Ca_10070, Ca_10070_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_10070
Unique NameCa_10070_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length405
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca7chromosomeCa7:31938618..31941025 +Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR646Pisum sativum Cameor genome v1aPisum sativum
capsR673Pisum sativum Cameor genome v1aPisum sativum
cavuR587Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR609Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR630Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR648Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR659Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR681Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR730Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR740Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0956Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0982Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0993Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0061Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0065Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0120Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0261Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0408Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0419Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0661Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0790Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0917Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0988Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1233Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cazwsR565Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR567Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR581Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cavrvR592Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR635Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR644Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR649Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR658Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR685Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR711Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR726Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR556Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR587Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR598Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR621Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR273Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR317Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR318Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacarR540Cicer arietinum
cacarR582Cicer arietinum
cacarR587Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat04G0585200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
jg16294.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun10g172100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_014660417.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat4g187760.1Pisum sativum Cameor genome v1aPisum sativum
rna-KK1_000496Cajanus cajan Asha genome v1.0Cajanus cajan
rna-TanjilR_31590Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.010G137600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
evm.model.Chr10.1623Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-NM_001279044.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_10070-CDS1Ca_10070-CDS1Cicer arietinumCDS
Ca_10070-CDS2Ca_10070-CDS2Cicer arietinumCDS
Ca_10070-CDS3Ca_10070-CDS3Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_10070_v1.0_kabuliCa_10070_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_10070 vs. SwissProt
Match: RL34_SHEPW (50S ribosomal protein L34 OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=rpmH PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.163e-11
Identity = 32/43 (74.42%), Postives = 37/43 (86.05%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            KRTFQPS ++RKR+HGF AR AT GGRKVIARR AKGR R++A
Sbjct:    3 KRTFQPSNLKRKRSHGFRARMATVGGRKVIARRRAKGRARLSA 45
[Close]
BLAST of Ca_10070 vs. SwissProt
Match: RL34_SHEPA (50S ribosomal protein L34 OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=rpmH PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.163e-11
Identity = 32/43 (74.42%), Postives = 37/43 (86.05%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            KRTFQPS ++RKR+HGF AR AT GGRKVIARR AKGR R++A
Sbjct:    3 KRTFQPSNLKRKRSHGFRARMATVGGRKVIARRRAKGRARLSA 45
[Close]
BLAST of Ca_10070 vs. SwissProt
Match: RL34_SHELP (50S ribosomal protein L34 OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=rpmH PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.163e-11
Identity = 32/43 (74.42%), Postives = 37/43 (86.05%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            KRTFQPS ++RKR+HGF AR AT GGRKVIARR AKGR R++A
Sbjct:    3 KRTFQPSNLKRKRSHGFRARMATVGGRKVIARRRAKGRARLSA 45
[Close]
BLAST of Ca_10070 vs. SwissProt
Match: RL34_SHEHH (50S ribosomal protein L34 OS=Shewanella halifaxensis (strain HAW-EB4) GN=rpmH PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.163e-11
Identity = 32/43 (74.42%), Postives = 37/43 (86.05%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            KRTFQPS ++RKR+HGF AR AT GGRKVIARR AKGR R++A
Sbjct:    3 KRTFQPSNLKRKRSHGFRARMATVGGRKVIARRRAKGRARLSA 45
[Close]
BLAST of Ca_10070 vs. SwissProt
Match: RL34_PSEA6 (50S ribosomal protein L34 OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) GN=rpmH PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.163e-11
Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            KRTFQPS ++RKR+HGF AR ATK GRKVIA R AKGR R+TA
Sbjct:    2 KRTFQPSNLKRKRSHGFRARMATKNGRKVIANRRAKGRARLTA 44
[Close]
BLAST of Ca_10070 vs. SwissProt
Match: RL34_COLP3 (50S ribosomal protein L34 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=rpmH PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.163e-11
Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            KRTFQPS ++RKRNHGF AR ATK GR VIARR AKGR R++A
Sbjct:    2 KRTFQPSVLKRKRNHGFRARMATKNGRAVIARRRAKGRARLSA 44
[Close]
BLAST of Ca_10070 vs. SwissProt
Match: RL34_SHEON (50S ribosomal protein L34 OS=Shewanella oneidensis (strain MR-1) GN=rpmH PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.049e-11
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            KRTFQPS ++RKR+HGF AR AT GGRKV+ARR AKGR R++A
Sbjct:    3 KRTFQPSNLKRKRSHGFRARMATAGGRKVLARRRAKGRARLSA 45
[Close]
BLAST of Ca_10070 vs. SwissProt
Match: RL34_SHESW (50S ribosomal protein L34 OS=Shewanella sp. (strain W3-18-1) GN=rpmH PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.051e-10
