Ca_19220, Ca_19220_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_19220 vs. TrEMBL
Match: G7ZXK0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_060s0021 PE=4 SV=1) HSP 1 Score: 429.098 bits (1102), Expect = 8.384e-118 Identity = 229/298 (76.85%), Postives = 250/298 (83.89%), Query Frame = 1 Query: 1 MNCSVSGVSGLDNFDAKKFGTFSTDQQTREFMMNRFLPAAKAMTIQPSQYSSKKQSVVLVEQQLRDINKLVQNAKKPLVNKHTTDIIPYTGQVQDDESEDEGDVYDNDNSASMLSKGCGLLPNLHIRNSLSLLNPVAGIKMKNQGPL-ISASEVGKTNKSSHIRSFSPVPAVKKAWEAIHKNKSSNEVAPLEI---------ESNRFGFSDEL-PGRLSPFRRSRAAAAGISPCRSKPQSPFQGVKLLGDAKETEINKSGNLKFYSTGLGKVQGVPNQGAKRSSYLGSLAIEKTLYID 861 +NCSVSGVSGLDN +AKKFGTFSTDQQTR+FMMNRFLPAAKAMTIQPSQYSSKK SV LVEQQ RD+NKLVQNAKKPLV TDIIPYTG+ Q++ESEDEGDVYDNDNS S+L KGCGLLPNLH+RNSL LN VAG+K+KNQ L SA EV K NK S IRSFSP+PAVKKAWEAIH+NKSS A E ESNRF +S EL PGRLSPFRRSRAAAAGISPCRS+ QSPF+G KLLGD+ E E NKS NLKF+S+GLGK+QGVPNQGAKRSSY GSLA+EKTLYID Sbjct: 179 LNCSVSGVSGLDNLEAKKFGTFSTDQQTRDFMMNRFLPAAKAMTIQPSQYSSKKPSV-LVEQQPRDVNKLVQNAKKPLV----TDIIPYTGECQEEESEDEGDVYDNDNSDSVLGKGCGLLPNLHVRNSLPSLNSVAGMKVKNQVTLPSSACEVVKPNKRSSIRSFSPIPAVKKAWEAIHRNKSSTAAASPETQEGKKRWSSESNRFAYSGELLPGRLSPFRRSRAAAAGISPCRSRQQSPFRGTKLLGDSNEAETNKSCNLKFHSSGLGKIQGVPNQGAKRSSYSGSLAMEKTLYID 471
BLAST of Ca_19220 vs. TrEMBL
Match: G7I7X5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_1g050940 PE=4 SV=1) HSP 1 Score: 429.098 bits (1102), Expect = 8.384e-118 Identity = 229/298 (76.85%), Postives = 250/298 (83.89%), Query Frame = 1 Query: 1 MNCSVSGVSGLDNFDAKKFGTFSTDQQTREFMMNRFLPAAKAMTIQPSQYSSKKQSVVLVEQQLRDINKLVQNAKKPLVNKHTTDIIPYTGQVQDDESEDEGDVYDNDNSASMLSKGCGLLPNLHIRNSLSLLNPVAGIKMKNQGPL-ISASEVGKTNKSSHIRSFSPVPAVKKAWEAIHKNKSSNEVAPLEI---------ESNRFGFSDEL-PGRLSPFRRSRAAAAGISPCRSKPQSPFQGVKLLGDAKETEINKSGNLKFYSTGLGKVQGVPNQGAKRSSYLGSLAIEKTLYID 861 +NCSVSGVSGLDN +AKKFGTFSTDQQTR+FMMNRFLPAAKAMTIQPSQYSSKK SV LVEQQ RD+NKLVQNAKKPLV TDIIPYTG+ Q++ESEDEGDVYDNDNS S+L KGCGLLPNLH+RNSL LN VAG+K+KNQ L SA EV K NK S IRSFSP+PAVKKAWEAIH+NKSS A E ESNRF +S EL PGRLSPFRRSRAAAAGISPCRS+ QSPF+G KLLGD+ E E NKS NLKF+S+GLGK+QGVPNQGAKRSSY GSLA+EKTLYID Sbjct: 179 LNCSVSGVSGLDNLEAKKFGTFSTDQQTRDFMMNRFLPAAKAMTIQPSQYSSKKPSV-LVEQQPRDVNKLVQNAKKPLV----TDIIPYTGECQEEESEDEGDVYDNDNSDSVLGKGCGLLPNLHVRNSLPSLNSVAGMKVKNQVTLPSSACEVVKPNKRSSIRSFSPIPAVKKAWEAIHRNKSSTAAASPETQEGKKRWSSESNRFAYSGELLPGRLSPFRRSRAAAAGISPCRSRQQSPFRGTKLLGDSNEAETNKSCNLKFHSSGLGKIQGVPNQGAKRSSYSGSLAMEKTLYID 471
BLAST of Ca_19220 vs. TrEMBL
