Ca_04798, Ca_04798_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_04798
Unique NameCa_04798_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length648
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:31000917..31001564 -Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR381Pisum sativum Cameor genome v1aPisum sativum
capsR384Pisum sativum Cameor genome v1aPisum sativum
cavuR444Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR446Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR454Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR523Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0708Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0392Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0763Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0956Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cazwsR330Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR353Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR364Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR401Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR368Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR403Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR419Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR472Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR408Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR438Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR357Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR413Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR214Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacarR393Cicer arietinum
cacarR427Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat05G0024800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-KK1_019514Cajanus cajan Asha genome v1.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004501056.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_04798-CDS1Ca_04798-CDS1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_04798_v1.0_kabuliCa_04798_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_04798 vs. SwissProt
Match: ESCA_ARATH (Putative DNA-binding protein ESCAROLA OS=Arabidopsis thaliana GN=ESC PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.835e-20
Identity = 53/143 (37.06%), Postives = 84/143 (58.74%), Query Frame = 1 
Query:   73 NKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQ-----------SNGTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADA 468
            +K+KA   +IV  +SP AL S V+E++ G+D++E++  YA+R  +G+ +L G+G VS+VTLRQ             G ++ L G F+I+S++GT+LPP  P    GLS++                  AS P++LMAA F++A
Sbjct:   95 SKNKAKPPIIVTRDSPNALRSHVLEVSPGADIVESVSTYARRRGRGVSVLGGNGTVSNVTLRQPVTPGNGGGVSGGGGVVTLHGRFEILSLTGTVLPPPAPPGAGGLSIFLAGGQGQVVGGSVVAPLIASAPVILMAASFSNA 237
[Close]
BLAST of Ca_04798 vs. TrEMBL
Match: F6I6W2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g00590 PE=4 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.619e-22
Identity = 59/135 (43.70%), Postives = 87/135 (64.44%), Query Frame = 1 
Query:   73 NKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQ---SNGTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADA 468
            +K+K    +IV  +SP AL S V+E+AAG+DV+E++ NYA+R  +G+C+L+G G V +VTLRQ     G+I+ L G F+I+S+SGT+LPP  P +  GLS++                  AS P++LMAA FA+A
