Ca_09021, Ca_09021_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_09021 vs. SwissProt
Match: AT7L3_DANRE (Ataxin-7-like protein 3 OS=Danio rerio GN=atxn7l3 PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.427e-8 Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 1 Query: 235 VDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQN 405 VDIFGQ + N+ C NCSRSI A +FAPHLEKC+G GR + R + + N Sbjct: 69 VDIFGQVYNQWKNKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRIASSNN 125
BLAST of Ca_09021 vs. SwissProt
Match: AT7L3_MOUSE (Ataxin-7-like protein 3 OS=Mus musculus GN=Atxn7l3 PE=2 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 7.082e-8 Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = 1 Query: 235 VDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRN 411 +DIFGQ ++ C NCSRSI A +FAPHLEKC+G GR + R + + N N Sbjct: 69 LDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRIANSNNMN 127
BLAST of Ca_09021 vs. SwissProt
Match: AT7L3_HUMAN (Ataxin-7-like protein 3 OS=Homo sapiens GN=ATXN7L3 PE=1 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 7.082e-8 Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = 1 Query: 235 VDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRN 411 +DIFGQ ++ C NCSRSI A +FAPHLEKC+G GR + R + + N N Sbjct: 69 LDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRIANSNNMN 127
BLAST of Ca_09021 vs. TrEMBL
Match: C6T4T1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 4.531e-43 Identity = 101/174 (58.05%), Postives = 108/174 (62.07%), Query Frame = 1 Query: 1 MSVPNEENXXXXXXXXXXXXXXXXXXIIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRNSRGXXXXXXXXXXXXXXXXXRLTNGNPSFAGEEHSNG 522 MSVPNEEN IIVDVASECHR+A+ SAQARVR+ADP NSNE NGKYVVDIFGQTHP VANEIF+C+NC RSIMAG+FAPHLEKCMGKGRKARLKVTRSS+ QNR SR G PS GEEHSNG Sbjct: 1 MSVPNEENLSYSQLSYFFLDLLDS--IIVDVASECHRVARLGLDSNLEEEDEELKLSAQARVRVADPSNSNEANGKYVVDIFGQTHPPVANEIFDCLNCGRSIMAGRFAPHLEKCMGKGRKARLKVTRSSTATQNRYSR----------------------GGPS-PGEEHSNG 149
BLAST of Ca_09021 vs. TrEMBL
Match: I1LLP1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.722e-42 Identity = 95/148 (64.19%), Postives = 102/148 (68.92%), Query Frame = 1 Query: 79 IIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRNSRGXXXXXXXXXXXXXXXXXRLTNGNPSFAGEEHSNG 522 IIVDVASECHR+A+ SAQARVR+ADP NSNE NGKYVVDIFGQTHP VANEIF+CMNC RSIMAG+FAPHLEKCMGKGRKARLKVTRSS+ AQNR SR G+PS GEEHSNG Sbjct: 19 IIVDVASECHRVARLGLDSNLEEEDEELKLSAQARVRVADPSNSNEANGKYVVDIFGQTHPPVANEIFDCMNCGRSIMAGRFAPHLEKCMGKGRKARLKVTRSSTAAQNRYSR----------------------GSPS-PGEEHSNG 143
BLAST of Ca_09021 vs. TrEMBL
Match: B9HNC7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_821349 PE=4 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.116e-41 Identity = 91/151 (60.26%), Postives = 103/151 (68.21%), Query Frame = 1 Query: 79 IIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRNSRGXXXXXXXXXXXXXXXXXRLTNGNPSFAGEEHSNGASQ 531 IIVDVASECHRIA+ SAQARV +ADP NS ETNGKYVVDIFGQTHPSVANE+F+CMNC R I+AG+FAPHLEKCMGKGRKAR+K TRSS+ AQNR SRG RL+NG + EE+SNG + Sbjct: 19 IIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVTVADPSNSGETNGKYVVDIFGQTHPSVANEVFDCMNCGRPIVAGRFAPHLEKCMGKGRKARVKATRSSTAAQNRYSRG-SPVSAHSSYSNSTSTNRLSNGTYNHTVEEYSNGTCE 168
BLAST of Ca_09021 vs. TrEMBL