Match: I1MES9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 390.193 bits (1001), Expect = 4.316e-106 Identity = 211/300 (70.33%), Postives = 237/300 (79.00%), Query Frame = 1 Query: 1 MNCSVSGVSGLDNFDAKKFGTFSTDQQTREFMMNRFLPAAKAMTIQPSQYSSKKQSVVLVEQQLRDINKLVQNAKKPLVNKHTTDIIPYTGQVQDDESEDEGDVYDNDNSASMLSKGCGLLPNLHIRNSLSLLNPVAGIKMKNQGPLISASEVGKTNKSSHIRSFSPVPAVKKAWEAIHKNKSSNEVAPLE---------IESNRFGFSDE-LPGRLSPFRRSRAAAAGISPCRSKPQSPFQGVKLLGDAKETEINKSGNLKFYSTGLGKVQGVPNQGAKRSSYLGSLAIEKTLYIDIIS 870 MNCSVSGVSGL+N A K G+FSTDQQTR+FMM+RFLPAAKAMT+ P QYSSKKQS LVEQQ RD++KLV++ KK L KH T IIPYTGQ Q++ESEDE D + DNS+++ +KGCGLLP LHIRNSL LLNPVA +KMKNQ PL ASEV K NKSSHIRSFSPVPAVKKAWEAIHKNKSS+ A + ESNRF +S E LPGRLSPFRRSRAAAAGISPCRSKPQSPF+G KL GD KE E K G +KF+S LG V VP+QGAKR+SY G+L IEKTLYID S Sbjct: 171 MNCSVSGVSGLENLGANKSGSFSTDQQTRDFMMSRFLPAAKAMTLLPPQYSSKKQSA-LVEQQPRDVSKLVRDDKKQLPIKHNTAIIPYTGQNQEEESEDEVDDNEYDNSSNIAAKGCGLLPQLHIRNSLCLLNPVAVMKMKNQAPLPPASEVVKPNKSSHIRSFSPVPAVKKAWEAIHKNKSSSRAASPDKQEGKKKWTSESNRFTYSGELLPGRLSPFRRSRAAAAGISPCRSKPQSPFRGAKLPGDTKEAENYKFGKVKFHSGVLGNVHDVPSQGAKRTSYSGNLTIEKTLYIDTAS 469
BLAST of Ca_19220 vs. TrEMBL
Match: K7KQI3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 1.351e-83 Identity = 172/303 (56.77%), Postives = 212/303 (69.97%), Query Frame = 1 Query: 1 MNCSVSGVSGLDNFDAKKFGTFSTDQQTREFMMNRFLPAAKAMTIQPSQYSSKKQSVVLVEQQLRDINKLVQNAKKPLVNKHTTDIIPYTGQVQDDESEDEGDVYDNDNSASMLSKGCGLLPNLHIRNSLSLLNPVAGIKMKNQGPLISASEVGKTNKSSHIRSFSPVPAVKKAWEAIHKNKSSNEVAPLE---------IESNRFGFSDELP--GRLSPFRRSRAAAAGISPCRSKPQSPFQGVKLLGDAKETEINKSGNLKFYSTGLGKVQGVPNQGAKRSSYLGSLAIEKTLYIDIISCL 876 MNCSVS VSGLDN A G STD+Q +FMM+RFL AAKAMTIQP QY+S ++ VL EQ R+ KLV KK V++H TDI+PYTGQ Q++E E+E + ++ A+ +KGCGL P L +RNSL LLNPV G KM NQ PL SA EVGK +KSSHIRS P P++KKAW+AI+K+KSS+ A + ES+R+ +S EL GRLSPFRRSRAA+AG+SP +SKPQ PF G KLLGD+K+ + N SG LKF S G +Q V +QGAKRS GSL +EKTLYID S + Sbjct: 167 MNCSVSDVSGLDNVVADMCGASSTDKQAHDFMMSRFLTAAKAMTIQPPQYASSRKQTVLTEQP-REFIKLVPEQKKSFVSRHITDIVPYTGQCQEEEEEEEESDNETNDYANNSAKGCGLFPRLCVRNSLCLLNPVPGTKMGNQFPLYSAYEVGKPDKSSHIRSHRPAPSIKKAWDAINKSKSSSRAASPDKQDVRKKWTSESSRYTYSGELKKLGRLSPFRRSRAASAGVSPFQSKPQPPFPGAKLLGDSKQDDNNHSGKLKFPSRGHSSIQEVLSQGAKRSYSFGSLTVEKTLYIDTASTI 468
BLAST of Ca_19220 vs. TrEMBL