Sbjct:  146 SKNKPKPPIIVTRDSPNALRSHVLEVAAGADVMESVLNYARRRGRGVCVLSGGGTVMNVTLRQPASPAGSIVTLHGRFEILSLSGTVLPPPAPPSAGGLSIFLSGGQGQVVGGSVVGPLMASGPVVLMAASFANA 280
[Close]
BLAST of Ca_04798 vs. TrEMBL
Match: F6I0P7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g04110 PE=4 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 5.835e-22
Identity = 58/135 (42.96%), Postives = 87/135 (64.44%), Query Frame = 1 
Query:   73 NKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQ---SNGTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADA 468
            +K+KA   +I+  +SP AL S V+EI+AG+D++E++ NYA+R  +G+CIL+G G V+ VTLRQ    +G+++ L G F+I+S++GT LPP  P    GL++Y                  AS P+LLMAA FA+A
Sbjct:   72 SKNKAKPPIIITRDSPNALRSHVLEISAGADIVESVSNYARRRGRGVCILSGGGAVTDVTLRQPAAPSGSVVTLHGRFEILSLTGTALPPPAPPGAGGLTIYLGGGQGQVVGGRVVGPLVASGPVLLMAASFANA 206
[Close]
BLAST of Ca_04798 vs. TrEMBL
Match: M5WFE6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020689mg PE=4 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.300e-21
Identity = 54/132 (40.91%), Postives = 85/132 (64.39%), Query Frame = 1 
Query:   73 NKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQSNGTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADA 468
            +K+K    +IV  ++P AL S V+EI+AG+D++E++  YA+R  +G+C+L+G G V++VTLRQ  G+++ L G F+I+S+SGT+LPP  P    GLS++                  AS P++LMAA F +A
Sbjct:  100 SKNKPKPPIIVTRDTPNALRSHVLEISAGADIMESVSIYARRRGRGVCVLSGSGTVANVTLRQPAGSVVTLHGRFEILSLSGTVLPPPAPPGAGGLSIFLAGVQGQVVGGCVVGPLLASGPVVLMAASFGNA 231
[Close]
BLAST of Ca_04798 vs. TrEMBL
Match: K4BW08_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc04g082810.2 PE=4 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 6.452e-21
Identity = 53/132 (40.15%), Postives = 84/132 (63.64%), Query Frame = 1 
Query:   73 NKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQSNGTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADA 468
            +K+K    +IV  ++P AL S V+E++   D++E+I NYA+R  +G+CIL+G G V++V LRQ   +++ L G F+I+S+SGT+LPP  P A +G+S++                  AS P++LMAA FA+A
Sbjct:   39 SKNKPKPPIIVTRDTPNALRSHVLEVSTDVDIMESISNYARRRGRGVCILSGSGTVTNVNLRQPAASVVTLHGRFEILSLSGTVLPPPAPPASSGISIFLSGGQGQVVGGSVVGPLIASGPVVLMAASFANA 170
[Close]
BLAST of Ca_04798 vs. TrEMBL
Match: B9GPN1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_410773 PE=4 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.437e-20
Identity = 54/135 (40.00%), Postives = 86/135 (63.70%), Query Frame = 1 
Query:   73 NKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQ---SNGTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADA 468
            +K+K    +IV  +SP AL S V+E+++G+D++E++ NYA++   G+C+L+G G V++VTLRQ     G++L L G F+I+S+SGT+LPP  P    GLS++                  A+ P++LMAA FA+A
Sbjct:   11 SKNKPKPPIIVTRDSPNALRSHVLEVSSGADIVESVSNYARKRGIGVCVLSGSGSVANVTLRQPASPAGSVLTLHGRFEILSLSGTVLPPPAPPGAGGLSIFLSGGQGQVVGGNVVGLLMAAGPVVLMAASFANA 145
[Close]
BLAST of Ca_04798 vs. TrEMBL
Match: B9R8U1_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1602220 PE=4 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.452e-20
Identity = 54/135 (40.00%), Postives = 86/135 (63.70%), Query Frame = 1 
