PulseDB

Trait Overview

Descriptors

QTLs/MTLs

Dataset

Publications

Trait Overview

Trait	Pod shattering
Trait Category	Agronomic; Plant growth and development trait
Abbreviation	PDSH
Definition	Occurrence of pod shattering
Descriptors	[view all 8]
QTLs	[view all 22]

Descriptors

Group	Descriptor
pulse_trait_descriptor	Rate of shattered pods - 1 week
pulse_trait_descriptor	Rate of shattered pods - 2 weeks
pulse_trait_descriptor	Rate of shattered pods - 4 weeks
GRIN_LENTIL	Pod shatter - yes/no
GRIN_LENTIL	Pod shatter - coded
GRIN_LUPIN	Pod Shattering
GRIN_PHASEOLUS	Pod shatter
GRIN_VETCH	Pod shatter

QTLs

Download Table

QTL/MTL	Linkage Group	Peak	Start	Stop	Dataset	MapViewer
qPDSH.JP211874/JP229096.LG1.1	LG1	41.4	-	-	mungbean-Domestication_related_traits-Isemura-2012	View
qPDSH.JP211874/JP229096.LG1.2	LG1	41.6	-	-	mungbean-Domestication_related_traits-Isemura-2012	View
qPDSH.JP211874/JP229096.LG1.3	LG1	47.7	-	-	mungbean-Domestication_related_traits-Isemura-2012	View
qPDSH.JP211874/JP229096.LG6.1	LG6	23.6	-	-	mungbean-Domestication_related_traits-Isemura-2012	View
qPDSH.JP211874/JP229096.LG6.2	LG6	22.5	-	-	mungbean-Domestication_related_traits-Isemura-2012	View
qPDSH.JP211874/JP229096.LG6.3	LG6	22.8	-	-	mungbean-Domestication_related_traits-Isemura-2012	View
qPDSH.JP211874/JP229096.LG7.1	LG7	15.7	-	-	mungbean-Domestication_related_traits-Isemura-2012	View
qPDSH.JP211874/JP229096.LG7.2	LG7	16.2	-	-	mungbean-Domestication_related_traits-Isemura-2012	View
qPDSH.JP211874/JP229096.LG7.3	LG7	18.1	-	-	mungbean-Domestication_related_traits-Isemura-2012	View
qPDSH.TN67/ICPMO_056.LG01.F2	LG01	88	-	-	Vigna-Domestication-Yundaeng-2019	View
qPDSH.TN67/ICPMO_056.LG01.F2.2	LG01	126	-	-	Vigna-Domestication-Yundaeng-2019	View
qPDSH.TN67/ICPMO_056.LG01.F2:3	LG01	89	-	-	Vigna-Domestication-Yundaeng-2019	View
qPDSH.TN67/ICPMO_056.LG07.F2	LG07	6	-	-	Vigna-Domestication-Yundaeng-2019	View
qPDSH.TN67/ICPMO_056.LG07.F2:3	LG07	4	-	-	Vigna-Domestication-Yundaeng-2019	View
reduced pod shattering-Lentus	LG08	-	38.7	-	na	View
reduced pod shattering-Tardus	LG01	-	130.7	-	na	View
GWAS0000572	-	-	-	-	Bean-Seed_quality-Ugwuanyi-2022	View
GWAS0000573	-	-	-	-	Bean-Seed_quality-Ugwuanyi-2022	View
GWAS0000574	-	-	-	-	Bean-Seed_quality-Ugwuanyi-2022	View
GWAS0000575	-	-	-	-	Bean-Seed_quality-Ugwuanyi-2022	View
GWAS0000576	-	-	-	-	Bean-Seed_quality-Ugwuanyi-2022	View
GWAS0000577	-	-	-	-	Bean-Seed_quality-Ugwuanyi-2022	View


Dataset	Type
LUPIN.CALIFORNIA.00.JENDEREK	phenotype
VETCH.2008.PULLMAN	phenotype
VETCH.2010.PULLMAN	phenotype
LENTIL.2001.PULLMAN	phenotype
LENTIL.2010.PULLMAN.LSP	phenotype
LENTIL.2010.PULLMAN.LSP.GH	phenotype
LENTIL.2012.PULLMAN.LSP	phenotype
LENTIL.2013.PULLMAN.LSP	phenotype
LENTIL.2014.PULLMAN.LSP	phenotype
LENTIL.2016.PULLMAN	phenotype
LENTIL.2017.PULLMAN	phenotype
LENTIL.2017.PULLMAN.LSP	phenotype
PHASEOLUS.PODSHATTER.GH.WRPIS	phenotype
mungbean-Domestication_related_traits-Isemura-2012	QTL


Year	Publication
2022	Ugwuanyi S, Udengwu OS, Snowdon RJ, Obermeier C. Novel candidate loci for morpho-agronomic and seed quality traits detected by targeted genotyping-by-sequencing in common bean.. Frontiers in plant science. 2022; 13:1014282.
2019	Yundaeng C, Somta P, Amkul K, Kongjaimun A, Kaga A, Tomooka N. Construction of genetic linkage map and genome dissection of domestication-related traits of moth bean (Vigna aconitifolia), a legume crop of arid area. Molecular Genetics and Genomics. 2019; 294:621-635.
2014	Kroc M, Koczyk G, Święcicki W, Kilian A, Nelson MN. New evidence of ancestral polyploidy in the Genistoid legume Lupinus angustifolius L. (narrow-leafed lupin). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2014 May; 127(5):1237-49.
2012	Isemura T, Kaga A, Tabata S, Somta P, Srinives P, Shimizu T, Jo U, Vaughan DA, Tomooka N. Construction of a genetic linkage map and genetic analysis of domestication related traits in mungbean (Vigna radiata). PloS one. 2012; 7(8):e41304.

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