Ca_11356.1, Ca_11356.1_ICC4958_v2 (mRNA) Cicer arietinum

Transcript Overview
NameCa_11356.1
Unique NameCa_11356.1_ICC4958_v2
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length2850
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca_LG_4supercontigCa_LG_4:44736600..44739449 +Cicer arietinum ICC 4958 genome v2n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum ICC 4958 genome v22015-08-11
InterProScan: C. arietinum ICC 4958, v2.0 (desi)2019-05-21
BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot2019-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
caipsR430Pisum sativum Cameor genome v1aPisum sativum
caipvR0388Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caipvR0497Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caivuR0430Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ancaiL0711Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0815Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL1084Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiL505Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaiL605Vigna angularis Jingnong 6 genome v1.1Vigna angularis
caizwsR451Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
caitifR409Vicia faba cv. Tiffany genome v1.0Vicia faba
caivfhR406Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caivssR0466Vicia sativa cv. Studenica genome v1.0Vicia sativa
caivssR0530Vicia sativa cv. Studenica genome v1.0Vicia sativa
caivuaR386Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
caicanR0375Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanR0449Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
jg31750.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
jg1055.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat06G0221700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-TanjilR_19610Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
LR48_mrnaVigan03g242200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.001G189600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004493974.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Ca_11356Ca_11356_ICC4958_v2Cicer arietinumgene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_11356.1.utr5p1Ca_11356.1.utr5p1_ICC4958_v2Cicer arietinumfive_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_11356.1.exon1Ca_11356.1.exon1_ICC4958_v2Cicer arietinumexon
Ca_11356.1.exon2Ca_11356.1.exon2_ICC4958_v2Cicer arietinumexon
Ca_11356.1.exon3Ca_11356.1.exon3_ICC4958_v2Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_11356.1.cds1Ca_11356.1.cds1_ICC4958_v2Cicer arietinumCDS
Ca_11356.1.cds2Ca_11356.1.cds2_ICC4958_v2Cicer arietinumCDS