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            KRTFQPS ++RKR+HGF AR AT GGRKV+ARR AKGR R++A
Sbjct:    3 KRTFQPSNLKRKRSHGFRARMATVGGRKVLARRRAKGRARLSA 45
[Close]
BLAST of Ca_10070 vs. SwissProt
Match: RL34_SHESR (50S ribosomal protein L34 OS=Shewanella sp. (strain MR-7) GN=rpmH PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.051e-10
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            KRTFQPS ++RKR+HGF AR AT GGRKV+ARR AKGR R++A
Sbjct:    3 KRTFQPSNLKRKRSHGFRARMATVGGRKVLARRRAKGRARLSA 45
[Close]
BLAST of Ca_10070 vs. SwissProt
Match: RL34_SHESM (50S ribosomal protein L34 OS=Shewanella sp. (strain MR-4) GN=rpmH PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.051e-10
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            KRTFQPS ++RKR+HGF AR AT GGRKV+ARR AKGR R++A
Sbjct:    3 KRTFQPSNLKRKRSHGFRARMATVGGRKVLARRRAKGRARLSA 45
[Close]
BLAST of Ca_10070 vs. TrEMBL
Match: Q6ZZ86_CICAR (Ribosomal protein L34 OS=Cicer arietinum GN=Lin1 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 3.845e-58
Identity = 116/134 (86.57%), Postives = 116/134 (86.57%), Query Frame = 1 
Query:    1 MASKTLLRNGVAXXXXXXXXXXXXXXXXXXPQPYIFPSLSKLQNFPQNDAESAKNLISSEGFLYPCGLPSLRFFLPNGDAPSSDEPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            MASKTLLRNGVA                  PQPYIFPSLSKLQNFPQNDAESAKNLISSEGFLYPCGLPSLRFFLPNGDAPSSDEPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA
Sbjct:    1 MASKTLLRNGVALLNRLSLSNSKSLLNSNNPQPYIFPSLSKLQNFPQNDAESAKNLISSEGFLYPCGLPSLRFFLPNGDAPSSDEPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 134
[Close]
BLAST of Ca_10070 vs. TrEMBL
Match: B7FGJ2_MEDTR (Ribosomal protein L34 OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 8.585e-50
Identity = 100/134 (74.63%), Postives = 111/134 (82.84%), Query Frame = 1 
Query:    1 MASKTLLRNGVAXXXXXXXXXXXXXXXXXXPQPYIFPSLSKLQNFPQNDAESAKNLISSEGFLYPCGLPSLRFFLPNGDAPSSDEPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            MASK+LLRNG A                  PQPY+FPS+SKLQNFPQ+DAES K L+ S+GFLYPCGLPSLRFFLP+GD+ SSDEPM+LFPKRTFQPSTIRRKRNHGFFARKAT+GGR+VIARRVAKGRFRITA
Sbjct:    1 MASKSLLRNGAALLNRLSLSNSKSLINYNNPQPYLFPSISKLQNFPQDDAESVKKLLCSDGFLYPCGLPSLRFFLPDGDS-SSDEPMILFPKRTFQPSTIRRKRNHGFFARKATRGGRRVIARRVAKGRFRITA 133
[Close]
BLAST of Ca_10070 vs. TrEMBL
Match: C6SW51_SOYBN (Ribosomal protein L34 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.422e-36
Identity = 81/109 (74.31%), Postives = 89/109 (81.65%), Query Frame = 1 
Query:   91 PQPY---IFPSLSKLQNF--PQNDAESAKNLISSEGFLYPCGLPSLRFFLPNGDAPSSDEPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            P P+   + PSLS+L     PQNDAE        +GFLYPCGLPSLRFFLP GDAPSSD+PMLLFPKRT+QPS IRRKRNHGFFARKATKGGR+VIARR+AKGRFRITA
Sbjct:   26 PNPHSQLLLPSLSRLPGAISPQNDAEFPHK----QGFLYPCGLPSLRFFLPQGDAPSSDDPMLLFPKRTYQPSVIRRKRNHGFFARKATKGGRRVIARRLAKGRFRITA 130
[Close]
BLAST of Ca_10070 vs. TrEMBL
Match: I1KGA6_SOYBN (Ribosomal protein L34 OS=Glycine max PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 4.136e-36
Identity = 78/102 (76.47%), Postives = 88/102 (86.27%), Query Frame = 1 
Query:  103 IFPSLSKLQNF--PQNDAESAKNLISSEGFLYPCGLPSLRFFLPNGDAPSSDEPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            + PSLS+L     PQNDAE       ++GFLYPCGLPSLRFFLP+G+APSSD+PMLLFPKRT+QPS IRRKRNHGFFARKATKGGR+VIARR+AKGRFRITA
