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Marker Overview
| Name | Vu_UCR09-1_0323 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | G |
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| 5' Flanking Sequence | CGGCTTTCTTCTTCGTCTCACAGTGGGAGTAGCAGGAGCGCCTACTCACTTAATTGCCCT
AAGTTAAGAAATGGCTCTGATCCTGCACGCACCCAAAAGAAACAAAAATGTTTACAAGAC
TCTCATCGCAGCAGAGTACAGTGGTGTCCAACTGGAATTTGCCGATTTCGAAATATCTGT
TTCCAACAAATCTCCTGAGTTCCTCAAAATGAATCCTCTTGGAAAGACTCCTGTGTTGGA
AACACCCGATGGTGCAGTCTTCGAAAGCAATGCTATTGCTCGCTACGTTGCTCGACTCAA
CGGTGACAATGCATTGTTCCTGTCTACTCCCATTGATAACGCCCGCATCGACCAGTGGAT
TGATTTTGCAACTTTGGAGATCGATACTAATATCCTCAAATGGTACATACCCAGACTTGG
ATTCGCTCCATACCTTCCACCAGTCGAGGAGGCTGCAAATTCTGCGTTGAAGAGAGCATT
CGGTGCCTTGAACACTCACCTTGCATCCAATACGTATCTGGTTGGTCATTCCGTCACCCT
TGCCGACATCATAATGACATGCAACCTGTATTTGGGTTTCACCCAGCTCTTAGTTAAGAG
CTTCACCTCGGAGTTCCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAACCAGCCCAA
CTTCCGCAAGATATTAGGCCAGATTAAGCAAACGGACGCCGTTCCACCTGTTCCATCTGC
CAAGAAGCCTTCCCAGCCTAAGGAGTCGAAGCCCAAACCTAAGGATGAGCCGAAGAAAGT
GGCTAAGCCAGAGCCAGAGAAGCCCAAGGAAGAGGCAGAGGAGGAGGCACCCAAGCCCAA
GCCCAAAAATCCTCTTGATCTTCTTCCTCCAAGCAAGATGATATTGGATGAGTGGAAAAG
ACTCTATTCAAACACCAAGACCAACTTCCGCGAGGTTGCAATCAAAGGATTTTGGGACAT
GTATGATCCAGAGGGTTATTCTCTCTGGTTCTGTGATTACAAATACAACGACGAGAACAC
TGTTTCCTTTGTGACATTAAACAAGGTTGGTGGTTTTCTTCAACGGATGGATCTGGCTCG
CAAGTATGCTTTTGGAAAGATGCTTGTGATTGGATCACAGGCACCATTTAAGGTTAAGGG
GTTGTGGCTTTTCCGCGGGCAAGAGATTCCGCAATTTGTGATTGACGAGTGCTATGATAT
GGAGCTGTACGAGTGGACCAAGGTTGACATCTCTGACGAAACTCAGAAAGAGCGGGTGAG
TCAGATGATTGAGGATTATGAGCCATTTGAGGGAGAGCCTCTTCTGGATGCCAAGTGCTT
CAAGTGAAAATTATTGCGTAGTCTTACAAAAACCTATGATTTTGTTGCGCCTTTTGTTAA
GAGTT |
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| 3' Flanking Sequence | GTTTCTATTTTTTTGCCTGTTATAGTGAGTTCTTAGCTGTTTTGTTTTGGTGATTTTGTC
AGCGTTGAAACTTTTACAAGGTTGATTTTGGTATACGTTCATTTTGTTTACTTTAGCAAG
ACTAGTACACAAATTTATTTATCTGTGAAGACGTCAATGCGTACGTATGAAATTTATTAG
GCCTATCATAAAAAAAAAAAAAAAAAAATTGTTTGTTATTGTAGAGAAGACTGCTTATAA
ATACCGCAGAGGTCAGATTTTATAATGTATTTTTGTTTTGGAAACTATTTTTCAAAAAAA
TAAATATTTTAAAGCTTAAAAAAAAAAAAAAA |
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| Species | Vigna unguiculata |
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| Publication | [view all] |
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| Contact | Timothy Close