Match: K7KQI1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 1.351e-83 Identity = 172/303 (56.77%), Postives = 212/303 (69.97%), Query Frame = 1 Query: 1 MNCSVSGVSGLDNFDAKKFGTFSTDQQTREFMMNRFLPAAKAMTIQPSQYSSKKQSVVLVEQQLRDINKLVQNAKKPLVNKHTTDIIPYTGQVQDDESEDEGDVYDNDNSASMLSKGCGLLPNLHIRNSLSLLNPVAGIKMKNQGPLISASEVGKTNKSSHIRSFSPVPAVKKAWEAIHKNKSSNEVAPLE---------IESNRFGFSDELP--GRLSPFRRSRAAAAGISPCRSKPQSPFQGVKLLGDAKETEINKSGNLKFYSTGLGKVQGVPNQGAKRSSYLGSLAIEKTLYIDIISCL 876 MNCSVS VSGLDN A G STD+Q +FMM+RFL AAKAMTIQP QY+S ++ VL EQ R+ KLV KK V++H TDI+PYTGQ Q++E E+E + ++ A+ +KGCGL P L +RNSL LLNPV G KM NQ PL SA EVGK +KSSHIRS P P++KKAW+AI+K+KSS+ A + ES+R+ +S EL GRLSPFRRSRAA+AG+SP +SKPQ PF G KLLGD+K+ + N SG LKF S G +Q V +QGAKRS GSL +EKTLYID S + Sbjct: 167 MNCSVSDVSGLDNVVADMCGASSTDKQAHDFMMSRFLTAAKAMTIQPPQYASSRKQTVLTEQP-REFIKLVPEQKKSFVSRHITDIVPYTGQCQEEEEEEEESDNETNDYANNSAKGCGLFPRLCVRNSLCLLNPVPGTKMGNQFPLYSAYEVGKPDKSSHIRSHRPAPSIKKAWDAINKSKSSSRAASPDKQDVRKKWTSESSRYTYSGELKKLGRLSPFRRSRAASAGVSPFQSKPQPPFPGAKLLGDSKQDDNNHSGKLKFPSRGHSSIQEVLSQGAKRSYSFGSLTVEKTLYIDTASTI 468
BLAST of Ca_19220 vs. TrEMBL
Match: K7L648_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 6.705e-83 Identity = 174/304 (57.24%), Postives = 214/304 (70.39%), Query Frame = 1 Query: 1 MNCSVSGVSGLDNFDAKKFGTFSTDQQTREFMMNRFLPAAKAMTIQPSQYSS-KKQSVVLVEQQLRDINKLVQNAKKPLVNKHTTDIIPYTGQVQDDESEDEGDVYDNDNSASMLSKGCGLLPNLHIRNSLSLLNPVAGIKMKNQGPLISASEVGKTNKSSHIRSFSPVPAVKKAWEAIHKNK---SSNEVAP--------LEIESNRFGFSDELP--GRLSPFRRSRAAAAGISPCRSKPQSPFQGVKLLGDAKETEINKSGNLKFYSTGLGKVQGVPNQGAKRSSYLGSLAIEKTLYIDIIS 870 MNCS+SGVSGLDN D + GT STD+Q +FMM+RFL AAKAMTIQP QY+S +KQ VL EQ R+ KLV KK VN+H TDI+PYTGQ Q++E E+E + ++ A+ +KGCGL P L +RNSL LLNPV G KM NQ PL SA EV K +KSSHIRS P PA+KKAW+AI+K+K SS +P ES+R+ +S EL GRLSPFRRSRAA+AG+SP RSKPQ PF G KLLGD+++ + N SG LKF + G +Q V +QGAK+S GSL++EKTLYID S Sbjct: 170 MNCSLSGVSGLDNVDENRCGTSSTDKQAHDFMMSRFLNAAKAMTIQPPQYASFRKQQPVLAEQP-REFIKLVPEQKKSFVNRHITDIVPYTGQCQEEEEEEEESDDETNDYANNSAKGCGLFPRLCVRNSLCLLNPVPGTKMGNQFPLYSAYEVVKPDKSSHIRSHRPAPAIKKAWDAINKSKLSSSSRAASPDKKDVRKKWTSESSRYNYSGELKQLGRLSPFRRSRAASAGVSPFRSKPQPPFPGAKLLGDSEQADNNHSGKLKFPNRGHASIQEVLSQGAKKSYSFGSLSVEKTLYIDTAS 472
BLAST of Ca_19220 vs. TrEMBL
Match: K7M1B8_SOYBN (Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 5.715e-58 Identity = 126/184 (68.48%), Postives = 139/184 (75.54%), Query Frame = 1 Query: 349 GCGLLPNLHIRNSLSLLNPVAGIKMKNQGPLISASEVGKTNKSSHIRSFSPVPAVKKAWEAIHKNKSSNEVAPLE---------IESNRFGFSDEL-PGRLSPFRRSRAAAAGISPCRSKPQSPFQGVKLLGDAKETEINKSGNLKFYSTGLGKVQGVPNQGAKRSSYLGSLAIEKTLYIDIIS 870 GCGLLP LHIRNSL LLNPVA +KMKN+ L ASEV K NKSSHIRSFSPVPAVKKAWEAIHK+KSS+ A + ESNRF +S EL PGRLSPFRRSRAAAAGISPCRSKPQSPF+G KL GD KE E G +KF+S LG V V +QGAKR+SY G+L IEKTLY+D S Sbjct: 1 GCGLLPQLHIRNSLCLLNPVAAMKMKNKAILPPASEVVKPNKSSHIRSFSPVPAVKKAWEAIHKSKSSSRAASPDKQEGKKKWTSESNRFTYSGELLPGRLSPFRRSRAAAAGISPCRSKPQSPFRGAKLPGDTKEAENYMFGKVKFHSGVLGNVHDVLSQGAKRTSYSGNLTIEKTLYVDTAS 184