Sbjct:   34 LLPSLSRLPGAISPQNDAEFPH----TQGFLYPCGLPSLRFFLPHGEAPSSDDPMLLFPKRTYQPSVIRRKRNHGFFARKATKGGRRVIARRLAKGRFRITA 131
[Close]
BLAST of Ca_10070 vs. TrEMBL
Match: I3S1W2_LOTJA (Ribosomal protein L34 OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.572e-35
Identity = 85/145 (58.62%), Postives = 101/145 (69.66%), Query Frame = 1 
Query:    1 MASKTLLRNG--VAXXXXXXXXXXXXXXXXXXPQPYIF--PSLSKLQNFPQNDAESAKNLISSEGFLYPCGLPSLRFFLPNG------DAPSSDE-PMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            MASKTLLR+G  +                   P P +F  P LSKL +FPQNDA+S   L++S+GFLYPCGLP L FFLP        + PS++E PMLLFPKR++QPST+RRKR HGFFARKATKGGR+VIARR+AKGR RITA
Sbjct:    1 MASKTLLRSGSTLLNRFSNSKSLLNPNLHPNHPLPQLFQIPPLSKLPSFPQNDADSPSKLLASQGFLYPCGLPDLSFFLPQATVDVSYECPSNEEDPMLLFPKRSYQPSTLRRKRVHGFFARKATKGGRRVIARRIAKGRSRITA 145
[Close]
BLAST of Ca_10070 vs. TrEMBL
Match: C6TMW1_SOYBN (Ribosomal protein L34 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 2.681e-35
Identity = 77/102 (75.49%), Postives = 87/102 (85.29%), Query Frame = 1 
Query:  103 IFPSLSKLQNF--PQNDAESAKNLISSEGFLYPCGLPSLRFFLPNGDAPSSDEPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            + PSLS+L     PQNDAE       ++GFLYPCGLPSLRFFLP+G+APSSD+PMLLFPK T+QPS IRRKRNHGFFARKATKGGR+VIARR+AKGRFRITA
Sbjct:   34 LLPSLSRLPGAISPQNDAEFPH----TQGFLYPCGLPSLRFFLPHGEAPSSDDPMLLFPKGTYQPSVIRRKRNHGFFARKATKGGRRVIARRLAKGRFRITA 131
[Close]
BLAST of Ca_10070 vs. TrEMBL
Match: M5XB86_PRUPE (Ribosomal protein L34 OS=Prunus persica GN=PRUPE_ppa012999mg PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 5.973e-35
Identity = 86/146 (58.90%), Postives = 95/146 (65.07%), Query Frame = 1 
Query:    1 MASKTLLRNGVAXXXXXXXXXXXXXXXXXXPQ---------PYIFPSLSKLQN---FPQNDAESAKNLISSEGFLYPCGLPSLRFFLPNGDAPSSDEPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            MASKTL+R G +                   Q         P +FPSLS        PQNDAES K  +S EG +YP GLP L FFLP+GD  SS EPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGR+VIARR+AKGR R+TA
Sbjct:    1 MASKTLIRTGASLMNRILSKPLLHPNPNSNHQIVSHGLEITPKLFPSLSNFDTSFRLPQNDAESLKR-VSYEGLVYPFGLPYLPFFLPDGDDSSSSEPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRRVIARRIAKGRSRVTA 145
[Close]
BLAST of Ca_10070 vs. TrEMBL
Match: B9S5W7_RICCO (Ribosomal protein L34 OS=Ricinus communis GN=RCOM_0655450 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 3.872e-34
Identity = 84/130 (64.62%), Postives = 93/130 (71.54%), Query Frame = 1 
Query:    1 MASKTLLRNGVAXXXXXXXXXXXXXXXXXXPQPYIFPSLSKLQN---FPQNDAESAKNLISSEGFLYPCGLPSLRFFLPNGDAPSSDEPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAK 381
            MA+KTL+R G +                  PQ  +FPS+SK QN   FPQND  S   L S+EGFL+P GLPSLRFFLP+GD  SS EPMLLFPKRTFQPS IRRKRNHGFFARKATKGGRKVIARR+AK
Sbjct:    1 MATKTLIRTGASLMNRMINRQILAHSLEITPQ--LFPSISKFQNSLHFPQNDTLSITRL-SNEGFLHPSGLPSLRFFLPDGD--SSSEPMLLFPKRTFQPSLIRRKRNHGFFARKATKGGRKVIARRIAK 125
[Close]
BLAST of Ca_10070 vs. TrEMBL
Match: Q84R26_ARATH (Ribosomal protein L34 OS=Arabidopsis thaliana GN=At3g13885 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 4.006e-31
Identity = 76/105 (72.38%), Postives = 83/105 (79.05%), Query Frame = 1 
Query:   97 PYIFPSLSKLQNF---PQNDAESAKNLISSEGFLYPCGLPSLRFFLPNGDAPSSDEPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            PY FPSLS LQ+      ND  S + L +  GFLYP GLPSL FFLP  D PSS EP+LLFPKRTFQPSTIRRKRNHGFFARKATKGGR+VIARR+AKGR R+TA
