 MGSENEIPLLDFRTVNGVTLEEGGERWKEMSKKVIEAFESHGCFFLLSDQIPNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTT-EKFTNLMWPQGNPIF 375
M +E+EIP+LDFR +GVTLE+G E WKEMSKKV EAFES GCF L D+I L Q+FT MKSLF+LPE+TK+KF K YRGY S+ IP+ QSFGID L DTT + F NLMWPQGNPIF
Sbjct: 1 MENESEIPILDFRRSSGVTLEKGSEGWKEMSKKVREAFESRGCFLLKCDEISKELCGQLFTGMKSLFDLPEDTKEKFVSPKLYRGYINKSYAIPNSQSFGIDSDLDHDTTHQDFINLMWPQGNPIF 126
BLAST of Ca_01794 vs. TrEMBL
Match: G7JTE6_MEDTR (Gibberellin 2-beta-dioxygenase OS=Medicago truncatula GN=MTR_4g021360 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 2.518e-33 Identity = 75/126 (59.52%), Postives = 86/126 (68.25%), Query Frame = 1
Query: 1 MGSENEIPLLDFRTVNGVTLEEGGERWKEMSKKVIEAFESHGCFFLLSDQIPNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTT-EKFTNLMWPQGNPIF 375
MG E EIP+LDF T + EG WKEM KKV EAFE+HGCF + D+I N RE++FT MKSLF+LPEETK+KF AYRG+T IPH SFGI D LK DT E F NL+WPQGNP F
Sbjct: 1 MGIECEIPILDFPTSGVIEESEG---WKEMCKKVREAFENHGCFIVRGDEILNQSREELFTGMKSLFDLPEETKQKFFSPNAYRGFTNKGDHIPHADSFGIYDTLKADTVDEDFVNLLWPQGNPTF 123
BLAST of Ca_01794 vs. TrEMBL
Match: I1JUH5_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 1.293e-29 Identity = 72/129 (55.81%), Postives = 86/129 (66.67%), Query Frame = 1
Query: 1 MGSENE---IPLLDFRTVNGVTLEEGGERWKEMSKKVIEAFESHGCFFLLSDQI-PNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTTEKFTNLMWPQGNPIF 375
M SE+E IP DF LEEG E WKEMSKKV EA ESHG F L+ D+I P ++RE+MF MK LF+LPEETK++ K YRGY + +IP C+SFG+DDA T E +NLMWPQGNP F
Sbjct: 1 MESESEVTMIPCFDFCKA----LEEGSEEWKEMSKKVREACESHGYFLLMCDEIIPESVREEMFDGMKELFDLPEETKQQHICQKPYRGYIGKNSIIPLCESFGVDDAPFSATAEALSNLMWPQGNPHF 125
BLAST of Ca_01794 vs. TrEMBL
Match: B9IKS3_POPTR (2-oxoglutarate-dependent dioxygenase OS=Populus trichocarpa GN=2OGox9 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 2.881e-29 Identity = 64/125 (51.20%), Postives = 83/125 (66.40%), Query Frame = 1
Query: 1 MGSENEIPLLDFRTVNGVTLEEGGERWKEMSKKVIEAFESHGCFFLLSDQIPNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTTEKFTNLMWPQGNPIF 375
M ++ EIP LD +E E+WKE+ +V EA E+HG FFL+ D+IP +LRE+MF +K+LF+LPEETK K K YR Y N VIP +SFG+DDA D ++ FTNLMWP+GNP F
Sbjct: 1 MAAKVEIPFLDISEEALAGIEVKSEKWKELCNQVREACETHGIFFLVYDKIPTSLREEMFVALKALFDLPEETKNKHVNPKPYRSYLGNCPVIPFHESFGVDDAPTLDASQAFTNLMWPEGNPSF 125
BLAST of Ca_01794 vs. TrEMBL
Match: K7KTL2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 4.914e-29 Identity = 71/129 (55.04%), Postives = 84/129 (65.12%), Query Frame = 1
Query: 1 MGSENEI---PLLDFRTVNGVTLEEGGERWKEMSKKVIEAFESHGCFFLLSDQ-IPNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTTEKFTNLMWPQGNPIF 375
M SE EI P DF G LEEG E WKEMSKKV EA ESHGCF L+ D+ IP +RE+ F++M++LF+LPEE K K K Y Y+ S VIP ++FGIDD + E FTNLMWPQGNP F
Sbjct: 1 MESEREIMMIPCFDF----GKALEEGSEEWKEMSKKVREACESHGCFLLVCDEMIPKGVREEFFSNMEALFDLPEERKMKHISPKPYSSYSGKSPVIPLSETFGIDDVPLSASAEAFTNLMWPQGNPPF 125
BLAST of Ca_01794 vs. TrEMBL
Match: I1K8Z3_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 4.914e-29 Identity = 71/129 (55.04%), Postives = 84/129 (65.12%), Query Frame = 1
Query: 1 MGSENEI---PLLDFRTVNGVTLEEGGERWKEMSKKVIEAFESHGCFFLLSDQ-IPNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTTEKFTNLMWPQGNPIF 375
M SE EI P DF G LEEG E WKEMSKKV EA ESHGCF L+ D+ IP +RE+ F++M++LF+LPEE K K K Y Y+ S VIP ++FGIDD + E FTNLMWPQGNP F
Sbjct: 1 MESEREIMMIPCFDF----GKALEEGSEEWKEMSKKVREACESHGCFLLVCDEMIPKGVREEFFSNMEALFDLPEERKMKHISPKPYSSYSGKSPVIPLSETFGIDDVPLSASAEAFTNLMWPQGNPPF 125
BLAST of Ca_01794 vs. TrEMBL
Match: G7I6C0_MEDTR (2-oxoglutarate-dependent dioxygenase OS=Medicago truncatula GN=MTR_1g011600 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 4.914e-29 Identity = 71/129 (55.04%), Postives = 85/129 (65.89%), Query Frame = 1
Query: 1 MGSENE-IPLLDFRTVN-GVTLEEGGERWKEMSKKVIEAFESHGCFFLLSDQ--IPNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTTEKFTNLMWPQGNPIF 375
MGSENE IP LDF + GV +EG E WK+MSKKV EA ESHGCF ++ D+ IP NL E MF MK LF+LPE+ K+K + + YT++ IP Q+FGIDDA D FTNLMW QGNP F
Sbjct: 1 MGSENEMIPCLDFSKYDLGVVDQEGSEEWKKMSKKVREACESHGCFIIMYDENKIPKNLCENMFIGMKDLFDLPEDIKRKHISSTPFSSYTSDDPKIPLSQTFGIDDASLGDNALAFTNLMWSQGNPTF 129
BLAST of Ca_01794 vs. TrEMBL
Match: M5XJ06_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024900mg PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.867e-28 Identity = 65/124 (52.42%), Postives = 85/124 (68.55%), Query Frame = 1
Query: 7 SENEIPLLDFRTVNGVTLEEGGERWKEMSKKVIEAFESHGCFFLL-SDQIPNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTTEKFTNLMWPQGNPIF 375
++ +P+LDF G+ L++G E WK M+ KV EA E++GCF +L D+IP NLRE+M MK+LF+LPEETK+K K Y+ Y S VIP +SFGID+A + D E FTNLMWPQG P F
Sbjct: 7 ADQVLPILDFS--EGLVLKQGTEEWKAMNNKVREACENYGCFLVLVKDEIPMNLREEMVAAMKALFDLPEETKQKHTSPKPYQSYEGKSPVIPLNESFGIDNACELDVAEAFTNLMWPQGKPSF 128
BLAST of Ca_01794 vs. TrEMBL
Match: I1JUH4_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 2.439e-28 Identity = 71/130 (54.62%), Postives = 82/130 (63.08%), Query Frame = 1
Query: 1 MGSENEI---PLLDFRTVNGVTLEEGGERWKEMSKKVIEAFESHGCFFLLSDQ--IPNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTTEKFTNLMWPQGNPIF 375
M SE+EI P DF G LEEG E WKEMSKKV EA ESHGCF L+ D IP + EQ F++M++LF+LPEETK K K Y Y S VIP ++FGIDD + E FT LMWPQGNP F
Sbjct: 1 MESESEIMMIPCFDF----GKALEEGSEEWKEMSKKVREACESHGCFLLVCDHEIIPKGVHEQFFSNMEALFDLPEETKMKHISPKPYSSYNGKSPVIPLSETFGIDDVPLSASAEAFTYLMWPQGNPSF 126
BLAST of Ca_01794 vs. DB:Swiss
Match: AOP1L_ARATH (Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 OS=Arabidopsis thaliana OX=3702 GN=AOP1.2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.161e-15 Identity = 40/118 (33.90%), Postives = 63/118 (53.39%), Query Frame = 1
Query: 16 EIPLLDFRTVNGVTLEEGGERWKEMSKKVIEAFESHGCFFLLSDQIPNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTTEKFTNLMWP-QGN 366
++P++DF N L+ G +W E+ V++A E +GCF D++ L +F M+ LFELP TK++ +K + GY ++ +S GIDDA + FT +WP GN
Sbjct: 13 QLPVIDFSDQN---LKPGSSKWDEVKADVLKALEDYGCFEAFFDKLSVELNRSVFEAMEDLFELPIPTKQRNVSSKPFHGYLCHNLY----ESLGIDDANVLEKVNDFTQQLWPDHGN 123
BLAST of Ca_01794 vs. DB:Swiss
Match: AOP1V_ARATH (Probable 2-oxoglutarate-dependent dioxygenase AOP1 (Fragment) OS=Arabidopsis thaliana OX=3702 GN=AOP1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.267e-14 Identity = 39/118 (33.05%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 16 EIPLLDFRTVNGVTLEEGGERWKEMSKKVIEAFESHGCFFLLSDQIPNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTTEKFTNLMWP-QGN 366
++P++DF N L+ G +W E++ V++A E +GCF D++ L +F M+ LFELP TK++ +K + GY ++ +S GI+DA + FT +WP GN
Sbjct: 6 QLPVIDFSDQN---LKPGSSKWDEVTADVLKALEDYGCFEASFDKLSVELNRSVFEAMEDLFELPIPTKQRNVSSKLFHGYLCHNLY----ESLGINDANVLEKVNDFTQQLWPDHGN 116
BLAST of Ca_01794 vs. DB:Swiss
Match: AOP1C_ARATH (Probable 2-oxoglutarate-dependent dioxygenase AOP1 OS=Arabidopsis thaliana OX=3702 GN=AOP1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.551e-14 Identity = 39/118 (33.05%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 16 EIPLLDFRTVNGVTLEEGGERWKEMSKKVIEAFESHGCFFLLSDQIPNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTTEKFTNLMWP-QGN 366
++P++DF N L+ G +W E++ V++A E +GCF D++ L +F M+ LFELP TK++ +K + GY ++ +S GI+DA + FT +WP GN
Sbjct: 13 QLPVIDFSDQN---LKPGSSKWDEVTADVLKALEDYGCFEASFDKLSVELNRSVFEAMEDLFELPIPTKQRNVSSKPFHGYLCHNLY----ESLGINDANVLEKVNDFTQQLWPDHGN 123
BLAST of Ca_01794 vs. DB:Swiss
Match: AOP3C_ARATH (2-oxoglutarate-dependent dioxygenase AOP3 OS=Arabidopsis thaliana OX=3702 GN=AOP3 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 9.666e-14 Identity = 37/115 (32.17%), Postives = 61/115 (53.04%), Query Frame = 1
Query: 22 PLLDFRTVNGVTLEEGGERWKEMSKKVIEAFESHGCFFLLSDQIPNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTTEKFTNLMWPQGN 366
P L ++ TL+ G +W ++ V +A E +GCF DQ+ L+ + M+ LF LP E K++ K + GY +++ + +SFGI DA + +FT +WP+GN
Sbjct: 6 PQLPLICLSDQTLKPGSSKWVKVRSDVRKALEDYGCFEAKIDQVSMELQGSVLKAMQELFALPTEAKQRNVCPKPFTGYLSHNGL---SESFGIKDANILEKAHEFTQQLWPEGN 117
BLAST of Ca_01794 vs. DB:Swiss
Match: AOP3L_ARATH (2-oxoglutarate-dependent dioxygenase AOP3 OS=Arabidopsis thaliana OX=3702 GN=AOP3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.573e-13 Identity = 37/115 (32.17%), Postives = 61/115 (53.04%), Query Frame = 1
Query: 22 PLLDFRTVNGVTLEEGGERWKEMSKKVIEAFESHGCFFLLSDQIPNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTTEKFTNLMWPQGN 366
P L ++ TL+ G +W ++ V +A E +GCF DQ+ L+ + M+ LF LP E K++ K + GY +++ + +SFGI DA + +FT +WP+GN
Sbjct: 6 PQLPLICLSDQTLKPGSSKWVKVRSDVRKALEDYGCFEAKIDQVSMELQGSVLKAMQELFALPTEAKQRNVCPKPFAGYFSHNGL---SESFGIKDANILEKAHEFTQQLWPEGN 117
BLAST of Ca_01794 vs. DB:Swiss
Match: AOP3V_ARATH (2-oxoglutarate-dependent dioxygenase AOP3 OS=Arabidopsis thaliana OX=3702 GN=AOP3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.636e-13 Identity = 37/115 (32.17%), Postives = 61/115 (53.04%), Query Frame = 1
Query: 22 PLLDFRTVNGVTLEEGGERWKEMSKKVIEAFESHGCFFLLSDQIPNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTTEKFTNLMWPQGN 366
P L ++ TL+ G +W ++ V +A E +GCF DQ+ L+ + M+ LF LP E K++ K + GY +++ + +SFGI DA + +FT +WP+GN
Sbjct: 6 PQLPLICLSDQTLKPGSSKWVKVRSDVRKALEDYGCFEAKIDQVSMELQGSVLKAMQELFALPTEAKQRNVCPKPFAGYFSHNGL---SESFGIKDANILEKAHEFTQQLWPEGN 117