BLAST of Ca_19220 vs. TrEMBL
Match: G7LJF0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_8g086460 PE=4 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.154e-50 Identity = 132/288 (45.83%), Postives = 178/288 (61.81%), Query Frame = 1 Query: 22 VSGLDNFDAKKFGTFSTD-QQTREFMMNRFLPAAKAMTIQPSQYSSKKQSVVLVEQQLRDINKLVQNAKKPLVN-KHTTDIIPYTGQVQDDESEDEGDVYDNDNSASMLSKGCGLLPNLHIRNSLSLLNPVAGIKMKNQGPLISASEVGKTNKSSHIRSFSPVPAVKKAWEAIHKNKSSNEVAPLEI---------ESNRF-GFSDELP--GRLSPFRRSRAAAAGISPCRSKPQSPFQGVKLLGDAKETEINKSGNLKFYSTGLGKVQGVPNQGAKRSSYLGSLAIE 843 VSGLDN DA K STD +Q +EFMMNRFLPAAKAMT+Q Q++ +KQSV+L + KLV K VN ++ TDI+PYT Q +++E E+E D + D A++ +KGCGL P I+NSL LLNP+ KM+NQ P+ S+++V K NKSS+ + P P +KKAW+AIHK+KSS+ + +I ES R+ +S EL R+S FRRS AA AG+S RS+PQS + E N+ LKF S G Q +QG+KRSS +L++E Sbjct: 131 VSGLDNLDANKCRISSTDDKQAQEFMMNRFLPAAKAMTLQTHQHAPRKQSVLLQQPS----TKLVSEEKNSFVNNRNITDIVPYTDQYREEE-EEESDHDETDYYANISAKGCGLFPTSCIKNSLCLLNPMPETKMENQIPVWSSNDVEKPNKSSYFSTNRPGPTIKKAWDAIHKSKSSSGASSPDIYEARKKWTSESKRYNAYSGELNQISRISSFRRSGAATAGVSSFRSRPQS------------QAENNQIRKLKFQSQGHESFQEAQSQGSKRSSNSRNLSME 401
BLAST of Ca_19220 vs. TrEMBL
Match: B9T6U4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0428070 PE=4 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 9.146e-48 Identity = 129/304 (42.43%), Postives = 176/304 (57.89%), Query Frame = 1 Query: 1 MNCSVSGVSGLDNFDAKKFGTFSTDQQTREFMMNRFLPAAKAMTIQPSQYSSKKQSVVLVEQQLRDINKLV-QNAKKPLVNKHTTDIIPYTGQVQDDESEDEGDVYDNDNSASMLSKGCGLLPNLHIRNSLSLLNPVAGIKMKNQGPLISASEVGKTNKSSHIRSFSPVPAVKKAWEAIHKNKSSNEVA---------PLEIESNRFGFSD--ELPGRLSPFRRSRAAAAGISPCRSK-PQSPFQGVKLLGDAKETEINKSGNLKFYSTGLGKVQG-VPNQGAKRSSYLGSLAIEKTLYIDIIS 870 +NCS+SGVSG DN K GTFS DQQ ++FMM+RFLPAAKAMT++P QY+S+KQ V +Q R K V ++ P++ + +I PY +D+ESEDE D D +S ++ +KGCG LP L I+NSL LLNPV G+K++ Q + S ++ K K+ RS SP K A A+ K K +EV L SNRF ++ ++ R SPFRRS ISP R++ PQSPF+G G K+ E KS ++ G K Q V G +R S S +EKTLY+D ++ Sbjct: 177 VNCSLSGVSGFDNLAVKPSGTFSIDQQAQDFMMSRFLPAAKAMTLEPPQYASRKQPV--SGEQPRQTTKAVNRDRTPPVIRNRSCNIPPYHQDKEDEESEDECD--DYSDSGNITAKGCGFLPRLCIKNSLCLLNPVPGMKIRTQTSMSSTKDIKKLTKAVFSRSQSPT-VKKPARNAVSKQKQDSEVPSPRMVGVENKLTGGSNRFTYATDRQMISRTSPFRRSGC----ISPHRNEAPQSPFRGRGSQGIPKQLENLKSNQFNSFNRGYSKSQELVSYNGIRRGSRPASPTVEKTLYVDTVN 471
BLAST of Ca_19220 vs. TrEMBL
Match: B9I1K9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_568706 PE=4 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 4.539e-47 Identity = 128/307 (41.69%), Postives = 179/307 (58.31%), Query Frame = 1 Query: 1 MNCSVSGVSGLDNFDAKKFGTFSTDQQTREFMMNRFLPAAKAMTIQPSQYSSKKQSVVLVEQQLRDINKLVQNAKKPLVNKHTTDIIPYTGQ-VQDDESEDEGDVYDNDNSASMLSKGCGLLPNLHIRNSLSLLNPVAGIKMKNQGPLISASEVGKTNKSSHIRSFSPV--PAVKKAWEAIHKNKSSNEVAPLEIE------SNRF--GFSDELPGRLSPFRRSRAA-----AAGISPCRSK-PQSPFQGVKLLGDAKETEINKSGNLKFYSTGLGKVQGVPN-QGAKRSSYLGSLAIEKTLYIDII 867 MNCS +G+SG D K GTF+TDQQTR+FMM+RFLPAAKAM ++P+ YSS+KQ +V+ +Q R I K+V + P K + IIP GQ +++ ESEDE D Y +NS + +K CG P L I+NSL LLNP+ G+K+ Q + S ++V K ++++H RS+S K A + ++ LE+E SNRF G + R SPFRRS A +SP R++ PQS F+G LG KE E ++ L Y G+ K Q + + G+KR S S +EKTLY+D + Sbjct: 230 MNCSATGLSGFDVPLVKPSGTFTTDQQTRDFMMSRFLPAAKAMALEPAHYSSRKQPIVI--EQSRQITKVVHENRTPPPIKSQSFIIPRYGQDIEEKESEDECDGY--ENSGDISTKACGWFPRLCIKNSLGLLNPIPGLKLGTQASMSSTNDVEKLSRAAHNRSYSQTVKKHFKDAANKLKQDSGGQSPKLLEVENKLSCSSNRFIYGSDRQTMSRTSPFRRSAGTSPFRRAGCVSPHRNEAPQSAFRGRGFLGIPKEAEDLRASRLNLYK-GISKSQELSSYYGSKRWSRPASPIVEKTLYVDTV 531 The following BLAST results are available for this feature:
BLAST of Ca_19220 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_19220 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_19220_v1.0_kabuli ID=Ca_19220_v1.0_kabuli; Name=Ca_19220; organism=Cicer arietinum; type=mRNA; length=882bpback to top protein sequence of Ca_19220_v1.0_kabuli >Ca_19220_v1.0_kabuli ID=Ca_19220_v1.0_kabuli; Name=Ca_19220_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=293bpback to top mRNA from alignment at Ca5:41584148..41585377+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_19220_v1.0_kabuli ID=Ca_19220_v1.0_kabuli; Name=Ca_19220; organism=Cicer arietinum; type=mRNA; length=1230bp; location=Sequence derived from: Ca5:41584148..41585377+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:41584148..41585377+ >Ca_19220_v1.0_kabuli ID=Ca_19220_v1.0_kabuli; Name=Ca_19220; organism=Cicer arietinum; type=CDS; length=882bp; location=Sequence derived from: Ca5:41584148..41585377+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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