Sbjct:   46 PYFFPSLSNLQSSLISRPNDTASLQEL-NERGFLYPSGLPSLEFFLPEVD-PSS-EPLLLFPKRTFQPSTIRRKRNHGFFARKATKGGRRVIARRIAKGRHRVTA 147
[Close]
BLAST of Ca_10070 vs. TrEMBL
Match: D7L296_ARALL (Ribosomal protein L34 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478793 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 4.006e-31
Identity = 76/105 (72.38%), Postives = 83/105 (79.05%), Query Frame = 1 
Query:   97 PYIFPSLSKLQNF---PQNDAESAKNLISSEGFLYPCGLPSLRFFLPNGDAPSSDEPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            PY FPSLS LQ+      ND  S + L +  GFLYP GLPSL FFLP  D PSS EP+LLFPKRTFQPSTIRRKRNHGFFARKATKGGR+VIARR+AKGR R+TA
Sbjct:   46 PYFFPSLSNLQSSLISRPNDTASLQEL-NERGFLYPSGLPSLEFFLPEVD-PSS-EPLLLFPKRTFQPSTIRRKRNHGFFARKATKGGRRVIARRIAKGRHRVTA 147
[Close]
BLAST of Ca_10070 vs. DB:Swiss
Match: RL34_PSEA6 (50S ribosomal protein L34 OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) OX=342610 GN=rpmH PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 7.803e-13
Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            KRTFQPS ++RKR+HGF AR ATK GRKVIA R AKGR R+TA
Sbjct:    2 KRTFQPSNLKRKRSHGFRARMATKNGRKVIANRRAKGRARLTA 44
[Close]
BLAST of Ca_10070 vs. DB:Swiss
Match: RL34_MARMS (50S ribosomal protein L34 OS=Marinomonas sp. (strain MWYL1) OX=400668 GN=rpmH PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.164e-12
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            KRTFQPS ++RKRNHGF AR ATKGGR+VIARR A+GR  ++A
Sbjct:    2 KRTFQPSVLKRKRNHGFRARMATKGGRQVIARRRARGRKVLSA 44
[Close]
BLAST of Ca_10070 vs. DB:Swiss
Match: RL34_PSYWF (50S ribosomal protein L34 OS=Psychrobacter sp. (strain PRwf-1) OX=349106 GN=rpmH PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.525e-12
Identity = 31/43 (72.09%), Postives = 35/43 (81.40%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            KRTFQPS I+RKR HGF AR ATK GR+V+ARR AKGR R+T 
Sbjct:    2 KRTFQPSVIKRKRTHGFRARMATKKGRQVLARRRAKGRHRLTV 44
[Close]
BLAST of Ca_10070 vs. DB:Swiss
Match: RL34_PSYCK (50S ribosomal protein L34 OS=Psychrobacter cryohalolentis (strain K5) OX=335284 GN=rpmH PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.525e-12
Identity = 31/43 (72.09%), Postives = 35/43 (81.40%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            KRTFQPS I+RKR HGF AR ATK GR+V+ARR AKGR R+T 
Sbjct:    2 KRTFQPSVIKRKRTHGFRARMATKKGRQVLARRRAKGRHRLTV 44
[Close]
BLAST of Ca_10070 vs. DB:Swiss
Match: RL34_PSYA2 (50S ribosomal protein L34 OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) OX=259536 GN=rpmH PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.525e-12
Identity = 31/43 (72.09%), Postives = 35/43 (81.40%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            KRTFQPS I+RKR HGF AR ATK GR+V+ARR AKGR R+T 
Sbjct:    2 KRTFQPSVIKRKRTHGFRARMATKKGRQVLARRRAKGRHRLTV 44
[Close]
BLAST of Ca_10070 vs. DB:Swiss
Match: RL34_THISH (50S ribosomal protein L34 OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX=396588 GN=rpmH PE=3 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 2.794e-12
Identity = 30/41 (73.17%), Postives = 35/41 (85.37%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRI 396
            KRTFQPST++RKR HGF AR AT+GGRKV+A R AKGR R+