BLAST of Ca_01794 vs. DB:Swiss
Match: AOP2C_ARATH (Probable inactive 2-oxoglutarate-dependent dioxygenase AOP2 OS=Arabidopsis thaliana OX=3702 GN=AOP2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.219e-13 Identity = 41/123 (33.33%), Postives = 66/123 (53.66%), Query Frame = 1
Query: 1 MGSEN-EIPLLDFRTVNGVTLEEGGERWKEMSKKVIEAFESHGCFFLLSDQIPNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTTEKFTNLMWPQGN 366
MGS + ++PL++ TLE G +W E+ V +A E GCF D++ L+E + M+ LF LP ETK++ K Y GY ++++ +S GI +A + +FT +WP G+
Sbjct: 1 MGSCSLQLPLINLA---DKTLEPGSSKWAEVRSDVRKALEDFGCFEASYDKVSLELQESIMKTMEELFALPVETKQRNVCPKPYVGYLNHNNL---SESLGISNANILENINEFTQQLWPHGD 117
BLAST of Ca_01794 vs. DB:Swiss
Match: AOP2V_ARATH (2-oxoglutarate-dependent dioxygenase AOP2 OS=Arabidopsis thaliana OX=3702 GN=AOP2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.411e-13 Identity = 41/123 (33.33%), Postives = 66/123 (53.66%), Query Frame = 1
Query: 1 MGSEN-EIPLLDFRTVNGVTLEEGGERWKEMSKKVIEAFESHGCFFLLSDQIPNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTTEKFTNLMWPQGN 366
MGS + ++PL++ TLE G +W E+ V +A E GCF D++ L+E + M+ LF LP ETK++ K Y GY ++++ +S GI +A + +FT +WP G+
Sbjct: 1 MGSCSLQLPLINLA---DKTLEPGSSKWAEVRSDVRKALEDFGCFEASYDKVSLELQESIMKTMEELFALPVETKQRNVCPKPYVGYLNHNNL---SESLGISNANILENVNEFTQQLWPDGD 117
BLAST of Ca_01794 vs. DB:Swiss
Match: AOP2L_ARATH (2-oxoglutarate-dependent dioxygenase AOP2 OS=Arabidopsis thaliana OX=3702 GN=AOP2 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.379e-13 Identity = 40/123 (32.52%), Postives = 66/123 (53.66%), Query Frame = 1
Query: 1 MGSEN-EIPLLDFRTVNGVTLEEGGERWKEMSKKVIEAFESHGCFFLLSDQIPNNLREQMFTDMKSLFELPEETKKKFAGAKAYRGYTANSHVIPHCQSFGIDDALKPDTTEKFTNLMWPQGN 366
MGS + ++PL++ TLE G +W E+ V +A + GCF D++ L+E + M+ LF LP ETK++ K Y GY ++++ +S GI +A + +FT +WP G+
Sbjct: 1 MGSCSLQLPLINLA---DKTLEPGSSKWAEVRSDVRKALQDFGCFEASYDKVSLELQESIMKTMEELFALPVETKQRNVCPKPYVGYLNHNNL---SESLGISNANILENINEFTQQLWPHGD 117 The following BLAST results are available for this feature:
BLAST of Ca_01794 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_01794 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 9
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_01794_v1.0_kabuli ID=Ca_01794_v1.0_kabuli; Name=Ca_01794; organism=Cicer arietinum; type=mRNA; length=381bpback to top protein sequence of Ca_01794_v1.0_kabuli >Ca_01794_v1.0_kabuli ID=Ca_01794_v1.0_kabuli; Name=Ca_01794_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=126bpback to top mRNA from alignment at Ca5:34494766..34495146- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_01794_v1.0_kabuli ID=Ca_01794_v1.0_kabuli; Name=Ca_01794; organism=Cicer arietinum; type=mRNA; length=381bp; location=Sequence derived from: Ca5:34494766..34495146- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:34494766..34495146- >Ca_01794_v1.0_kabuli ID=Ca_01794_v1.0_kabuli; Name=Ca_01794; organism=Cicer arietinum; type=CDS; length=381bp; location=Sequence derived from: Ca5:34494766..34495146- (Cicer arietinumback to top |