Ca_06307, Ca_06307_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_06307 vs. TrEMBL
Match: K7L2P9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 5.174e-66 Identity = 143/217 (65.90%), Postives = 156/217 (71.89%), Query Frame = 1 Query: 1 MSATKAGVSRKRESELELTKSDNKKTNRSSTKNXXXXXXXXXXXXXKGIVSALHLIRDKAQKDDQKKNEETISSVASEIKSTIEGLRTKFEKERQTXXXXXXXXXXXXXXXXXNETTKFQALHDNFYKEKANSLQALQDIISKFEDEKEKLFMRYEQLRKKEKTMISEQEKTCNDKITQLEGSLXXXXXXXXTFSILRKTLGSFLESTSDEDFPPDD 651 MSA+K+G SRKR SE E KSD K RS+T N KGIVSALHLIRDKAQKD QKKNEETISSV SE+KS IEGL++K EK+RQ+ NET KFQA H+NF KEKA SLQAL+DIISKFE+EKEKLF+RYEQLRKKE+ MISEQEK CN KI QLE SL TFSILRKTLGSFLESTSDEDFPPDD Sbjct: 49 MSASKSG-SRKRASESERAKSDKNK--RSATDNFDLDLDFDLSDDIKGIVSALHLIRDKAQKDGQKKNEETISSVGSEVKSMIEGLKSKIEKDRQSFAKALSKSSKEYESSLKNETAKFQAFHENFCKEKATSLQALKDIISKFEEEKEKLFVRYEQLRKKERVMISEQEKACNHKIAQLEDSLRKKKQDDKTFSILRKTLGSFLESTSDEDFPPDD 262
BLAST of Ca_06307 vs. TrEMBL
Match: I1M0B0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 4.380e-65 Identity = 142/217 (65.44%), Postives = 155/217 (71.43%), Query Frame = 1 Query: 1 MSATKAGVSRKRESELELTKSDNKKTNRSSTKNXXXXXXXXXXXXXKGIVSALHLIRDKAQKDDQKKNEETISSVASEIKSTIEGLRTKFEKERQTXXXXXXXXXXXXXXXXXNETTKFQALHDNFYKEKANSLQALQDIISKFEDEKEKLFMRYEQLRKKEKTMISEQEKTCNDKITQLEGSLXXXXXXXXTFSILRKTLGSFLESTSDEDFPPDD 651 MSATK+ SRKR SE E KSD K RS+ N KGIVSALHLIRDKAQKD QKKNEETISSV SE+KS IEGLR+K EK+RQ+ NET KFQALH+NF KEKA+SLQAL+DIISKFE+EKEKLF+RYEQLRKKE+ MISEQEK CNDKI QLE SL TFSILRKTLGSFL + SDEDFPPDD Sbjct: 1 MSATKSA-SRKRASESERAKSDKNK--RSAPDNFDLDLDFDLSDDIKGIVSALHLIRDKAQKDGQKKNEETISSVGSEVKSMIEGLRSKIEKDRQSFAKALSKSSKEYESSLKNETAKFQALHENFCKEKASSLQALKDIISKFEEEKEKLFVRYEQLRKKERVMISEQEKACNDKIAQLEDSLKKKKKDDKTFSILRKTLGSFLGNASDEDFPPDD 214
BLAST of Ca_06307 vs. TrEMBL
Match: C6T4Q7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 2.750e-59 Identity = 134/214 (62.62%), Postives = 147/214 (68.69%), Query Frame = 1 Query: 1 MSATKAGVSRKRESELELTKSDNKKTNRSSTKNXXXXXXXXXXXXXKGIVSALHLIRDKAQKDDQKKNEETISSVASEIKSTIEGLRTKFEKERQTXXXXXXXXXXXXXXXXXNETTKFQALHDNFYKEKANSLQALQDIISKFEDEKEKLFMRYEQLRKKEKTMISEQEKTCNDKITQLEGSLXXXXXXXXTFSILRKTLGSFLESTSDEDFP 642 MSATK+ SRKR SE E KSD K RS+ N KGIVSALHLIRDKAQKD QKKNEETISSV SE+KS IEGLR+K EK+RQ+ NET KFQALH+NF KEKA+SLQAL+DIISKFE+EKEKLF+RYEQLRKKE+ MISEQEK CNDKI +LE SL TFSILRKTLGSFL FP Sbjct: 1 MSATKSA-SRKRASESERAKSDKNK--RSAPDNFDLDLDFDLSDDIKGIVSALHLIRDKAQKDGQKKNEETISSVGSEVKSMIEGLRSKIEKDRQSFAKALSKSSKEYESSLKNETAKFQALHENFCKEKASSLQALKDIISKFEEEKEKLFVRYEQLRKKERVMISEQEKACNDKIARLEDSLKKKKKDDKTFSILRKTLGSFLGKCLGRGFP 211
BLAST of Ca_06307 vs. TrEMBL
Match: B9RZ89_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0936350 PE=4 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 1.047e-50 Identity = 114/217 (52.53%), Postives = 141/217 (64.98%), Query Frame = 1 Query: 1 MSATKAGVSRKRESELELTKSDNKKTNRSSTKNXXXXXXXXXXXXXKGIVSALHLIRDKAQKDDQKKNEETISSVASEIKSTIEGLRTKFEKERQTXXXXXXXXXXXXXXXXXNETTKFQALHDNFYKEKANSLQALQDIISKFEDEKEKLFMRYEQLRKKEKTMISEQEKTCNDKITQLEGSLXXXXXXXXTFSILRKTLGSFLESTSDEDFPPDD 651 MSA K ++ SE L KS++K + KGI+SALH IR+K QKD QKKNEETISS++SEI+S ++ L++K EK+RQ+ NET KFQ ++D F KEKA LQALQD ISKFE++KEKLF+RYEQL+KKE+ +I+EQEK C +KI LE SL TFSILRKTLGSFLE+ SDEDFPPDD Sbjct: 1 MSAAKTNSKKRTASESVLKKSESK------FRVVDDELDVDLSSDIKGIMSALHQIREKTQKDGQKKNEETISSLSSEIRSMMDQLKSKVEKDRQSFAKALSKSSKECENCLKNETAKFQEIYDKFCKEKAAHLQALQDTISKFEEDKEKLFLRYEQLKKKERNIIAEQEKACAEKIANLEESLKKKKQDDKTFSILRKTLGSFLENASDEDFPPDD 211
BLAST of Ca_06307 vs. TrEMBL
Match: B9N3F2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_580898 PE=4 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 5.379e-47 Identity = 104/174 (59.77%), Postives = 123/174 (70.69%), Query Frame = 1 Query: 139 KGIVSALHLIRDKAQKDDQKKNEETIS---SVASEIKSTIEGLRTKFEKERQTXXXXXXXXXXXXXXXXXNETTKFQALHDNFYKEKANSLQALQDIISKFEDEKEKLFMRYEQLRKKEKTMISEQEKTCNDKITQLEGSLXXXXXXXXTFSILRKTLGSFLESTSDEDFPPDD 651 KGI+SALH IR+KAQKD KKNE+TIS V SEIKS I+ L++K EK+RQT +ET KFQ ++D F KEK LQAL+D +SKFE++KE+L MRYEQ+RKKEK+MISE EKTC DKI +LE SL TFSILRK+LGSFLE SDEDFPPDD Sbjct: 39 KGIMSALHQIREKAQKDGLKKNEQTISRLVDVGSEIKSMIDELKSKIEKDRQTFAKALSKSSKECENWLKSETAKFQEIYDKFCKEKEAHLQALKDTVSKFEEDKERLCMRYEQMRKKEKSMISEHEKTCADKIAKLEESLKKKKQDGKTFSILRKSLGSFLEDASDEDFPPDD 212
BLAST of Ca_06307 vs. TrEMBL
Match: M1CWK7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400029689 PE=4 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 4.554e-46 Identity = 108/217 (49.77%), Postives = 140/217 (64.52%), Query Frame = 1 Query: 1 MSATKAGVSRKRESELELTKSDNKKTNRSSTKNXXXXXXXXXXXXXKGIVSALHLIRDKAQKDDQKKNEETISSVASEIKSTIEGLRTKFEKERQTXXXXXXXXXXXXXXXXXNETTKFQALHDNFYKEKANSLQALQDIISKFEDEKEKLFMRYEQLRKKEKTMISEQEKTCNDKITQLEGSLXXXXXXXXTFSILRKTLGSFLESTSDEDFPPDD 651 MSA+K+ +RKR SE ++ KS++K+ KGI++AL IR+KAQ+D KK EETISSV SE+KS I+ L+ K EK+RQ NET KFQ++++ F KEKA LQ+L+D ISK+E+EKE+LFMRYEQLRKKEK+MISE E+ +I++LE SL FS LRKTLGSFL++ SDEDFPPDD Sbjct: 1 MSASKSS-ARKRVSEPQIPKSESKRR----VSAVEDEFDAEISDDIKGIMTALKQIREKAQQDGLKKKEETISSVTSEVKSKIDELKVKLEKDRQGFAKALSKSSKECENLLKNETAKFQSIYEKFNKEKATHLQSLRDTISKYEEEKERLFMRYEQLRKKEKSMISELEQDSKKRISELEESLKKKKQDDKAFSFLRKTLGSFLDNASDEDFPPDD 212