Query:   73 NKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQ---SNGTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADA 468
            +K+K    +IV  +SP AL S V+E++ GSD++E++  YA++  +G+C+L+G+G V++VTLRQ     G+++ L G F+I+S+SGT+LPP  P    GLS++                  AS P++LMAA FA+A
Sbjct:   80 SKNKPKPPIIVTRDSPNALRSHVLEVSTGSDIMESVSIYARKRGRGVCVLSGNGTVANVTLRQPASPAGSVVTLHGRFEILSLSGTVLPPPAPPGAGGLSIFLSGGQGQVVGGSVVGPLMASGPVVLMAASFANA 214
[Close]
BLAST of Ca_04798 vs. TrEMBL
Match: K7KSH6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.202e-20
Identity = 53/132 (40.15%), Postives = 84/132 (63.64%), Query Frame = 1 
Query:   73 NKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQSNGTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADA 468
            +K+K    +IV  +SP  L S V+E+++G+DV+E++ NYA+R  +G+ +L+G G V++V LRQ  G++L L G F+I+S++GT+LPP  P    GLSVY                  AS+ ++L+AA FA+A
Sbjct:   34 SKNKPKPPVIVTRDSPNVLRSHVLEVSSGADVVESLSNYARRRGRGVSVLSGSGTVANVVLRQPAGSVLTLHGRFEIVSMTGTVLPPPAPPGSDGLSVYLSGAQGQVVGGVVVAPLVASSHVVLVAASFANA 165
[Close]
BLAST of Ca_04798 vs. TrEMBL
Match: B9H5W8_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_206860 PE=4 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.202e-20
Identity = 55/135 (40.74%), Postives = 85/135 (62.96%), Query Frame = 1 
Query:   73 NKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQ---SNGTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADA 468
            +K+K    +IV  +SP AL S VIEI+ G+D++E++  YA++  +G+C+L+G G V++VTLRQ     G++L L G F+I+S+SGT+LPP  P    GLS++                  A+ P++LMAA FA+A
Sbjct:   10 SKNKPKPPIIVTRDSPNALRSHVIEISNGADIVESVSTYARKRGRGVCVLSGSGTVANVTLRQPASPAGSVLTLHGRFEILSLSGTVLPPPAPPGAGGLSIFLSGGQGQVVGGNVVGPLMAAGPVVLMAASFANA 144
[Close]
BLAST of Ca_04798 vs. TrEMBL
Match: B9RDE5_RICCO (ESC, putative OS=Ricinus communis GN=RCOM_1612340 PE=4 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.217e-19
Identity = 54/134 (40.30%), Postives = 84/134 (62.69%), Query Frame = 1 
Query:   73 NKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQ--SNGTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADA 468
            +K+K    +I+  +S  AL S V+EIA GSD++E++  +A+R  +G+CIL+G G V++VTLRQ  S G ++ L G F+I+S+SG+ LPP  P A +GL++Y                  AS P+++MAA F +A
Sbjct:   92 SKNKPKPPIIITRDSANALRSHVMEIANGSDIMESVSTFARRRQRGVCILSGTGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGPLLASGPVVIMAASFGNA 225
[Close]
BLAST of Ca_04798 vs. TrEMBL
Match: M5VNG8_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa018299mg PE=4 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.589e-19
Identity = 53/142 (37.32%), Postives = 82/142 (57.75%), Query Frame = 1 
Query:   73 NKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQ----------SNGTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADA 468
            +K+K    +I+  ++P  L S V+E+++GSD+++++  YA R  +G+C+L+G G V++VTLRQ           NGT++ LQG F+I+SI+GT LPP  P    GLS+Y                  AS P++LM   FA A
Sbjct:   34 SKNKPKPPLIITQDAPNGLTSHVLEVSSGSDIVDSLVTYASRRGRGVCVLSGSGAVTNVTLRQPATTVLLSPSDNGTVVTLQGRFEILSITGTCLPPPAPPGAGGLSIYLTGGQGQVAGGIVVGPLRASGPVVLMVVSFAHA 175
[Close]
BLAST of Ca_04798 vs. DB:Swiss
Match: AHL16_ARATH (AT-hook motif nuclear-localized protein 16 OS=Arabidopsis thaliana OX=3702 GN=AHL16 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.600e-24
