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Genome Overview
Analysis Name | Vigna angularis cv. Jingnong6 genome v1.7.1 |
Method | PacBio Sequel, BGI DNBSEQ (Assembled with CANU 1.7.1, BWA-EM 0.7.17, PILON 1.22) |
Source | CNA0139807 |
Date performed | 2024-05-08 |
The genome of Jingnong6 was sequenced and assembled as outlined in Chu L, Yang K, Chen C, Zhao B, Hou Y, Wang W, Zhao P, Wang K, Wang B, Xiao Y, Li Y, Li Y, Song Q, Liu B, Fan R, Bohra A, Yu J, Sonnenschein EC, Varshney RK, Tian Z, Jian J, Wan P. Chromosome-level reference genome and resequencing of 322 accessions reveal evolution, genomic imprint and key agronomic traits in adzuki bean. Plant biotechnology journal. 2024 Mar 18.
About the assembly:
Number of scaffolds |
346 |
Total size |
489 Mb |
N50 |
43,272,725 bp |
Assembly BUSCO score (embryophyta_odb10) |
98.3% |
Annotation BUSCO score (embryophyta_odb10) |
84.3% |
Functional Analysis
Functional annotation files for the Vigna angularis cv. Jingnong6 genome v1.7.1 are available for download below. The V. angularis cv. Jingnong6 genome v1.7.1 proteins were analyzed using InterProScan in order to assign InterPro domains and Gene Ontology (GO) terms. Pathways analysis was performed using the KEGG Automatic Annotation Server (KAAS).
Downloads
Assembly
The Vigna angularis cv. Jingnong6 genome v1.7.1 assembly files are available in GFF3 and FASTA format.
Downloads
Chromosomes and scaffolds (FASTA file) |
V.angularis_Jingnong6.v1.7.1.fasta.gz |
Gene Prediction
The Vigna angularis cv. Jingnong6 genome v1.7.1 gene prediction files are available in GFF3 and FASTA format.
Downloads
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