Match: M1CZP6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400030447 PE=4 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.611e-40 Identity = 91/149 (61.07%), Postives = 101/149 (67.79%), Query Frame = 1 Query: 79 IIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRNSRGXXXXXXXXXXXXXXXXXRLTNGNPSFAGEEHSNGA 525 II DVASECHR+AK SAQAR +ADP NS+ETNGKYVVDIFGQTHP VA EIFECMNC RSIMAG+FAPHLEKCMGKGRKARLK TRSS+ AQNR +RG RL NG+ +G E+SNG+ Sbjct: 26 IITDVASECHRVAKLGLDRNLEEEEEELRLSAQARATVADPSNSSETNGKYVVDIFGQTHPPVATEIFECMNCGRSIMAGRFAPHLEKCMGKGRKARLKATRSST-AQNRYTRG-SSASTYSPYSTPTSTSRLPNGSSGVSGHEYSNGS 172
BLAST of Ca_09021 vs. TrEMBL
Match: I1LLP3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 2.749e-40 Identity = 83/110 (75.45%), Postives = 89/110 (80.91%), Query Frame = 1 Query: 79 IIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNR 408 IIVDVASECHR+A+ SAQARVR+ADP NSNE NGKYVVDIFGQTHP VANEIF+CMNC RSIMAG+FAPHLEKCMGKGRKARLKVTRSS+ AQNR Sbjct: 19 IIVDVASECHRVARLGLDSNLEEEDEELKLSAQARVRVADPSNSNEANGKYVVDIFGQTHPPVANEIFDCMNCGRSIMAGRFAPHLEKCMGKGRKARLKVTRSSTAAQNR 128
BLAST of Ca_09021 vs. TrEMBL
Match: K4CA75_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc06g082160.2 PE=4 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 4.688e-40 Identity = 90/149 (60.40%), Postives = 101/149 (67.79%), Query Frame = 1 Query: 79 IIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRNSRGXXXXXXXXXXXXXXXXXRLTNGNPSFAGEEHSNGA 525 II DVASECHR+AK SAQAR +ADP NS+ETNGKYVVDIFG+THP VA EIFECMNC RSIMAG+FAPHLEKCMGKGRKARLK TRSS+ AQNR +RG RL NG+ +G E+SNG+ Sbjct: 186 IITDVASECHRVAKLGLDRNLEEEEEELRLSAQARATVADPSNSSETNGKYVVDIFGRTHPPVATEIFECMNCGRSIMAGRFAPHLEKCMGKGRKARLKATRSST-AQNRYTRG-SSASTYSPYSTPTSTSRLPNGSSGVSGHEYSNGS 332
BLAST of Ca_09021 vs. TrEMBL
Match: D7MQE9_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_332145 PE=4 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 3.145e-36 Identity = 78/148 (52.70%), Postives = 96/148 (64.86%), Query Frame = 1 Query: 79 IIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRNSRGXXXXXXXXXXXXXXXXXRLTNGNPSFAGEEHSNG 522 +I DVASECHR+A+ S +AR ++ADP N+ ETN K+VVDIFGQTHP VA E+F CMNC R I+AG+FAPHLEKCMGKGRKAR K TRS++ AQNRN+R +L +G+P AGE+ SNG Sbjct: 352 VIADVASECHRVARLGLDRDLEVVEEELRLSVEARAKVADPSNNLETNTKFVVDIFGQTHPPVATEVFNCMNCGRQIVAGRFAPHLEKCMGKGRKARAKTTRSTTAAQNRNAR-RSPNPRYSPYPNSASENQLASGSPGVAGEDCSNG 498
BLAST of Ca_09021 vs. TrEMBL
Match: Q94BV2_ARATH (AT5g58570/mzn1_20 OS=Arabidopsis thaliana GN=AT5G58575 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 4.107e-36 Identity = 78/147 (53.06%), Postives = 96/147 (65.31%), Query Frame = 1 Query: 79 IIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRNSRGXXXXXXXXXXXXXXXXXRLTNGNPSFAGEEHSN 519 +I DVASECHR+A+ S +AR ++ADP N+ ETN KYVVDIFGQTHP VA+E+F CMNC R I+AG+FAPHLEKCMGKGRKAR K TRS++ AQNRN+R +L +G+P AGE+ SN Sbjct: 26 VIADVASECHRVARLGLDRDLDIVEEELRLSVEARAKIADPSNNLETNTKYVVDIFGQTHPPVASEVFNCMNCGRQIVAGRFAPHLEKCMGKGRKARAKTTRSTTAAQNRNAR-RSPNPRYSPYPNSASENQLASGSPGVAGEDCSN 171
BLAST of Ca_09021 vs. TrEMBL
Match: Q14K84_PLAAC (Putative uncharacterized protein (Fragment) OS=Platanus acerifolia PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 7.006e-36 Identity = 81/136 (59.56%), Postives = 91/136 (66.91%), Query Frame = 1 Query: 1 MSVPNEENXXXXXXXXXXXXXXXXXXIIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNR 408 MS PN++N IIVDVASE HRIA+ S QARVR ADP +S E NGKY VDIFGQTHP++A+EIFECMNC RSIMAG+FAPHLEKCMGKGRKARLK TRSS+ A+NR Sbjct: 1 MSAPNDDNDAHSQLSSHFLGGILDS-IIVDVASEFHRIARLGLDRNLEEEDEELRLSTQARVRAADPSSSGEANGKYAVDIFGQTHPAIADEIFECMNCRRSIMAGRFAPHLEKCMGKGRKARLKATRSSTSAKNR 135
BLAST of Ca_09021 vs. TrEMBL
