Cicer arietinum - NCBI SRA datasets

RNA Datasets (as of 03/12/19)

Organism Name	Study Accession	Cultivar	Instrument	Reference
Cicer arietinum	SRP115250		Illumina HiSeq 2500	Unpublished, ICRISAT
Cicer arietinum	SRP072564	Himchana	Illumina HiSeq 2000	Unpublished, Jawaharlal Nehru U
Cicer arietinum	SRP072563	JGK3	Illumina HiSeq 2000	Unpublished, Jawaharlal Nehru U
Cicer arietinum	SRP068490	ICC4958	Illumina Genome Analyzer IIx	Unpublished, NIPGR
Cicer arietinum	SRP084227		Ion Torrent PGM	Upasani et al, 2017
Cicer arietinum	SRP078184		Illumina HiSeq 2000	Pandey et al, 2017
Cicer arietinum	SRP076079		Illumina Genome Analyzer IIx	Unpublished, NIPGR
Cicer arietinum	SRP062733		454 GS FLX Titanium	Unpublished, NBRI
Cicer arietinum	DRP003545		Ion Torrent Proton	Unpublished, RIKEN
Cicer arietinum	SRP067982	ICC1205 ICC5434	Illumina HiSeq 2000	Unpublished, ICAR
Cicer arietinum	SRP066464	WR315 BG256	454 GS FLX Titanium	Unpublished, ICAR
Cicer arietinum	SRP062857	JG62 K850 WR315	Illumina HiSeq 2000	Jain et al, 2015
Cicer arietinum	SRP061674	JG62/WR315	Ion Torrent PGM	Unpublished, Junagadh Ag U
Cicer arietinum	SRP059951		Illumina HiSeq 2000	Garg et al, 2016
Cicer arietinum	SRP059919		Illumina HiSeq 2000	Garg et al, 2016
Cicer arietinum	SRP049984	"Red of Ruvo”	Illumina HiSeq 2500	Pirovano et al, 2015
Cicer arietinum	SRP049935		454 GS FLX Titanium	Unpublished, NIPGR
Cicer arietinum	SRP048805		Illumina Genome Analyzer II	Srivastava et al, 2015
Cicer arietinum	SRP045172	ICC2580	Ion Torrent PGM	Unpublished, Junagadh Ag U
Cicer arietinum	SRP044343	CDC Frontier Amit CDC Xena ICC 12512-1 Y9563-28 ICCV 96029	454 GS FLX Titanium	Deokar et al, 2014
Cicer arietinum	SRP042145	ICC4958	Illumina Genome Analyzer IIx	Kohli et al, 2014
Cicer arietinum	SRP041784	WR315 JG62	Illumina HiSeq 1000	Unpublished, Bose Institute
Cicer arietinum	SRP034839	ICC4958	Illumina Genome Analyzer IIx	Garg et al, 2015
Cicer arietinum	SRP030647	ICC4958	Illumina Genome Analyzer IIx	Jain et al, 2014
Cicer arietinum	SRP017394	ICC4958	Illumina Genome Analyzer IIx	Singh et al, 2013
Cicer arietinum	SRP028391	BG-256	454 GS FLX Titanium	Gupta et al, 2015
Cicer arietinum	SRP007007	PI489777	454 GS FLX Titanium	Jhanwar et al, 2012
Cicer arietinum	SRP006039	ICC4958	454 GS FLX Titanium	Garg et al, 2011
Cicer arietinum	SRP012503	ICCV2	Illumina Genome Analyzer IIx	Agarwal et al, 2012
Cicer arietinum	SRP012503	ICCV2	454 GS FLX Titanium	Agarwal et al, 2012
Cicer arietinum	SRP011194	ICCV2	454 GS FLX Titanium	Pradhan et al, 2014
Cicer arietinum	SRP003236	ICC4958	Illumina Genome Analyzer II	Garg et al, 2011
Cicer arietinum	SRP006045	PI489777 ICCC37 ICC506 ICC4958	Illumina Genome Analyzer II	Hiremath et al, 2011
Cicer arietinum	SRP080728		Illumina HiSeq 2000	Unpublished, NBRI
Cicer arietinum	SRP103561		Illumina HiSeq 2500	Unpublished, ICAR
Cicer arietinum	SRP116916		Illumina HiSeq 2000	Bhatia et al., 2018
Cicer arietinum	SRP119439	ICC8261	Illumina HiSeq 2000	Badhan et al., 2018
Cicer arietinum	SRP121085		Illumina HiSeq 2000	Unpublished, ICRISAT
Cicer arietinum	SRP132178	JG11	Ion Torrent PGM	Kaashyap et al., 2018
Cicer arietinum	SRP136396	Savur 063 Kalkan 064	Illumina HiSeq 4000	Unpublished, UC Davis

DNA Datasets (as of 03/12/19)

Organism Name	Study Accession	Cultivar	Instrument	Reference
Cicer arietinum	SRP084300		Illumina HiSeq 2000	Thudi et al, 2016
Cicer arietinum	SRP108383		Illumina HiSeq 4000	Plekhanova et al, 2017
Cicer arietinum	SRP113792	PK1880K	Illumina HiSeq 4000	Sani et al, 2018
Cicer arietinum	SRP100678	AB001	Illumina HiSeq 2000	Li et al, 2017
Cicer arietinum	SRP073357		Illumina HiSeq 2000	Unpublished, Cornell U
Cicer arietinum	SRP093051	CDC Frontier ICC4958	Illumina Genome Analyzer II	Ruperao et al, 2014
Cicer arietinum	SRP065750		Illumina HiSeq 2000	Ruperao et al, 2014
Cicer arietinum	SRP058153	SBD377 x BGD112 population	Illumina HiSeq 2000	Unpublished, NIPGR
Cicer arietinum	SRP055744	PI489777 x ICC4958 RILs	Illumina Genome Analyzer II	Unpublished, U of Queensland
Cicer arietinum	SRP052513		Illumina HiSeq 2000	Kujur et al, 2015
Cicer arietinum	SRP044316	ICCV 96029 CDC Frontier ICCV 96029 X CDC Frontier_RIL	Illumina HiSeq 2000	Deokar et al, 2014
Cicer arietinum	SRP013365	ICC4958	454 GS FLX Titanium Illumina Genome Analyzer IIx	Parween et al, 2015
Cicer arietinum	SRP003330		454 GS FLX	Unpublished, J. Craig Venter Institute
Cicer arietinum	SRP096939	ICC10018	Illumina HiSeq 2000	Unpublished, ICRISAT
Cicer arietinum	SRP116947	ICC4958 PI489777	Illumina HiSeq 2000	Bhatia et al., 2018
Cicer arietinum	SRP159758	ILC3279 WR315	Ion Torrent Proton	Unpublished, IFAPA
Cicer arietinum	SRP171104		Illumina HiSeq 4000	Unpublished, UC Davis
Cicer arietinum	SRP171317		Illumina HiSeq 4000	Unpublished, UC Davis
Cicer arietinum	SRP171746		PacBio RS II	Unpublished, UC Davis

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Cicer arietinum - NCBI SRA datasets