Sbjct:    2 KRTFQPSTLKRKRTHGFRARMATRGGRKVLAARRAKGRVRL 42
[Close]
BLAST of Ca_10070 vs. DB:Swiss
Match: RL34_DICNV (50S ribosomal protein L34 OS=Dichelobacter nodosus (strain VCS1703A) OX=246195 GN=rpmH PE=3 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 2.852e-12
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:  268 FPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
              KRTFQPS + RKR HGF AR ATK GR+V++RR AKGR+R+T 
Sbjct:    1 MSKRTFQPSNLSRKRTHGFRARMATKNGRQVLSRRRAKGRYRLTV 45
[Close]
BLAST of Ca_10070 vs. DB:Swiss
Match: RL34_PSEU5 (50S ribosomal protein L34 OS=Pseudomonas stutzeri (strain A1501) OX=379731 GN=rpmH PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.054e-11
Identity = 30/43 (69.77%), Postives = 35/43 (81.40%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            KRTFQPSTI+R R HGF AR ATK GR+V++RR AKGR R+T 
Sbjct:    2 KRTFQPSTIKRARTHGFRARMATKNGRQVLSRRRAKGRKRLTV 44
[Close]
BLAST of Ca_10070 vs. DB:Swiss
Match: RL34_PHOLL (50S ribosomal protein L34 OS=Photorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01) OX=243265 GN=rpmH PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.569e-11
Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 402
            KRTFQPS ++R R+HGF AR ATK GR+V+ARR AKGR R+T 
Sbjct:    2 KRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRTRLTV 44
[Close]
BLAST of Ca_10070 vs. DB:Swiss
Match: RL34_SERP5 (50S ribosomal protein L34 OS=Serratia proteamaculans (strain 568) OX=399741 GN=rpmH PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.621e-11
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 1 
Query:  274 KRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRIT 399
            KRTFQPS ++R R+HGF AR ATK GR+V+ARR AKGR R+T
Sbjct:    2 KRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRSRLT 43
The following BLAST results are available for this feature:
BLAST of Ca_10070 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
RL34_SHEPW6.163e-1174.4250S ribosomal protein L34 OS=Shewanella piezotoler... [more]
RL34_SHEPA6.163e-1174.4250S ribosomal protein L34 OS=Shewanella pealeana (... [more]
RL34_SHELP6.163e-1174.4250S ribosomal protein L34 OS=Shewanella loihica (s... [more]
RL34_SHEHH6.163e-1174.4250S ribosomal protein L34 OS=Shewanella halifaxens... [more]
RL34_PSEA66.163e-1174.4250S ribosomal protein L34 OS=Pseudoalteromonas atl... [more]
RL34_COLP36.163e-1174.4250S ribosomal protein L34 OS=Colwellia psychreryth... [more]
RL34_SHEON8.049e-1172.0950S ribosomal protein L34 OS=Shewanella oneidensis... [more]
RL34_SHESW1.051e-1072.0950S ribosomal protein L34 OS=Shewanella sp. (strai... [more]
RL34_SHESR1.051e-1072.0950S ribosomal protein L34 OS=Shewanella sp. (strai... [more]
RL34_SHESM1.051e-1072.0950S ribosomal protein L34 OS=Shewanella sp. (strai... [more]

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BLAST of Ca_10070 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
Q6ZZ86_CICAR3.845e-5886.57Ribosomal protein L34 OS=Cicer arietinum GN=Lin1 P... [more]
B7FGJ2_MEDTR8.585e-5074.63Ribosomal protein L34 OS=Medicago truncatula PE=2 ... [more]
C6SW51_SOYBN1.422e-3674.31Ribosomal protein L34 OS=Glycine max PE=2 SV=1[more]
I1KGA6_SOYBN4.136e-3676.47Ribosomal protein L34 OS=Glycine max PE=3 SV=1[more]
I3S1W2_LOTJA1.572e-3558.62Ribosomal protein L34 OS=Lotus japonicus PE=2 SV=1[more]