Identity = 64/135 (47.41%), Postives = 97/135 (71.85%), Query Frame = 1 
Query:   70 KNKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQ--SNGTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADA 468
            KNK K    +IV ++SP +L +  +EI++G D+ ET+ ++A+R  +G+CIL+ +G V++VTLRQ  S+G I+ L G ++I+S+ G+ILPP  P   TGL++YL+   GQVVGG VV  L+AS P++LMAA F +A
Sbjct:   63 KNKPKP--PIIVTHDSPNSLRANAVEISSGCDICETLSDFARRKQRGLCILSANGCVTNVTLRQPASSGAIVTLHGRYEILSLLGSILPPPAPLGITGLTIYLAGPQGQVVGGGVVGGLIASGPVVLMAASFMNA 195
[Close]
BLAST of Ca_04798 vs. DB:Swiss
Match: AHL19_ARATH (AT-hook motif nuclear-localized protein 19 OS=Arabidopsis thaliana OX=3702 GN=AHL19 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.033e-21
Identity = 68/143 (47.55%), Postives = 99/143 (69.23%), Query Frame = 1 
Query:   70 KNKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQSN----------GTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADA 468
            KNK K    + V  +SP AL S V+EIA+G+DV+ET+  +A+R  +GICIL+G+G V++VTLRQ +            +L LQG F+I+S++G+ LP   P   TGL++YL+   GQVVGGSVV PL+A+ P++L+AA F++A
Sbjct:   90 KNKPKP--PIFVTRDSPNALKSHVMEIASGTDVIETLATFARRRQRGICILSGNGTVANVTLRQPSTAAVAAAPGGAAVLALQGRFEILSLTGSFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGPLMAAGPVMLIAATFSNA 230
[Close]
BLAST of Ca_04798 vs. DB:Swiss
Match: AHL21_ARATH (AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AHL21 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.602e-21
Identity = 59/134 (44.03%), Postives = 92/134 (68.66%), Query Frame = 1 
Query:   70 KNKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQ--SNGTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFAD 465
            KNK K    +IV  ES   L + ++E+ +G DV E I  YA+R  +GIC+L+G G V++V++RQ  + G ++ L+GTF+I+S+SG+ LPP  P   T L+++L+   GQVVGG+VV  L+A+ P+++MAA F +
Sbjct:   88 KNKPKP--PVIVTRESANTLRAHILEVGSGCDVFECISTYARRRQRGICVLSGTGTVTNVSIRQPTAAGAVVTLRGTFEILSLSGSFLPPPAPPGATSLTIFLAGAQGQVVGGNVVGELMAAGPVMVMAASFTN 219
[Close]
BLAST of Ca_04798 vs. DB:Swiss
Match: AHL20_ARATH (AT-hook motif nuclear-localized protein 20 OS=Arabidopsis thaliana OX=3702 GN=AHL20 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.653e-21
Identity = 66/135 (48.89%), Postives = 96/135 (71.11%), Query Frame = 1 
Query:   70 KNKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQSN--GTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADA 468
            KNK KA   + V  +SP AL S V+EI+ GSDV +TI ++++R  +G+C+L+G G V++VTLRQ+   G ++ LQG F+I+S++G  LP   P   TGL+VYL+   GQVVGGSVV PLLA   ++++AA F++A
Sbjct:   77 KNKPKA--PIFVTRDSPNALRSHVLEISDGSDVADTIAHFSRRRQRGVCVLSGTGSVANVTLRQAAAPGGVVSLQGRFEILSLTGAFLPGPSPPGSTGLTVYLAGVQGQVVGGSVVGPLLAIGSVMVIAATFSNA 209
[Close]
BLAST of Ca_04798 vs. DB:Swiss
Match: AHL18_ARATH (AT-hook motif nuclear-localized protein 18 OS=Arabidopsis thaliana OX=3702 GN=AHL18 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.246e-20
Identity = 63/133 (47.37%), Postives = 92/133 (69.17%), Query Frame = 1 
Query:   70 KNKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQSNGTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADA 468
            KNK KA   +IV  +S  A    V+EI    DV+E++  +A+R  +G+C+L G+G V++VT+RQ  G ++ L G F+I+S+SG+ LPP  P A +GL VYL+   GQV+GGSVV PL AS+P+++MAA F +A
Sbjct:   69 KNKPKA--PIIVTRDSANAFRCHVMEITNACDVMESLAVFARRRQRGVCVLTGNGAVTNVTVRQPGGGVVSLHGRFEILSLSGSFLPPPAPPAASGLKVYLAGGQGQVIGGSVVGPLTASSPVVVMAASFGNA 199
[Close]
BLAST of Ca_04798 vs. DB:Swiss
Match: AHL23_ARATH (AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AHL23 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 9.980e-20
Identity = 57/134 (42.54%), Postives = 90/134 (67.16%), Query Frame = 1 
Query:   70 KNKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQ--SNGTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFAD 465
            KNK K    +I+  ES   L + ++E+  G DV + +  YA+R  +GIC+L+G G V++V++RQ  + G ++ LQGTF+I+S+SG+ LPP  P   T L+++L+   GQVVGGSVV  L A+ P++++AA F +
Sbjct:   92 KNKPKP--PVIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGICVLSGSGTVTNVSIRQPSAAGAVVTLQGTFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTN 223
[Close]
BLAST of Ca_04798 vs. DB:Swiss
Match: AHL15_ARATH (AT-hook motif nuclear-localized protein 15 OS=Arabidopsis thaliana OX=3702 GN=AHL15 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.916e-19
Identity = 62/136 (45.59%), Postives = 95/136 (69.85%), Query Frame = 1 
Query:   70 KNKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQ--SNGTILPLQGTFQIISISGTILPPS-MPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADA 468
            KNK K+ +  +V  ESP +L S V+EIA G+DV E++  +A+R  +G+ +L+G G V++VTLRQ  ++G ++ L+G F+I+S+ G  LP S  P A  GL++YL+   GQVVGG V  PL+AS P++++AA F +A
Sbjct:   98 KNKPKSPV--VVTKESPNSLQSHVLEIATGADVAESLNAFARRRGRGVSVLSGSGLVTNVTLRQPAASGGVVSLRGQFEILSMCGAFLPTSGSPAAAAGLTIYLAGAQGQVVGGGVAGPLIASGPVIVIAATFCNA 231
[Close]
BLAST of Ca_04798 vs. DB:Swiss
Match: AHL22_ARATH (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.777e-18
Identity = 64/139 (46.04%), Postives = 97/139 (69.78%), Query Frame = 1 
Query:   70 KNKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQ------SNGTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADA 468
            KNK K    +I+  +S  AL S V+E+A G DV+E++  +A+R  +GIC+L+G+G V++VT+RQ         +++ L G F+I+S+SG+ LPP  P A +GL++YL+   GQVVGGSVV PL+AS P+++MAA F +A
Sbjct:   99 KNKPKP--PIIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRGICVLSGNGAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGPLMASGPVVIMAASFGNA 235
[Close]
BLAST of Ca_04798 vs. DB:Swiss
Match: AHL29_ARATH (AT-hook motif nuclear-localized protein 29 OS=Arabidopsis thaliana OX=3702 GN=AHL29 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.217e-18
Identity = 63/148 (42.57%), Postives = 99/148 (66.89%), Query Frame = 1 
Query:   70 KNKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQ-----------SNGTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADAELVK 480
            KNK K    +IV  +SP  L S V+E+++G+D++E++  YA+R  +G+ IL+G+G V++V+LRQ             G ++ L G F+I+S++GT+LPP  P    GLS++LS   GQV+GG+VV PL+AS P++LMAA F++A   +
Sbjct:   82 KNKPKP--PVIVTRDSPNVLRSHVLEVSSGADIVESVTTYARRRGRGVSILSGNGTVANVSLRQPATTAAHGANGGTGGVVALHGRFEILSLTGTVLPPPAPPGSGGLSIFLSGVQGQVIGGNVVAPLVASGPVILMAASFSNATFER 227
[Close]
BLAST of Ca_04798 vs. DB:Swiss
Match: AHL26_ARATH (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AHL26 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.136e-18