Ca_11356.1.cds3Ca_11356.1.cds3_ICC4958_v2Cicer arietinumCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_11356.1.utr3p1Ca_11356.1.utr3p1_ICC4958_v2Cicer arietinumthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_11356.1_ICC4958_v2Ca_11356.1_ICC4958_v2Cicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_11356.1 vs. DB:Swiss
Match: ISAM1_ARATH (Iron-sulfur assembly protein IscA-like 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g16710 PE=2 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 7.754e-75
Identity = 104/133 (78.20%), Postives = 122/133 (91.73%), Query Frame = 1 
Query:    4 GSKAMAMAAEKIGTAVRRQAVSLTDAAASRIRYLLQQRQRPFLKLGVKARGCNGLTYTLNYADEKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESFMTTPSTGGAKQ 402
             S+ +A AA ++G A+R+Q ++LTD AASR+ +LLQQRQ+PFL+LGVKARGCNGL+YTLNYADEKGKFDELVE+KGV+IL++PKALMHVIGTKMDFVDDKLRSEFVFINPNS+GQCGCGESFMTT ST  AKQ
Sbjct:    3 ASQILAAAAARVGPALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLRSEFVFINPNSQGQCGCGESFMTT-STSSAKQ 134
[Close]
BLAST of Ca_11356.1 vs. DB:Swiss
Match: ISAM3_ARATH (Iron-sulfur assembly protein IscA-like 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g36260 PE=3 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 5.867e-59
Identity = 80/110 (72.73%), Postives = 100/110 (90.91%), Query Frame = 1 
Query:   49 VRRQAVSLTDAAASRIRYLLQQRQRPFLKLGVKARGCNGLTYTLNYADEKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESFMTT 378
            +R+Q ++L+D AA+RIR LLQ +Q+PFL+L V+A+GCNGL+Y LNYA EKGKFDE+VE+KGVKIL+DPKA+MHVIGT+MDFVDDKLRSEFVF+NPN+  +CGCGESF TT
Sbjct:    1 MRKQVLALSDTAAARIRQLLQHQQKPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEKGVKILVDPKAVMHVIGTEMDFVDDKLRSEFVFVNPNAT-KCGCGESFTTT 109
[Close]
BLAST of Ca_11356.1 vs. DB:Swiss
Match: Y484_RICPR (Uncharacterized protein RP484 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=RP484 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.091e-39
Identity = 54/107 (50.47%), Postives = 83/107 (77.57%), Query Frame = 1 
Query:   55 RQAVSLTDAAASRIRYLLQQRQRPF--LKLGVKARGCNGLTYTLNYADEKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 369
            +  +SLTDAAA +++ L+++R +P   +++G+K+ GC G TY + YAD K +FDE+VE+KGV+ILIDPK LM+++G++MD+V+   +S+F F NPN K  CGCG+SF
Sbjct:    2 KNVISLTDAAAKQVKLLIEKRAKPTFGIRVGIKSGGCAGQTYYVEYADNKNQFDEVVEEKGVRILIDPKTLMYILGSEMDYVETNFKSQFTFTNPNEKANCGCGKSF 108
[Close]
BLAST of Ca_11356.1 vs. DB:Swiss
Match: ISCA1_DROME (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Drosophila melanogaster OX=7227 GN=MagR PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.080e-37
Identity = 63/106 (59.43%), Postives = 78/106 (73.58%), Query Frame = 1 
Query:   55 RQAVSLTDAAASRIRYLLQQRQRPF-LKLGVKARGCNGLTYTLNYADEKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 369
            R A++LT AA  RI+ LLQ +     LK+GV+ RGCNGL+YTL+YA +K K DE V   GVK+ ID KA + ++GT+MDFV+ KL SEFVF NPN KG CGCGESF
Sbjct:   23 RAALTLTPAAVLRIKTLLQDKPDMVGLKVGVRQRGCNGLSYTLDYASQKDKLDEEVVQDGVKVFIDKKAQLSLLGTEMDFVESKLSSEFVFNNPNIKGTCGCGESF 128
[Close]
BLAST of Ca_11356.1 vs. DB:Swiss
Match: ISA1_YEAST (Iron-sulfur assembly protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ISA1 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.718e-37
Identity = 58/103 (56.31%), Postives = 76/103 (73.79%), Query Frame = 1 
Query:   64 VSLTDAAASRIRYLLQQRQRPFLKLGVKARGCNGLTYTLNYADEKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESFM 372
            ++L+  A   +R LL Q +   +++  + RGC+GLTY L Y  E GKFDE+VE  GVKI+ID KAL  +IG++MD++DDKL S+FVF NPNSKG CGCGESFM
Sbjct:  147 ITLSPKAIKHLRALLAQPEPKLIRVSARNRGCSGLTYDLQYITEPGKFDEVVEQDGVKIVIDSKALFSIIGSEMDWIDDKLASKFVFKNPNSKGTCGCGESFM 249
[Close]
BLAST of Ca_11356.1 vs. DB:Swiss
Match: ISCA1_DICDI (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=isca1 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.772e-35
Identity = 53/118 (44.92%), Postives = 86/118 (72.88%), Query Frame = 1 
Query:   34 KIGTAVRRQAVSLTDAAASRIRYLLQQRQRPF---LKLGVKARGCNGLTYTLNYADEKGKFDE-LVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESFMT 375
            K+G   ++   S+TD+A  R++ ++  ++      L+LG+K RGC+G++YTL++A +K KFDE +V DK + I++D KAL+ VIGT+MD++++ ++ EF+FINPN+   CGCGESF T
Sbjct:    8 KLGKPSKKAIFSMTDSALKRVKEIMNDKKIDNCIGLRLGIKERGCSGMSYTLDFATQKNKFDETVVADKDINIIVDSKALLSVIGTEMDYIEEPIKKEFIFINPNATNTCGCGESFTT 125
[Close]
BLAST of Ca_11356.1 vs. DB:Swiss
Match: ISCA1_CHICK (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Gallus gallus OX=9031 GN=ISCA1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.266e-35
Identity = 60/121 (49.59%), Postives = 81/121 (66.94%), Query Frame = 1 
Query:   10 KAMAMAAEKIGTAVRRQAVSLTDAAASRIRYLLQ-QRQRPFLKLGVKARGCNGLTYTLNYADEKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 369
            +A   A  K      R A++LT +A  +I+ LL+ Q +   +K+GV+ RGCNGL+YTL Y   KG  DE V   GV++ I+ KA + ++GT+MD+V+DKL SEFVF NPN KG CGCGESF
Sbjct:    7 RATVRAVSKRKIQATRAALTLTPSAVQKIKQLLKDQPEHVGVKVGVRTRGCNGLSYTLEYTKSKGDSDEEVVQDGVRVFIEKKAQLTLLGTEMDYVEDKLSSEFVFNNPNIKGTCGCGESF 127
[Close]
BLAST of Ca_11356.1 vs. DB:Swiss
Match: ISCA1_COLLI (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Columba livia OX=8932 GN=ISCA1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.718e-35
Identity = 59/121 (48.76%), Postives = 80/121 (66.12%), Query Frame = 1 
Query:   10 KAMAMAAEKIGTAVRRQAVSLTDAAASRIRYLLQQRQRPF-LKLGVKARGCNGLTYTLNYADEKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 369
            +A   A  K      R A++LT +A  +I+ LL+ +     +K+GV+ RGCNGL+YTL Y   KG  DE V   GV++ I+ KA + ++GT+MD+V+DKL SEFVF NPN KG CGCGESF
Sbjct:   10 RATVRAVSKRKIQATRAALTLTPSAVQKIKELLKDKPEHVGVKVGVRTRGCNGLSYTLEYTKSKGDSDEEVVQDGVRVFIEKKAQLTLLGTEMDYVEDKLSSEFVFNNPNIKGTCGCGESF 130
[Close]
BLAST of Ca_11356.1 vs. DB:Swiss
Match: ISCA1_MACFA (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Macaca fascicularis OX=9541 GN=ISCA1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.253e-34
Identity = 59/121 (48.76%), Postives = 81/121 (66.94%), Query Frame = 1 
Query:   10 KAMAMAAEKIGTAVRRQAVSLTDAAASRIRYLLQQRQRPF-LKLGVKARGCNGLTYTLNYADEKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 369
            +A   A  K      R A++LT +A ++I+ LL+ +     +K+GV+ RGCNGL+YTL Y   KG  DE V   GV++ I+ KA + ++GT+MD+V+DKL SEFVF NPN KG CGCGESF
Sbjct:    7 RATVRAVSKRKLQPTRAALTLTPSAVNKIKQLLKDKPEHVGVKVGVRTRGCNGLSYTLEYTKTKGDSDEEVIQDGVRVFIEKKAQLTLLGTEMDYVEDKLSSEFVFNNPNIKGTCGCGESF 127
[Close]
BLAST of Ca_11356.1 vs. DB:Swiss
Match: ISCA1_HUMAN (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Homo sapiens OX=9606 GN=ISCA1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.253e-34
Identity = 59/121 (48.76%), Postives = 81/121 (66.94%), Query Frame = 1 
Query:   10 KAMAMAAEKIGTAVRRQAVSLTDAAASRIRYLLQQRQRPF-LKLGVKARGCNGLTYTLNYADEKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 369
            +A   A  K      R A++LT +A ++I+ LL+ +     +K+GV+ RGCNGL+YTL Y   KG  DE V   GV++ I+ KA + ++GT+MD+V+DKL SEFVF NPN KG CGCGESF
Sbjct:    7 RATVRAVSKRKLQPTRAALTLTPSAVNKIKQLLKDKPEHVGVKVGVRTRGCNGLSYTLEYTKTKGDSDEEVIQDGVRVFIEKKAQLTLLGTEMDYVEDKLSSEFVFNNPNIKGTCGCGESF 127
The following BLAST results are available for this feature:
BLAST of Ca_11356.1 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
ISAM1_ARATH7.754e-7578.20Iron-sulfur assembly protein IscA-like 1, mitochon... [more]
ISAM3_ARATH5.867e-5972.73Iron-sulfur assembly protein IscA-like 3, mitochon... [more]
Y484_RICPR2.091e-3950.47Uncharacterized protein RP484 OS=Rickettsia prowaz... [more]
ISCA1_DROME1.080e-3759.43Iron-sulfur cluster assembly 1 homolog, mitochondr... [more]
ISA1_YEAST3.718e-3756.31Iron-sulfur assembly protein 1 OS=Saccharomyces ce... [more]
ISCA1_DICDI2.772e-3544.92Iron-sulfur cluster assembly 1 homolog, mitochondr... [more]
ISCA1_CHICK3.266e-3549.59Iron-sulfur cluster assembly 1 homolog, mitochondr... [more]
ISCA1_COLLI6.718e-3548.76Iron-sulfur cluster assembly 1 homolog, mitochondr... [more]
ISCA1_MACFA2.253e-3448.76Iron-sulfur cluster assembly 1 homolog, mitochondr... [more]
ISCA1_HUMAN2.253e-3448.76Iron-sulfur cluster assembly 1 homolog, mitochondr... [more]
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InterPro
Analysis Name: InterProScan: C. arietinum ICC 4958, v2.0 (desi)
Date Performed: 2019-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016092FeS cluster insertion proteinTIGRFAMTIGR00049TIGR00049coord: 22..124
e-value: 2.0E-34
score: 115.9
IPR000361FeS cluster biogenesisPFAMPF01521Fe-S_biosyncoord: 22..121
e-value: 9.6E-19
score: 67.6
IPR035903HesB-like domain superfamilyGENE3D2.60.300.12coord: 21..125
e-value: 4.2E-33
score: 115.5
IPR035903HesB-like domain superfamilySUPERFAMILY89360HesB-like domaincoord: 21..114
NoneNo IPR availablePANTHERPTHR10072IRON-SULFUR CLUSTER ASSEMBLY PROTEINcoord: 1..129
NoneNo IPR availablePANTHERPTHR10072:SF58coord: 1..129
IPR017870FeS cluster insertion, C-terminal, conserved sitePROSITEPS01152HESBcoord: 106..123

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_11356.1_ICC4958_v2 ID=Ca_11356.1_ICC4958_v2; Name=Ca_11356.1; organism=Cicer arietinum; type=mRNA; length=2850bp
GCGGCCCGACAAAGAAAGCAGAGAATAACATATATAACCTTTCGTGTTCA
AATGACTAAATTATCCTTACTGATATAAATGATCAACCATCATTCAATCT
CGGGCAATTTCGTAATTAACGATCAATGGGTTCCAAGGCGATGGCCATGG
CGGCGGAGAAGATAGGAACAGCGGTACGGCGTCAAGCCGTATCCTTAACC
GACGCAGCTGCATCTAGAATACGCTACTTGCTTCAGCAGCGTCAGAGACC
ATTTTTGAAGCTCGGCGTCAAGGCTCGTGGTTGTAACGGCTTAACTTACA
CCCTAAATTATGCAGGTATATTATTTTACATTAATTAATTGTAGTTTATT
GTTTTGAGGAATTAATTTTGGTTTGAAATAGGGAAAATGAATTTTAGACG
AACGGTTAATTTTGTGTGTTTTGTTGTAGCCAGAAATTTTTTCATGTGAG
ATGTATACTATGTGTTTGTTTGATTAGGTATTTATCTAATGTTGTCATGA
ACTTTTTTAGTTATGATAATCTGAATCAAGGTGAATTGGTGATTTTGAGT
TTGGTTATTTTTGTTATTAAATTGGTTGTTTGAATAAATTGCACTTTGAA
GTTTGTTAATTTAGATTTGACGGTGGTTTGACAGATGAAAAGGGGAAATT
TGATGAGTTGGTTGAGGATAAGGGTGTTAAGATATTGATTGATCCCAAGG
CGCTTATGCATGTTATTGGAACCAAGATGGATTTTGTTGATGATAAACTC
AGGTAGATGTTTCAATGAAATTCTTTTATGTTCCTCCTGTAATTTGTTTT
GTTTTAAAAATTTTATTTGTTGCAGTTTCTTTTAGCCTTCATACTGAATC
TGGGCAGAATATCTCAAAAATTGTTTGGGAAGGGATGAATTTACAAGAGA
AAATGGATCATGAGTGTAAACCAATTTTATATTGACATTTAATAACCACT
CTTGGGTCTATCCTCACACTCCATGATCGGTAATTGTCATCCTAAAATAA
CTAGCAAATCAATGGTTTATGTTGGCCTAAGTGTAAAACAGTTTATACCG
ACTGGGTATGCCCATTTAACCCAATTTCCAAATTGTTTTACCAGTTAGAT
TTTTAAACTATTTGTGACACAAAAAGTTAGATAATCCATTCCAAACACCG
TTTAGTTTTATTGCCTCATGAATCTTAATATCTTGTTAACAAGGTACAAT
TATCCTGTCGTTTGTTTAGATAGTTGTTAATGTTGTCTGAAATTGGAAAC
TGTTCTTGTTTTGAGGTTGAGCCGAACTTAGAATGTTAAACAAACCTAAT
TGCAATTTTGCATTGTTCATGTTCCCCGCAGGGGCATAACCAGCACTGAA
TAGTTATATTTGTTTTTGCTGTTATTTTGCTATTTGAGGGATGAAAATTG
TGATGAATAACACACACTGATGCTGTCGAACTTAGAAATCAAGAATAGTC
CCAGAGGTTTCAATGCAACCAGATACTCATTTGAATCTTTAGTTATCATT
TACTCATATATGTCCTCTTGCGACTGTTTTATGAGCACAGCAATAGTCGC
TTGATGCTTTTCAATAGTCAGAGGCAGGTGATACTCTTGGGAGGATAGAC
TAATTATGAAGTGTCTAAAGGCACAACAATAGTAAAAATCATGTATATGC
CACAGTCGTAGAAGAATAGCCACACATTTTGCTCGGTTGGATACTTCCAA
ATTGTGAATAGCCTCTGGAGGCTCATAGGTAGCTCTGACCTTGGTTTCCC
ATATTGTCTCATGTTGTTACTGTAGTTAATTTTTTCAATTCCCGTGCCCT
CCCACTTCTAAATTGTGAATAGCTCATGCTTATCTTTTTATAACTCTTAC
TCTAGTGTATATGAACTAGATATTATCTGCAATGGGAAAACTGCATGTTT
TTAAATAGAAACAGCACATTTTAGGCATTGATTAGCTTGACGCTGCAACT
TTTTCTCCCTCACCTACCTATGCTGAAGATGTATGAATTTGCACTTTCGG
GAATGGAATGATGATTTTTTTTTCCTTATGGGTATTGGATCATGCATTAT
TATAAAGGAAGCTTTTGATGAAATACTCATGAAATGTGGCATGAATATAA
CAGCCCGTATGCCATGCTTGGTTTTAGCCTCTTAGGAGTAAGTCTGTAAT
TTTGTTGCAATCCCAATTTTACATGGGTAAAAAATTCCACTTCACTAATT
TGCAGTAGTTACTGCTTGACCTCTGAGTTGAATCCTTCTGAGGCTGCTCT
GCCTCCACTATAGTATACCCCTTGTATATGAATGCCTAGTCCTCCCTTGC
AAAAGAGGGAAGATGTTGATGAATATTAGCATCAATATCAGTGTGGTTAC
ATTACATGTGCGTGATGCTGCTACTTGCTTCTGCTTTAAACTTTTCGGTG
CTAGTGTTTAAAATACTATTTCCCCTTTTCATGGCAGATCCGAGTTTGTT
TTCATCAATCCAAACTCTAAAGGCCAATGTGGTTGTGGTGAATCTTTCAT
GACAACGCCAAGTACTGGAGGTGCTAAGCAAGGAAATGGTTGAAATTGTC
ATTTAACTCAGCGTTGATGATCCACATTTACACATGAAGTCTTCCTTTCA
TGATTGCATTGTTGAACATGCAAATACACCACAATTGGATTTTCTGTAAT
TTTTTTTACAAAAGCAGAGGAAAATAAAAGCTTTTGCATACTGACAGTGA
CATGGTTTCACTATACAGAGTTCTCTAAAGCTGATGCTGACAAGGCTTAA
GACAACAACCTGTACTAGCATATCATTTGATCAGATTATTTTTATTTCAT
GTAAAAAAATTTGTATTATGAAAACTGTATAATTTGTAGGTTAAGAAATC
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protein sequence of Ca_11356.1_ICC4958_v2

>Ca_11356.1_ICC4958_v2 ID=Ca_11356.1_ICC4958_v2; Name=Ca_11356.1_ICC4958_v2; organism=Cicer arietinum; type=polypeptide; length=137bp
MGSKAMAMAAEKIGTAVRRQAVSLTDAAASRIRYLLQQRQRPFLKLGVKA
RGCNGLTYTLNYADEKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDD
KLRSEFVFINPNSKGQCGCGESFMTTPSTGGAKQGNG
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mRNA from alignment at Ca_LG_4:44736600..44739449+

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_11356.1_ICC4958_v2 ID=Ca_11356.1_ICC4958_v2; Name=Ca_11356.1; organism=Cicer arietinum; type=mRNA; length=2850bp; location=Sequence derived from: Ca_LG_4:44736600..44739449+ (Cicer arietinum
GCGGCCCGACAAAGAAAGCAGAGAATAACATATATAACCTTTCGTGTTCA
AATGACTAAATTATCCTTACTGATATAAATGATCAACCATCATTCAATCT
CGGGCAATTTCGTAATTAACGATCAATGGGTTCCAAGGCGATGGCCATGG
CGGCGGAGAAGATAGGAACAGCGGTACGGCGTCAAGCCGTATCCTTAACC
GACGCAGCTGCATCTAGAATACGCTACTTGCTTCAGCAGCGTCAGAGACC
ATTTTTGAAGCTCGGCGTCAAGGCTCGTGGTTGTAACGGCTTAACTTACA
CCCTAAATTATGCAGGTATATTATTTTACATTAATTAATTGTAGTTTATT
GTTTTGAGGAATTAATTTTGGTTTGAAATAGGGAAAATGAATTTTAGACG
AACGGTTAATTTTGTGTGTTTTGTTGTAGCCAGAAATTTTTTCATGTGAG
ATGTATACTATGTGTTTGTTTGATTAGGTATTTATCTAATGTTGTCATGA
ACTTTTTTAGTTATGATAATCTGAATCAAGGTGAATTGGTGATTTTGAGT
TTGGTTATTTTTGTTATTAAATTGGTTGTTTGAATAAATTGCACTTTGAA
GTTTGTTAATTTAGATTTGACGGTGGTTTGACAGATGAAAAGGGGAAATT
TGATGAGTTGGTTGAGGATAAGGGTGTTAAGATATTGATTGATCCCAAGG
CGCTTATGCATGTTATTGGAACCAAGATGGATTTTGTTGATGATAAACTC
AGGTAGATGTTTCAATGAAATTCTTTTATGTTCCTCCTGTAATTTGTTTT
GTTTTAAAAATTTTATTTGTTGCAGTTTCTTTTAGCCTTCATACTGAATC
TGGGCAGAATATCTCAAAAATTGTTTGGGAAGGGATGAATTTACAAGAGA
AAATGGATCATGAGTGTAAACCAATTTTATATTGACATTTAATAACCACT
CTTGGGTCTATCCTCACACTCCATGATCGGTAATTGTCATCCTAAAATAA
CTAGCAAATCAATGGTTTATGTTGGCCTAAGTGTAAAACAGTTTATACCG
ACTGGGTATGCCCATTTAACCCAATTTCCAAATTGTTTTACCAGTTAGAT
TTTTAAACTATTTGTGACACAAAAAGTTAGATAATCCATTCCAAACACCG
TTTAGTTTTATTGCCTCATGAATCTTAATATCTTGTTAACAAGGTACAAT
TATCCTGTCGTTTGTTTAGATAGTTGTTAATGTTGTCTGAAATTGGAAAC
TGTTCTTGTTTTGAGGTTGAGCCGAACTTAGAATGTTAAACAAACCTAAT
TGCAATTTTGCATTGTTCATGTTCCCCGCAGGGGCATAACCAGCACTGAA
TAGTTATATTTGTTTTTGCTGTTATTTTGCTATTTGAGGGATGAAAATTG
TGATGAATAACACACACTGATGCTGTCGAACTTAGAAATCAAGAATAGTC
CCAGAGGTTTCAATGCAACCAGATACTCATTTGAATCTTTAGTTATCATT
TACTCATATATGTCCTCTTGCGACTGTTTTATGAGCACAGCAATAGTCGC
TTGATGCTTTTCAATAGTCAGAGGCAGGTGATACTCTTGGGAGGATAGAC
TAATTATGAAGTGTCTAAAGGCACAACAATAGTAAAAATCATGTATATGC
CACAGTCGTAGAAGAATAGCCACACATTTTGCTCGGTTGGATACTTCCAA
ATTGTGAATAGCCTCTGGAGGCTCATAGGTAGCTCTGACCTTGGTTTCCC
ATATTGTCTCATGTTGTTACTGTAGTTAATTTTTTCAATTCCCGTGCCCT
CCCACTTCTAAATTGTGAATAGCTCATGCTTATCTTTTTATAACTCTTAC
TCTAGTGTATATGAACTAGATATTATCTGCAATGGGAAAACTGCATGTTT
TTAAATAGAAACAGCACATTTTAGGCATTGATTAGCTTGACGCTGCAACT
TTTTCTCCCTCACCTACCTATGCTGAAGATGTATGAATTTGCACTTTCGG
GAATGGAATGATGATTTTTTTTTCCTTATGGGTATTGGATCATGCATTAT
TATAAAGGAAGCTTTTGATGAAATACTCATGAAATGTGGCATGAATATAA
CAGCCCGTATGCCATGCTTGGTTTTAGCCTCTTAGGAGTAAGTCTGTAAT
TTTGTTGCAATCCCAATTTTACATGGGTAAAAAATTCCACTTCACTAATT
TGCAGTAGTTACTGCTTGACCTCTGAGTTGAATCCTTCTGAGGCTGCTCT
GCCTCCACTATAGTATACCCCTTGTATATGAATGCCTAGTCCTCCCTTGC
AAAAGAGGGAAGATGTTGATGAATATTAGCATCAATATCAGTGTGGTTAC
ATTACATGTGCGTGATGCTGCTACTTGCTTCTGCTTTAAACTTTTCGGTG
CTAGTGTTTAAAATACTATTTCCCCTTTTCATGGCAGATCCGAGTTTGTT
TTCATCAATCCAAACTCTAAAGGCCAATGTGGTTGTGGTGAATCTTTCAT
GACAACGCCAAGTACTGGAGGTGCTAAGCAAGGAAATGGTTGAAATTGTC
ATTTAACTCAGCGTTGATGATCCACATTTACACATGAAGTCTTCCTTTCA
TGATTGCATTGTTGAACATGCAAATACACCACAATTGGATTTTCTGTAAT
TTTTTTTACAAAAGCAGAGGAAAATAAAAGCTTTTGCATACTGACAGTGA
CATGGTTTCACTATACAGAGTTCTCTAAAGCTGATGCTGACAAGGCTTAA
GACAACAACCTGTACTAGCATATCATTTGATCAGATTATTTTTATTTCAT
GTAAAAAAATTTGTATTATGAAAACTGTATAATTTGTAGGTTAAGAAATC
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Coding sequence (CDS) from alignment at Ca_LG_4:44736600..44739449+

>Ca_11356.1_ICC4958_v2 ID=Ca_11356.1_ICC4958_v2; Name=Ca_11356.1; organism=Cicer arietinum; type=CDS; length=414bp; location=Sequence derived from: Ca_LG_4:44736600..44739449+ (Cicer arietinum
ATGGGTTCCAAGGCGATGGCCATGGCGGCGGAGAAGATAGGAACAGCGGT
ACGGCGTCAAGCCGTATCCTTAACCGACGCAGCTGCATCTAGAATACGCT
ACTTGCTTCAGCAGCGTCAGAGACCATTTTTGAAGCTCGGCGTCAAGGCT
CGTGGTTGTAACGGCTTAACTTACACCCTAAATTATGCAGATGAAAAGGG
GAAATTTGATGAGTTGGTTGAGGATAAGGGTGTTAAGATATTGATTGATC
CCAAGGCGCTTATGCATGTTATTGGAACCAAGATGGATTTTGTTGATGAT
AAACTCAGATCCGAGTTTGTTTTCATCAATCCAAACTCTAAAGGCCAATG
TGGTTGTGGTGAATCTTTCATGACAACGCCAAGTACTGGAGGTGCTAAGC
AAGGAAATGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR016092FeS_cluster_insertion
IPR000361FeS_biogenesis
IPR035903HesB-like_dom_sf
IPR017870FeS_cluster_insertion_CS
Vocabulary: Molecular Function
TermDefinition
GO:0051536iron-sulfur cluster binding
GO:0005198structural molecule activity
Vocabulary: Biological Process
TermDefinition
GO:0097428protein maturation by iron-sulfur cluster transfer