C6TMW1_SOYBN2.681e-3575.49Ribosomal protein L34 OS=Glycine max PE=2 SV=1[more]
M5XB86_PRUPE5.973e-3558.90Ribosomal protein L34 OS=Prunus persica GN=PRUPE_p... [more]
B9S5W7_RICCO3.872e-3464.62Ribosomal protein L34 OS=Ricinus communis GN=RCOM_... [more]
Q84R26_ARATH4.006e-3172.38Ribosomal protein L34 OS=Arabidopsis thaliana GN=A... [more]
D7L296_ARALL4.006e-3172.38Ribosomal protein L34 OS=Arabidopsis lyrata subsp.... [more]

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BLAST of Ca_10070 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RL34_PSEA67.803e-1374.4250S ribosomal protein L34 OS=Pseudoalteromonas atl... [more]
RL34_MARMS1.164e-1272.0950S ribosomal protein L34 OS=Marinomonas sp. (stra... [more]
RL34_PSYWF1.525e-1272.0950S ribosomal protein L34 OS=Psychrobacter sp. (st... [more]
RL34_PSYCK1.525e-1272.0950S ribosomal protein L34 OS=Psychrobacter cryohal... [more]
RL34_PSYA21.525e-1272.0950S ribosomal protein L34 OS=Psychrobacter arcticu... [more]
RL34_THISH2.794e-1273.1750S ribosomal protein L34 OS=Thioalkalivibrio sulf... [more]
RL34_DICNV2.852e-1264.4450S ribosomal protein L34 OS=Dichelobacter nodosus... [more]
RL34_PSEU51.054e-1169.7750S ribosomal protein L34 OS=Pseudomonas stutzeri ... [more]
RL34_PHOLL1.569e-1167.4450S ribosomal protein L34 OS=Photorhabdus luminesc... [more]
RL34_SERP51.621e-1169.0550S ribosomal protein L34 OS=Serratia proteamacula... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000271Ribosomal protein L34PRODOMPD003101Q6ZZ86_CICAR_Q6ZZ86;coord: 92..129
score: 4
IPR000271Ribosomal protein L34HAMAPMF_00391Ribosomal_L34coord: 91..134
score: 13
IPR000271Ribosomal protein L34PANTHERPTHR14503FAMILY NOT NAMEDcoord: 89..134
score: 8.8
IPR000271Ribosomal protein L34PFAMPF00468Ribosomal_L34coord: 91..134
score: 7.4
IPR000271Ribosomal protein L34TIGRFAMsTIGR01030rpmH_bact: ribosomal protein L34coord: 92..134
score: 1.3
IPR020939Ribosomal protein L34, conserved sitePROSITEPS00784RIBOSOMAL_L34coord: 92..111
score
NoneNo IPR availableSEGsegsegcoord: 13..30
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_10070_v1.0_kabuli ID=Ca_10070_v1.0_kabuli; Name=Ca_10070; organism=Cicer arietinum; type=mRNA; length=405bp
ATGGCATCGAAAACTCTTCTAAGAAATGGAGTTGCGTTGTTGAATCGATT
ATCATTATCAAATTCGAAATCACTTCTGAATTCCAATAACCCTCAACCTT
ACATTTTCCCATCCCTCTCAAAACTCCAGAATTTCCCTCAAAACGACGCC
GAATCAGCGAAGAATCTTATTTCATCCGAAGGGTTTCTCTACCCTTGTGG
TCTCCCTTCTCTTCGCTTCTTCTTACCTAATGGGGATGCTCCTTCATCAG
ACGAACCAATGCTTTTATTCCCAAAAAGAACATTTCAGCCTAGCACTATC
CGGAGAAAGAGGAATCATGGGTTTTTTGCTCGGAAAGCAACCAAGGGTGG
CAGAAAAGTAATTGCTCGAAGAGTAGCCAAGGGTCGGTTTAGGATTACAG
CTTAG
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protein sequence of Ca_10070_v1.0_kabuli

>Ca_10070_v1.0_kabuli ID=Ca_10070_v1.0_kabuli; Name=Ca_10070_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=134bp
MASKTLLRNGVALLNRLSLSNSKSLLNSNNPQPYIFPSLSKLQNFPQNDA
ESAKNLISSEGFLYPCGLPSLRFFLPNGDAPSSDEPMLLFPKRTFQPSTI
RRKRNHGFFARKATKGGRKVIARRVAKGRFRITA
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mRNA from alignment at Ca7:31938618..31941025+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_10070_v1.0_kabuli ID=Ca_10070_v1.0_kabuli; Name=Ca_10070; organism=Cicer arietinum; type=mRNA; length=2408bp; location=Sequence derived from: Ca7:31938618..31941025+ (Cicer arietinum