Match: R0GP06_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10027217mg PE=4 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 2.662e-35 Identity = 77/151 (50.99%), Postives = 97/151 (64.24%), Query Frame = 1 Query: 79 IIVDVASECHRIAKXXXXXXXXXXXXXXXXSAQARVRMADPGNSNETNGKYVVDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRNSRGXXXXXXXXXXXXXXXXXRLTNGNPSFAGEEHSNGASQ 531 +I DVASECHR+A+ S +AR ++ADP N+ ETN K+VVDIFGQTHP VA+E+F CMNC R I+AG+FAPHLEKCMGKGRKAR K TRS++ AQNRNS+ +L + +P AGE+ +NG Q Sbjct: 26 VIADVASECHRVARLGLDRDLEVVEEELRLSVEARAKVADPSNNLETNTKFVVDIFGQTHPPVASEVFNCMNCGRQIVAGRFAPHLEKCMGKGRKARAKATRSTTAAQNRNSQ-RSPNPRYSPYANSVNENQLASRSPGVAGEDCTNGTVQ 175
BLAST of Ca_09021 vs. DB:Swiss
Match: AT7L3_DANRE (Ataxin-7-like protein 3 OS=Danio rerio OX=7955 GN=atxn7l3 PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.833e-9 Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 1 Query: 235 VDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKA 366 VDIFGQ + N+ C NCSRSI A +FAPHLEKC+G GR + Sbjct: 69 VDIFGQVYNQWKNKECVCPNCSRSIAASRFAPHLEKCLGMGRNS 112
BLAST of Ca_09021 vs. DB:Swiss
Match: AT7L3_HUMAN (Ataxin-7-like protein 3 OS=Homo sapiens OX=9606 GN=ATXN7L3 PE=1 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 4.081e-8 Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = 1 Query: 235 VDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRN 411 +DIFGQ ++ C NCSRSI A +FAPHLEKC+G GR + R + + N N Sbjct: 69 LDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRIANSNNMN 127
BLAST of Ca_09021 vs. DB:Swiss
Match: AT7L3_MOUSE (Ataxin-7-like protein 3 OS=Mus musculus OX=10090 GN=Atxn7l3 PE=1 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 4.322e-8 Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = 1 Query: 235 VDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKGRKARLKVTRSSSGAQNRN 411 +DIFGQ ++ C NCSRSI A +FAPHLEKC+G GR + R + + N N Sbjct: 69 LDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRIANSNNMN 127
BLAST of Ca_09021 vs. DB:Swiss
Match: SGF11_ASHGO (SAGA-associated factor 11 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=SGF11 PE=3 SV=1) HSP 1 Score: 50.8322 bits (120), Expect = 1.407e-7 Identity = 19/41 (46.34%), Postives = 28/41 (68.29%), Query Frame = 1 Query: 235 VDIFGQTHPSVANEIFECMNCSRSIMAGKFAPHLEKCMGKG 357 +D++G+ P A+ F C NCSR + A +FA HLE+CM +G Sbjct: 61 LDVYGRPKPQEASVYFRCPNCSRDLSANRFAAHLERCMSRG 101 The following BLAST results are available for this feature:
BLAST of Ca_09021 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot) Total hits: 3
BLAST of Ca_09021 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_09021 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_09021_v1.0_kabuli ID=Ca_09021_v1.0_kabuli; Name=Ca_09021; organism=Cicer arietinum; type=mRNA; length=537bpback to top protein sequence of Ca_09021_v1.0_kabuli >Ca_09021_v1.0_kabuli ID=Ca_09021_v1.0_kabuli; Name=Ca_09021_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=178bpback to top mRNA from alignment at Ca5:25792306..25794658- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_09021_v1.0_kabuli ID=Ca_09021_v1.0_kabuli; Name=Ca_09021; organism=Cicer arietinum; type=mRNA; length=2353bp; location=Sequence derived from: Ca5:25792306..25794658- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:25792306..25794658- >Ca_09021_v1.0_kabuli ID=Ca_09021_v1.0_kabuli; Name=Ca_09021; organism=Cicer arietinum; type=CDS; length=537bp; location=Sequence derived from: Ca5:25792306..25794658- (Cicer arietinumback to top |