Identity = 64/136 (47.06%), Postives = 96/136 (70.59%), Query Frame = 1 
Query:   70 KNKSKAGMNMIVKYESPYALHSRVIEIAAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQSN---GTILPLQGTFQIISISGTILPPSMPQAPTGLSVYXXXXXXXXXXXXXXXXXXASTPLLLMAACFADA 468
            KNK KA   +I+  +S  AL + V+EI  G D+++ +  +A+R  +G+C+++G G V++VT+RQ     G+++ L G F+I+S+SG+ LPP  P A TGLSVYL+   GQVVGGSVV PLL S P+++MAA F++A
Sbjct:  128 KNKPKA--PIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVMSGTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGGQGQVVGGSVVGPLLCSGPVVVMAASFSNA 261
The following BLAST results are available for this feature:
BLAST of Ca_04798 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
ESCA_ARATH1.835e-2037.06Putative DNA-binding protein ESCAROLA OS=Arabidops... [more]
back to top
BLAST of Ca_04798 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
F6I6W2_VITVI2.619e-2243.70Putative uncharacterized protein OS=Vitis vinifera... [more]
F6I0P7_VITVI5.835e-2242.96Putative uncharacterized protein OS=Vitis vinifera... [more]
M5WFE6_PRUPE1.300e-2140.91Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
K4BW08_SOLLC6.452e-2140.15Uncharacterized protein OS=Solanum lycopersicum GN... [more]
B9GPN1_POPTR1.437e-2040.00Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9R8U1_RICCO2.452e-2040.00DNA binding protein, putative OS=Ricinus communis ... [more]
K7KSH6_SOYBN3.202e-2040.15Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
B9H5W8_POPTR3.202e-2040.74Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9RDE5_RICCO1.217e-1940.30ESC, putative OS=Ricinus communis GN=RCOM_1612340 ... [more]
M5VNG8_PRUPE1.589e-1937.32Uncharacterized protein (Fragment) OS=Prunus persi... [more]

Pages

back to top
BLAST of Ca_04798 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
AHL16_ARATH8.600e-2447.41AT-hook motif nuclear-localized protein 16 OS=Arab... [more]
AHL19_ARATH1.033e-2147.55AT-hook motif nuclear-localized protein 19 OS=Arab... [more]
AHL21_ARATH2.602e-2144.03AT-hook motif nuclear-localized protein 21 OS=Arab... [more]
AHL20_ARATH3.653e-2148.89AT-hook motif nuclear-localized protein 20 OS=Arab... [more]
AHL18_ARATH7.246e-2047.37AT-hook motif nuclear-localized protein 18 OS=Arab... [more]
AHL23_ARATH9.980e-2042.54AT-hook motif nuclear-localized protein 23 OS=Arab... [more]
AHL15_ARATH5.916e-1945.59AT-hook motif nuclear-localized protein 15 OS=Arab... [more]
AHL22_ARATH5.777e-1846.04AT-hook motif nuclear-localized protein 22 OS=Arab... [more]
AHL29_ARATH7.217e-1842.57AT-hook motif nuclear-localized protein 29 OS=Arab... [more]
AHL26_ARATH8.136e-1847.06AT-hook motif nuclear-localized protein 26 OS=Arab... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005175Domain of unknown function DUF296PFAMPF03479DUF296coord: 45..154
score: 4.9
IPR014476Predicted AT-hook DNA-bindingPIRPIRSF016021Predicted AT-hook DNA-binding proteincoord: 1..211
score: 3.8
NoneNo IPR availableGENE3D3.30.1330.80no descriptioncoord: 46..160
score: 1
NoneNo IPR availableSEGsegsegcoord: 8..23
score: NAcoord: 124..141
score: NAcoord: 161..178
score: NAcoord: 190..213
score
NoneNo IPR availableSUPERFAMILY117856AF0104/ALDC/Ptd012-likecoord: 38..176
score: 1.8
NoneNo IPR availableSEGsegsegcoord: 43..65
score: NAcoord: 74..88
score
NoneNo IPR availableSEGsegsegcoord: 42..65
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_04798_v1.0_kabuli ID=Ca_04798_v1.0_kabuli; Name=Ca_04798; organism=Cicer arietinum; type=mRNA; length=648bp
ATGAGTGAGAGAAAAGAGAACTCATCCTCTGTCGTGAGTCGGCGACCTCG
AGGGCGTCCACTTGGGTCTAAGAACAAGTCTAAGGCAGGTATGAATATGA
TAGTGAAATATGAAAGCCCTTATGCACTTCATTCTCGTGTTATCGAGATC
GCTGCTGGATCAGATGTTTTAGAGACTATCTTCAACTATGCTCAACGTCC
ACCTCAAGGCATCTGCATCCTTGCTGGTGATGGTAAGGTGTCTCATGTTA
CTCTTCGTCAATCTAATGGGACTATTTTACCCCTCCAGGGTACCTTCCAG
ATTATTTCCATATCTGGTACTATTCTTCCTCCTTCTATGCCACAGGCTCC
TACAGGTTTGTCTGTTTACTTGTCAAGCACCACAGGACAAGTTGTTGGGG
GTAGTGTTGTTCCTCCTCTTCTCGCTTCAACTCCTCTGCTTTTGATGGCA
GCTTGTTTTGCAGATGCTGAACTTGTTAAGTTACCTTTCCTGCCATCTCA
TCACCACCCTCCCTCAGCTTCTGCTCATTTGCTCGATGTTATTCCAATCA
GGAACACCGATCTCAACTCTCCTTCATCCCCTATCCAACCTGCAACTGCT
ACTGCAACTGCAACTGCTGATTCACCACCCAAACCTCCTCGCATTTAG
back to top

protein sequence of Ca_04798_v1.0_kabuli

>Ca_04798_v1.0_kabuli ID=Ca_04798_v1.0_kabuli; Name=Ca_04798_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=215bp
MSERKENSSSVVSRRPRGRPLGSKNKSKAGMNMIVKYESPYALHSRVIEI
AAGSDVLETIFNYAQRPPQGICILAGDGKVSHVTLRQSNGTILPLQGTFQ
IISISGTILPPSMPQAPTGLSVYLSSTTGQVVGGSVVPPLLASTPLLLMA
ACFADAELVKLPFLPSHHHPPSASAHLLDVIPIRNTDLNSPSSPIQPATA
TATATADSPPKPPRI
back to top

mRNA from alignment at Ca5:31000917..31001564-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_04798_v1.0_kabuli ID=Ca_04798_v1.0_kabuli; Name=Ca_04798; organism=Cicer arietinum; type=mRNA; length=648bp; location=Sequence derived from: Ca5:31000917..31001564- (Cicer arietinum
ATGAGTGAGAGAAAAGAGAACTCATCCTCTGTCGTGAGTCGGCGACCTCG
AGGGCGTCCACTTGGGTCTAAGAACAAGTCTAAGGCAGGTATGAATATGA
TAGTGAAATATGAAAGCCCTTATGCACTTCATTCTCGTGTTATCGAGATC
GCTGCTGGATCAGATGTTTTAGAGACTATCTTCAACTATGCTCAACGTCC
ACCTCAAGGCATCTGCATCCTTGCTGGTGATGGTAAGGTGTCTCATGTTA
CTCTTCGTCAATCTAATGGGACTATTTTACCCCTCCAGGGTACCTTCCAG
ATTATTTCCATATCTGGTACTATTCTTCCTCCTTCTATGCCACAGGCTCC
TACAGGTTTGTCTGTTTACTTGTCAAGCACCACAGGACAAGTTGTTGGGG
GTAGTGTTGTTCCTCCTCTTCTCGCTTCAACTCCTCTGCTTTTGATGGCA
GCTTGTTTTGCAGATGCTGAACTTGTTAAGTTACCTTTCCTGCCATCTCA
TCACCACCCTCCCTCAGCTTCTGCTCATTTGCTCGATGTTATTCCAATCA
GGAACACCGATCTCAACTCTCCTTCATCCCCTATCCAACCTGCAACTGCT
ACTGCAACTGCAACTGCTGATTCACCACCCAAACCTCCTCGCATTTAG
back to top

Coding sequence (CDS) from alignment at Ca5:31000917..31001564-

>Ca_04798_v1.0_kabuli ID=Ca_04798_v1.0_kabuli; Name=Ca_04798; organism=Cicer arietinum; type=CDS; length=648bp; location=Sequence derived from: Ca5:31000917..31001564- (Cicer arietinum
ATGAGTGAGAGAAAAGAGAACTCATCCTCTGTCGTGAGTCGGCGACCTCG
AGGGCGTCCACTTGGGTCTAAGAACAAGTCTAAGGCAGGTATGAATATGA
TAGTGAAATATGAAAGCCCTTATGCACTTCATTCTCGTGTTATCGAGATC
GCTGCTGGATCAGATGTTTTAGAGACTATCTTCAACTATGCTCAACGTCC
ACCTCAAGGCATCTGCATCCTTGCTGGTGATGGTAAGGTGTCTCATGTTA
CTCTTCGTCAATCTAATGGGACTATTTTACCCCTCCAGGGTACCTTCCAG
ATTATTTCCATATCTGGTACTATTCTTCCTCCTTCTATGCCACAGGCTCC
TACAGGTTTGTCTGTTTACTTGTCAAGCACCACAGGACAAGTTGTTGGGG
GTAGTGTTGTTCCTCCTCTTCTCGCTTCAACTCCTCTGCTTTTGATGGCA
GCTTGTTTTGCAGATGCTGAACTTGTTAAGTTACCTTTCCTGCCATCTCA
TCACCACCCTCCCTCAGCTTCTGCTCATTTGCTCGATGTTATTCCAATCA
GGAACACCGATCTCAACTCTCCTTCATCCCCTATCCAACCTGCAACTGCT
ACTGCAACTGCAACTGCTGATTCACCACCCAAACCTCCTCGCATTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR005175PPC_dom
IPR014476AHL15-29