ATGGCATCGAAAACTCTTCTAAGAAATGGAGTTGCGTTGTTGAATCGATT
ATCATTATCAAATTCGAAATCACTTCTGAATTCCAATAACCCTCAACCTT
ACATTTTCCCATCCCTCTCAAAACTCCAGAATTTCCCTCAAAACGACGCC
GAATCAGCGAAGAATCTTATTTCATCCGAAGGGTTTCTCTACCCTTGTGG
TCTCCCTTCTCTTCGCTTCTTCTTACCTAATGGTACTTAAGTTGAACCTC
TTTTTTTTTTTTAGAAAAAAAATTGGGTATTTTTTGTTAGGTTATAAGGT
TTTGTTTTTTGTGGTGATTGATGAATAATGTGGGTGAAGATGATACACGT
AAGTTGAAATGCTTGTTTGGTAATTATTTGAAATTTGCAACAGTGAAGTT
TTAATTTGAAATTTGAAGGAAATGAAGAATTTCTTTTAAATCCAAATTTA
TTTTAATTGCAATTGACCGGTTAAATGTCAGGTTGATAATCGATGTAGTA
GTTTTCTGAACGTAGCATTGCTGTGATTCATGTTGTTTGGTGATATTTTC
ATTGATTTATCAGGCTAATTTCTAATTTATTGGTTGTGTTGAGTTATCAA
AGTTTAATGTAATTAGTATAAATTGTATGACTAAAAGCTTAAACTTAAGT
TAGATATGTCTTTTTTTTGTCACCTGTTGAAATTTTACTTACAAGACCAA
ACAACTGAATAAGAAGAGACTTATTTTGGTTCCATGTTAGTTCACTTTAC
TTATGCATTCAAGACCAGATAGATGAGGAGGTCTGTTCAAAAGTAAAATT
TTGTGAATTTTATAATGGAAATCATGTAAAATTCTGTTGCTTCTAGTTTG
GTTTTGTGCTTGATTGTTGTGCATATATAATCATGGAAAATATGAACATC
AAAGGGGAATTCAGGAATGGCATAGGATACCCGTCCCCAAATATATGATA
TATCTATATAGAGGATTCACTTCAAAATTTATTTACTGGGTAACTTTTTA
TAAATTATACATTTAACGAATCCAACCACTGAACATCATTATTATTGGTG
ATATGATATTTTTATGTTGGTTATGCACACCAAATTTTATACACTGGAGT
GAAGTTTTTTGATGAAGTATTAATTTGTTTTTAAATGTATGAATTTATAG
TGTCTTCATTGAATAATGAAGAAAATTCAACGTCCATAAAAAGTTATTGA
GTAGAATAAGTTTTGCAGTTTAACAAAACTTACTCCTATAGTTTTCGGAT
TTCTACGTATATACTCAAATTGCTTTCCAATTTGTCTAGCTTTACATTTC
TATTGCAAGGTGTATTTCTTGTACTATCTTAAACAGAAGATGATGCTTCA
TGAAATTTGAAGCAATTTACACCCCTCTAGTTTTTTTTAATTAGTGTTCA
TTCTTGCTCTGCAGGGGATGCTCCTTCATCAGACGAACCAATGCTTTTAT
TCCCAAAAAGAACATTTCAGCCTAGCACTATCCGGAGAAAGAGGAATCAT
GGGTTTTTTGCTCGGTAAATCTCTCATCTTTTTATCCAGATGTCTTTTTT
GATCCTTTATTTTTTTAAATAAGAGAAGATGACTGGTGAAGCATTCCTTT
TCTTTGACATGTGTGTCAATGTTGGTAAATTTTAAATTCTTGTGGAGAAT
GTCACCATGCTTCAGGACACTAAATGGCTATGCAAAATCAAATAGGCATA
TATAGAGGATTTGAAGAAGATGGTCAGTTAACGTTGACACCTAATATGGT
TTCATTATACCTTCTATTGCTTAGATCTCTTGGCTTGGGGAATAGGTGAA
TAAATAACTTGGAAATCATGAAGAATATTTGAAATCTTTTTAATGAATAA
AAATTAGAACCTATGTTTGAACTGTACATGGATTGTTTCTTGGAAAATGA
CACCACATTGAATATTGTTGCCTATGTCTCTGACTCTCTACACTATGGTT
GCTTTGATTTTTCCATAGATGAGTTGATAATAAGGGCTTCTAGCAAAATC
TGGATCATTTTTCTGAACAAATAATATGAGTGGATAAGTGGGGATTGCAT
TGCAGACTATGACCAGGCAAAGTGTCATACTTGGTGCATGCTTTTATTAG
GCCTAAAAACTGCTTGCTTCATTTTGTTATTTTTTTTAAATTGTCGCCAG
TCCTCTTCAACAAAGGAATAGTCATGGGTCCACTTCCCAGAGAATTCAAA
ATATTATGGCACTTCCACTTGTGGATGGGAAATAACTGCTAAGTTTTTTT
ATATAGCTTACATGCAAATTCACATTAGTAATCTCAATCAGAACTGTGTT
GCGTAGATGACATACTTTTTCTTTTGCTTGAGCAGGAAAGCAACCAAGGG
TGGCAGAAAAGTAATTGCTCGAAGAGTAGCCAAGGGTCGGTTTAGGATTA
CAGCTTAG
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Coding sequence (CDS) from alignment at Ca7:31938618..31941025+

>Ca_10070_v1.0_kabuli ID=Ca_10070_v1.0_kabuli; Name=Ca_10070; organism=Cicer arietinum; type=CDS; length=405bp; location=Sequence derived from: Ca7:31938618..31941025+ (Cicer arietinum
ATGGCATCGAAAACTCTTCTAAGAAATGGAGTTGCGTTGTTGAATCGATT
ATCATTATCAAATTCGAAATCACTTCTGAATTCCAATAACCCTCAACCTT
ACATTTTCCCATCCCTCTCAAAACTCCAGAATTTCCCTCAAAACGACGCC
GAATCAGCGAAGAATCTTATTTCATCCGAAGGGTTTCTCTACCCTTGTGG
TCTCCCTTCTCTTCGCTTCTTCTTACCTAATGGGGATGCTCCTTCATCAG
ACGAACCAATGCTTTTATTCCCAAAAAGAACATTTCAGCCTAGCACTATC
CGGAGAAAGAGGAATCATGGGTTTTTTGCTCGGAAAGCAACCAAGGGTGG
CAGAAAAGTAATTGCTCGAAGAGTAGCCAAGGGTCGGTTTAGGATTACAG
CTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000271Ribosomal_bL34
IPR020939Ribosomal_L34_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation