Ca_09021, Ca_09021_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_09021 vs. SwissProt
Match: AT7L3_DANRE (Ataxin-7-like protein 3 OS=Danio rerio GN=atxn7l3 PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.427e-8 Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 1 Query: 235 VDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQN 405 VDIFGQ + N+ C NCSRSI A +FAPHLEKC+G GR + R + + N Sbjct: 69 VDIFGQVYNQWKNKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRIASSNN 125
BLAST of Ca_09021 vs. SwissProt
Match: AT7L3_MOUSE (Ataxin-7-like protein 3 OS=Mus musculus GN=Atxn7l3 PE=2 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 7.082e-8 Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = 1 Query: 235 VDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRN 411 +DIFGQ ++ C NCSRSI A +FAPHLEKC+G GR + R + + N N Sbjct: 69 LDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRIANSNNMN 127
BLAST of Ca_09021 vs. SwissProt
Match: AT7L3_HUMAN (Ataxin-7-like protein 3 OS=Homo sapiens GN=ATXN7L3 PE=1 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 7.082e-8 Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = 1 Query: 235 VDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRN 411 +DIFGQ ++ C NCSRSI A +FAPHLEKC+G GR + R + + N N Sbjct: 69 LDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRIANSNNMN 127
BLAST of Ca_09021 vs. TrEMBL
Match: I1LLP0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 3.239e-49 Identity = 107/177 (60.45%), Postives = 114/177 (64.41%), Query Frame = 1 Query: 1 MSVPNEENXXXXXXXXXXXXXXXXXXIIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRNSRG---XXXXXXXXXXXXXXXXXRLTNGNPSFAGEEHSNG 522 MSVPNEEN IIVDVASECHR+A+ SAQARVR+ADP NSNE NGKYVVDIFGQTHP VANEIF+CMNC RSIMAG+FAPHLEKCMGKGRKARLKVTRSS+ AQNR SRG RL NG +FAGEEHSNG Sbjct: 1 MSVPNEENLSSHSQLSSHFFLDLLDSIIVDVASECHRVARLGLDSNLEEEDEELKLSAQARVRVADPSNSNEANGKYVVDIFGQTHPPVANEIFDCMNCGRSIMAGRFAPHLEKCMGKGRKARLKVTRSSTAAQNRYSRGSPSPGSTYSPYSNYSTNSMNRLANGTSTFAGEEHSNG 177
BLAST of Ca_09021 vs. TrEMBL
Match: C6T5J2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 9.425e-49 Identity = 106/177 (59.89%), Postives = 114/177 (64.41%), Query Frame = 1 Query: 1 MSVPNEENXXXXXXXXXXXXXXXXXXIIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRNSRG---XXXXXXXXXXXXXXXXXRLTNGNPSFAGEEHSNG 522 MSVPNEEN IIVDVASECHR+A+ SAQARVR+ADP NSNE NGKYVVDIFGQTHP VANEIF+CMNC RSIMAG+FAPHLEKCMGKGRKARLKVTRSS+ AQNR SRG +L NG +FAGEEHSNG Sbjct: 1 MSVPNEENLSSHSQLSSHFFLDLLDSIIVDVASECHRVARLGLDSNLEEEDEELKLSAQARVRVADPSNSNEANGKYVVDIFGQTHPPVANEIFDCMNCGRSIMAGRFAPHLEKCMGKGRKARLKVTRSSTAAQNRYSRGSPSPGSTYSPYSNYSTNSMNQLANGTSTFAGEEHSNG 177
BLAST of Ca_09021 vs. TrEMBL
Match: I3S1B6_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 8.821e-47 Identity = 102/179 (56.98%), Postives = 113/179 (63.13%), Query Frame = 1 Query: 1 MSVPNEENXXXXXXXXXXXXXXXXXXIIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRNSRG-XXXXXXXXXXXXXXXXXRLTNGNPSFAGEEHSNGASQP 534 MS PNEE+ IIVDVASECHR+A+ SAQARVR+ADP N+NE NGKY+VDIFGQTHP VA+EIFECMNC RSIMAG+FAPHLEKCMGKGRKARLKVTRSS+ Q R SRG R NG+ SFAGE HSNG S+P Sbjct: 1 MSAPNEESPSSHSQLSSQFFSDLLDSIIVDVASECHRVARLGLDSNLEEEDEELKLSAQARVRVADPSNNNEANGKYLVDIFGQTHPPVADEIFECMNCGRSIMAGRFAPHLEKCMGKGRKARLKVTRSSTATQKRYSRGIPASRYSSYSNHSSNSINRSANGSSSFAGEGHSNGTSEP 179
BLAST of Ca_09021 vs. TrEMBL