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Publications
| Year | Publication |
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| 2009 | Muchero W, Diop NN, Bhat PR, Fenton RD, Wanamaker S, Pottorff M, Hearne S, Cisse N, Fatokun C, Ehlers JD, Roberts PA, Close TJ. A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs. Proceedings of the National Academy of Sciences of the United States of America. 2009 Oct 27; 106(43):18159-64. |
Sequence
>Vu_UCR09-1_0323 ID=Vu_UCR09-1_0323; Name=Vu_UCR09-1_0323; organism=Vigna unguiculata; type=genetic_marker; length=1720bp
CGGCTTTCTTCTTCGTCTCACAGTGGGAGTAGCAGGAGCGCCTACTCACT
TAATTGCCCTAAGTTAAGAAATGGCTCTGATCCTGCACGCACCCAAAAGA
AACAAAAATGTTTACAAGACTCTCATCGCAGCAGAGTACAGTGGTGTCCA
ACTGGAATTTGCCGATTTCGAAATATCTGTTTCCAACAAATCTCCTGAGT
TCCTCAAAATGAATCCTCTTGGAAAGACTCCTGTGTTGGAAACACCCGAT
GGTGCAGTCTTCGAAAGCAATGCTATTGCTCGCTACGTTGCTCGACTCAA
CGGTGACAATGCATTGTTCCTGTCTACTCCCATTGATAACGCCCGCATCG
ACCAGTGGATTGATTTTGCAACTTTGGAGATCGATACTAATATCCTCAAA
TGGTACATACCCAGACTTGGATTCGCTCCATACCTTCCACCAGTCGAGGA
GGCTGCAAATTCTGCGTTGAAGAGAGCATTCGGTGCCTTGAACACTCACC
TTGCATCCAATACGTATCTGGTTGGTCATTCCGTCACCCTTGCCGACATC
ATAATGACATGCAACCTGTATTTGGGTTTCACCCAGCTCTTAGTTAAGAG
CTTCACCTCGGAGTTCCCTCATGTTGAGAGATACTTTTGGACCTTGGTCA
ACCAGCCCAACTTCCGCAAGATATTAGGCCAGATTAAGCAAACGGACGCC
GTTCCACCTGTTCCATCTGCCAAGAAGCCTTCCCAGCCTAAGGAGTCGAA
GCCCAAACCTAAGGATGAGCCGAAGAAAGTGGCTAAGCCAGAGCCAGAGA
AGCCCAAGGAAGAGGCAGAGGAGGAGGCACCCAAGCCCAAGCCCAAAAAT
CCTCTTGATCTTCTTCCTCCAAGCAAGATGATATTGGATGAGTGGAAAAG
ACTCTATTCAAACACCAAGACCAACTTCCGCGAGGTTGCAATCAAAGGAT
TTTGGGACATGTATGATCCAGAGGGTTATTCTCTCTGGTTCTGTGATTAC
AAATACAACGACGAGAACACTGTTTCCTTTGTGACATTAAACAAGGTTGG
TGGTTTTCTTCAACGGATGGATCTGGCTCGCAAGTATGCTTTTGGAAAGA
TGCTTGTGATTGGATCACAGGCACCATTTAAGGTTAAGGGGTTGTGGCTT
TTCCGCGGGCAAGAGATTCCGCAATTTGTGATTGACGAGTGCTATGATAT
GGAGCTGTACGAGTGGACCAAGGTTGACATCTCTGACGAAACTCAGAAAG
AGCGGGTGAGTCAGATGATTGAGGATTATGAGCCATTTGAGGGAGAGCCT
CTTCTGGATGCCAAGTGCTTCAAGTGAAAATTATTGCGTAGTCTTACAAA
AACCTATGATTTTGTTGCGCCTTTTGTTAAGAGTT[G]GTTTCTATTTTT
TTGCCTGTTATAGTGAGTTCTTAGCTGTTTTGTTTTGGTGATTTTGTCAG
CGTTGAAACTTTTACAAGGTTGATTTTGGTATACGTTCATTTTGTTTACT
TTAGCAAGACTAGTACACAAATTTATTTATCTGTGAAGACGTCAATGCGT
ACGTATGAAATTTATTAGGCCTATCATAAAAAAAAAAAAAAAAAAATTGT
TTGTTATTGTAGAGAAGACTGCTTATAAATACCGCAGAGGTCAGATTTTA
TAATGTATTTTTGTTTTGGAAACTATTTTTCAAAAAAATAAATATTTTAA
AGCTTAAAAAAAAAAAAAAA
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