BLAST of Ca_06307 vs. TrEMBL
Match: B9H2V7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1075503 PE=4 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 8.588e-45 Identity = 113/218 (51.83%), Postives = 135/218 (61.93%), Query Frame = 1 Query: 1 MSATKAGVSRKRESELELTKSDNKKTNRSSTKNXXXXXXXXXXXXXKGIVSALHLIRDKAQKDDQKKNEETISSVASEIKSTIEGLRTKFEKERQTXXXXXXXXXXXXXXXXXNETTKFQALHDNFYKEKANSLQALQ-DIISKFEDEKEKLFMRYEQLRKKEKTMISEQEKTCNDKITQLEGSLXXXXXXXXTFSILRKTLGSFLESTSDEDFPPDD 651 MSA K S+KR +E LTKS +K KGI+SAL IR+K+QKD QKKNE+TISSV SEIKS I+ L+ K EK+RQT +ET KFQ ++D F KEKA LQA + D +S+FE++KE L MRYEQ+RKKEK+MISE EKTC DKI QL SL TF ILRK+LGSFLE SDEDF P+D Sbjct: 1 MSAAKTS-SKKRVAESLLTKSASKFRVEDE-------FDPDFSSDIKGIMSALQQIREKSQKDGQKKNEQTISSVGSEIKSMIDELKCKIEKDRQTFAKALTKSSKECENCLKSETAKFQEIYDKFCKEKATHLQAQKADTVSRFEEDKETLCMRYEQMRKKEKSMISEHEKTCADKIAQLAESLKKKKQDDKTFCILRKSLGSFLEYASDEDFLPED 210
BLAST of Ca_06307 vs. TrEMBL
Match: M5WQ15_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024901mg PE=4 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 1.122e-44 Identity = 107/217 (49.31%), Postives = 139/217 (64.06%), Query Frame = 1 Query: 1 MSATKAGVSRKRESELELTKSDNKKTNRSSTKNXXXXXXXXXXXXXKGIVSALHLIRDKAQKDDQKKNEETISSVASEIKSTIEGLRTKFEKERQTXXXXXXXXXXXXXXXXXNETTKFQALHDNFYKEKANSLQALQDIISKFEDEKEKLFMRYEQLRKKEKTMISEQEKTCNDKITQLEGSLXXXXXXXXTFSILRKTLGSFLESTSDEDFPPDD 651 MS KA ++KR +E + KSD+ + + + KGI+SALH IR+KA D KKNEETISSVA+E++S I+ L++K EK+RQ+ ET KFQAL++ F K++AN LQAL+ IIS +E+EKE+L RYEQLRKKE+++ISE EK+C DKI +LE SL TFS+LRKTLGSFLE SDED P DD Sbjct: 1 MSTAKAS-NKKRRTEPQRAKSDHLDLDLDLSNDI------------KGIMSALHQIREKAHNDGLKKNEETISSVAAEVRSVIDDLKSKVEKDRQSFAKSLSKSSKECENCLKTETAKFQALYEKFCKDQANHLQALKGIISNYEEEKERLCTRYEQLRKKERSLISEHEKSCTDKIAKLEESLKKKKQDDRTFSVLRKTLGSFLE--SDEDIPADD 202
BLAST of Ca_06307 vs. TrEMBL
Match: F4IFY5_ARATH (Uncharacterized protein OS=Arabidopsis thaliana GN=AT2G33793 PE=4 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 1.465e-44 Identity = 104/218 (47.71%), Postives = 134/218 (61.47%), Query Frame = 1 Query: 1 MSATKAGVSRKRESELELTKSDNKKTNRSSTKNXXXXXXXXXXXXXKGIVSALHLIRDKAQKDDQKKNEETISSVASEIKSTIEGLRTKFEKERQTXXXXXXXXXXXXXXXXXNETTKFQALHDNFYKEKANSLQALQDIISKFEDEKEKLFMRYEQLRKKEKTMISEQEKTCNDKITQLEGSLXXXXXXXXTFSILRKTLGSFLES-TSDEDFPPDD 