Match: C6TA04_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.965e-46 Identity = 99/151 (65.56%), Postives = 106/151 (70.20%), Query Frame = 1 Query: 79 IIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRNSRG---XXXXXXXXXXXXXXXXXRLTNGNPSFAGEEHSNG 522 IIVDVASECHR+A+ SAQARVR+ADP NSNE NGKYVVDIFGQTHP VANEIF+CMNC RSIMAG+FAPHLEKCMGKGRKARLKVTRSS+ AQNR SRG RL NG +FAGEEHSNG Sbjct: 19 IIVDVASECHRVARLGLDSNLEEEDEELKLSAQARVRVADPSNSNEANGKYVVDIFGQTHPPVANEIFDCMNCGRSIMAGRFAPHLEKCMGKGRKARLKVTRSSTAAQNRYSRGSPSPGSTYSPYSNYSTNSMNRLANGTSTFAGEEHSNG 169
BLAST of Ca_09021 vs. TrEMBL
Match: B9RSC7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1474460 PE=4 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 5.718e-46 Identity = 101/174 (58.05%), Postives = 111/174 (63.79%), Query Frame = 1 Query: 1 MSVPNEENXXXXXXXXXXXXXXXXXXIIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRNSRGXXXXXXXXXXXXXXXXXRLTNGNPSFAGEEHSNG 522 MSVPNE+N IIVDVASECHRI K S QARVR+ADP S ETN KYVVDIFGQ+HP VANEIF+CMNC RSIMAG+FAPHLEKCMGKGRKARLK TRSS+ AQNR+SRG RL+NG P+ AGEE+SNG Sbjct: 16 MSVPNEDNMSPHTQLSSHFFGDLLDSIIVDVASECHRIVKLGLDRNLEEEEEELRLSTQARVRVADPSISGETNSKYVVDIFGQSHPPVANEIFDCMNCGRSIMAGRFAPHLEKCMGKGRKARLKATRSSTAAQNRHSRG-SPVSTYSPYSNSSSANRLSNGTPNLAGEEYSNG 188
BLAST of Ca_09021 vs. TrEMBL
Match: K7MQ78_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 1.078e-44 Identity = 96/151 (63.58%), Postives = 104/151 (68.87%), Query Frame = 1 Query: 79 IIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRNSRG---XXXXXXXXXXXXXXXXXRLTNGNPSFAGEEHSNG 522 IIVDVASECHR+A+ SAQARVR+ADP NSNE NGKYVVDIFGQTHP VANEIF+C+NC RSIMAG+FAPHLEKCMGKGRKARLKVTRSS+ QNR SRG RL G +FAGEEHSNG Sbjct: 39 IIVDVASECHRVARLGLDSNLEEEDEELKLSAQARVRVADPSNSNEANGKYVVDIFGQTHPPVANEIFDCLNCGRSIMAGRFAPHLEKCMGKGRKARLKVTRSSTATQNRYSRGGPSPGSTHSPYSNYSTNSMNRLAYGTSTFAGEEHSNG 189
BLAST of Ca_09021 vs. TrEMBL
Match: M5W0E3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012190mg PE=4 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 3.137e-44 Identity = 96/149 (64.43%), Postives = 103/149 (69.13%), Query Frame = 1 Query: 79 IIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRNSRGXXXXXXXXXXXXXXXXXRLTNGNPSFAGEEHSNGA 525 IIVDVASECHRIAK SAQARVR+ADP NS E N KYVVDIFGQTHPSVANE+FECMNC R+IMAG+FAPHLEKCMGKGRKAR KVTRSS+ AQ R SRG RL+NG AGEE+SNGA Sbjct: 29 IIVDVASECHRIAKLGLDRNFEEEEEELRLSAQARVRVADPSNSGEANSKYVVDIFGQTHPSVANEVFECMNCGRAIMAGRFAPHLEKCMGKGRKARAKVTRSSTAAQTRQSRG-NPASTYSTYSNSNSTSRLSNGTSGVAGEEYSNGA 176
BLAST of Ca_09021 vs. TrEMBL
Match: C6T7E5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 3.137e-44 Identity = 95/151 (62.91%), Postives = 104/151 (68.87%), Query Frame = 1 Query: 79 IIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRNSRG---XXXXXXXXXXXXXXXXXRLTNGNPSFAGEEHSNG 522 IIVDVASECHR+A+ SA+ARVR+ADP NSNE NGKYVVDIFGQTHP VANEIF+C+NC RSIMAG+FAPHLEKCMGKGRKARLKVTRSS+ QNR SRG RL G +FAGEEHSNG Sbjct: 39 IIVDVASECHRVARLGLDSNLEEEDEELKLSARARVRVADPSNSNEANGKYVVDIFGQTHPPVANEIFDCLNCGRSIMAGRFAPHLEKCMGKGRKARLKVTRSSTATQNRYSRGGPSPGSTHSPYSNYSTNSMNRLAYGTSTFAGEEHSNG 189
BLAST of Ca_09021 vs. TrEMBL
Match: F6GUM6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g06970 PE=4 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.034e-43 Identity = 93/148 (62.84%), Postives = 103/148 (69.59%), Query Frame = 1 Query: 79 IIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRNSRGXXXXXXXXXXXXXXXXXRLTNGNPSFAGEEHSNG 522 IIVDVASECHRIA+ SAQARVR+ADP NS E N KYVVDIFGQ+HP++A+EIFECMNC RSIMAG+FAPHLEKCMGKGRKARLK TRSS+ AQNR SRG RL+NG P GEE+SNG Sbjct: 17 IIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADPSNSGEANSKYVVDIFGQSHPAIASEIFECMNCGRSIMAGRFAPHLEKCMGKGRKARLKATRSSTAAQNRYSRG-SPVSSYSPYSNSTSTSRLSNGTPGVGGEEYSNG 163
BLAST of Ca_09021 vs. TrEMBL