651 MS+T+ G R R + K K + KGI+SAL R+KA +D +KK EE+ISSV++E+KS I+ L++K EKERQ +E KF+ LH F K+KA+ LQ L+D ISKFE++KE+L+MRYEQLRKKEKTMI+EQEK C +K+ QLE SL TFSILRKTLGSFLE+ SDE+FPPD+ Sbjct: 1 MSSTRRGTKRTRPEPPQSLKKPTPKAKLPDELDVDVSSDF------KGIMSALQQFREKAHEDGRKKKEESISSVSTEVKSKIDELKSKLEKERQNFSKALSKSSKECENILKDEAAKFEELHKKFVKDKADHLQGLKDTISKFEEDKERLYMRYEQLRKKEKTMITEQEKFCTEKLAQLEESLKKKKRGDKTFSILRKTLGSFLENEASDEEFPPDE 212
BLAST of Ca_06307 vs. TrEMBL
Match: R0HMG8_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024038mg PE=4 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 1.913e-44 Identity = 102/218 (46.79%), Postives = 138/218 (63.30%), Query Frame = 1 Query: 1 MSATKAGVSRKRESELELTKSDNKKTNRSSTKNXXXXXXXXXXXXXKGIVSALHLIRDKAQKDDQKKNEETISSVASEIKSTIEGLRTKFEKERQTXXXXXXXXXXXXXXXXXNETTKFQALHDNFYKEKANSLQALQDIISKFEDEKEKLFMRYEQLRKKEKTMISEQEKTCNDKITQLEGSLXXXXXXXXTFSILRKTLGSFLES-TSDEDFPPDD 651 M++T+ G + KR K T ++ ++ KG++SAL IR+KA +D +KK EE+ISSV++E+KS I+ L++K EKERQ +E KF+ LH F K+KA+ LQ L+D +SKFE++KE+L+MRYEQLRKKEKTMI+EQEK C +K+ QLE SL TFSILRKTLGSFLE+ SDE+FPP+D Sbjct: 1 MASTRRGTTNKRARPEPPQSLKKKLTPKAKLQDDSDPDDSSDL---KGLMSALQQIREKAHEDGRKKKEESISSVSTEVKSKIDELKSKLEKERQNFAKALSKSSKECENILKDEAAKFEELHKKFMKDKADHLQGLKDTVSKFEEDKERLYMRYEQLRKKEKTMITEQEKFCTEKLAQLEESLKKKKRNDKTFSILRKTLGSFLENEASDEEFPPED 215 The following BLAST results are available for this feature:
BLAST of Ca_06307 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_06307 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_06307_v1.0_kabuli ID=Ca_06307_v1.0_kabuli; Name=Ca_06307; organism=Cicer arietinum; type=mRNA; length=654bpback to top protein sequence of Ca_06307_v1.0_kabuli >Ca_06307_v1.0_kabuli ID=Ca_06307_v1.0_kabuli; Name=Ca_06307_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=217bpback to top mRNA from alignment at Ca6:16768599..16770348+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_06307_v1.0_kabuli ID=Ca_06307_v1.0_kabuli; Name=Ca_06307; organism=Cicer arietinum; type=mRNA; length=1750bp; location=Sequence derived from: Ca6:16768599..16770348+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca6:16768599..16770348+ >Ca_06307_v1.0_kabuli ID=Ca_06307_v1.0_kabuli; Name=Ca_06307; organism=Cicer arietinum; type=CDS; length=654bp; location=Sequence derived from: Ca6:16768599..16770348+ (Cicer arietinumback to top |