Match: B9GGQ7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_641504 PE=4 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 2.656e-43 Identity = 97/177 (54.80%), Postives = 108/177 (61.02%), Query Frame = 1 Query: 1 MSVPNEENXXXXXXXXXXXXXXXXXXIIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRNSRGXXXXXXXXXXXXXXXXXRLTNGNPSFAGEEHSNGASQ 531 MSVPNE+N IIVDVASECHR+A+ SAQARV +ADP NS ETNGKYVVDIFGQTHP VANE+F+CMNC R I+AG+FAPHLEKCMGKGRKAR K TRSS+ AQNR SRG RL NG S EE+SNG + Sbjct: 1 MSVPNEDNMSPHMQLSSHFFGDLLDSIIVDVASECHRVARLGLDRNLEEEEEELRLSAQARVTVADPSNSGETNGKYVVDIFGQTHPCVANEVFDCMNCGRPIVAGRFAPHLEKCMGKGRKARAKATRSSTAAQNRYSRG-SPVSANSPCSNSTSTNRLLNGTYSHTVEEYSNGTCE 176
BLAST of Ca_09021 vs. DB:Swiss
Match: AT7L3_DANRE (Ataxin-7-like protein 3 OS=Danio rerio OX=7955 GN=atxn7l3 PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.833e-9 Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 1 Query: 235 VDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKA 366 VDIFGQ + N+ C NCSRSI A +FAPHLEKC+G GR + Sbjct: 69 VDIFGQVYNQWKNKECVCPNCSRSIAASRFAPHLEKCLGMGRNS 112
BLAST of Ca_09021 vs. DB:Swiss
Match: AT7L3_HUMAN (Ataxin-7-like protein 3 OS=Homo sapiens OX=9606 GN=ATXN7L3 PE=1 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 4.081e-8 Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = 1 Query: 235 VDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRN 411 +DIFGQ ++ C NCSRSI A +FAPHLEKC+G GR + R + + N N Sbjct: 69 LDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRIANSNNMN 127
BLAST of Ca_09021 vs. DB:Swiss
Match: AT7L3_MOUSE (Ataxin-7-like protein 3 OS=Mus musculus OX=10090 GN=Atxn7l3 PE=1 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 4.322e-8 Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = 1 Query: 235 VDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRN 411 +DIFGQ ++ C NCSRSI A +FAPHLEKC+G GR + R + + N N Sbjct: 69 LDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRIANSNNMN 127
BLAST of Ca_09021 vs. DB:Swiss
Match: SGF11_ASHGO (SAGA-associated factor 11 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=SGF11 PE=3 SV=1) HSP 1 Score: 50.8322 bits (120), Expect = 1.407e-7 Identity = 19/41 (46.34%), Postives = 28/41 (68.29%), Query Frame = 1 Query: 235 VDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKG 357 +D++G+ P A+ F C NCSR + A +FA HLE+CM +G Sbjct: 61 LDVYGRPKPQEASVYFRCPNCSRDLSANRFAAHLERCMSRG 101 The following BLAST results are available for this feature:
BLAST of Ca_09021 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot) Total hits: 3
BLAST of Ca_09021 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_09021 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_09021_v1.0_kabuli ID=Ca_09021_v1.0_kabuli; Name=Ca_09021; organism=Cicer arietinum; type=mRNA; length=537bpback to top protein sequence of Ca_09021_v1.0_kabuli >Ca_09021_v1.0_kabuli ID=Ca_09021_v1.0_kabuli; Name=Ca_09021_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=178bpback to top mRNA from alignment at Ca5:25792306..25794658- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_09021_v1.0_kabuli ID=Ca_09021_v1.0_kabuli; Name=Ca_09021; organism=Cicer arietinum; type=mRNA; length=2353bp; location=Sequence derived from: Ca5:25792306..25794658- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:25792306..25794658- >Ca_09021_v1.0_kabuli ID=Ca_09021_v1.0_kabuli; Name=Ca_09021; organism=Cicer arietinum; type=CDS; length=537bp; location=Sequence derived from: Ca5:25792306..25794658- (Cicer arietinumback to top |