Cicer_arietinum_v1_Contig1693
Contig Overview
Alignments
The following features are aligned
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
Homology
BLAST of Cicer_arietinum_v1_Contig1693 vs. TrEMBL
Match: D7UCV2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_46.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027169001 PE=4 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.357e-19 Identity = 47/63 (74.60%), Postives = 56/63 (88.89%), Query Frame = 3 Query: 69 MAIMERLRMLVAQEPVLAASCLIAGFGLFLPAFVRPMLDSYQTTKQPPQPALSDVVAGMTGKK 257 M ++E+L+ML+ QEPV+AASC IAG GLFLPA VRP+LDS +T+KQ PQPALSDVVAGMTGKK Sbjct: 1 MPVVEKLKMLIVQEPVVAASCFIAGVGLFLPAVVRPILDSLETSKQVPQPALSDVVAGMTGKK 63
BLAST of Cicer_arietinum_v1_Contig1693 vs. TrEMBL
Match: Q8GT82_GOSBA (Fiber protein Fb11 OS=Gossypium barbadense PE=4 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.023e-19 Identity = 46/63 (73.02%), Postives = 57/63 (90.48%), Query Frame = 3 Query: 69 MAIMERLRMLVAQEPVLAASCLIAGFGLFLPAFVRPMLDSYQTTKQPPQPALSDVVAGMTGKK 257 MA+M++L++ V QEPV+AASCLIAGFGLFLPA VRP+LDS +++KQ PQPAL DVVAG+TGKK Sbjct: 1 MAVMQKLKIFVVQEPVVAASCLIAGFGLFLPAVVRPILDSLESSKQVPQPALRDVVAGVTGKK 63
BLAST of Cicer_arietinum_v1_Contig1693 vs. TrEMBL
Match: B4FKL9_MAIZE (Fiber protein Fb11 OS=Zea mays PE=4 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.149e-18 Identity = 45/63 (71.43%), Postives = 56/63 (88.89%), Query Frame = 3 Query: 69 MAIMERLRMLVAQEPVLAASCLIAGFGLFLPAFVRPMLDSYQTTKQPPQPALSDVVAGMTGKK 257 MA+ME+L++ V +EPV+AASCLIAGFGLFLPA VRP+LDS+QT +Q P P L+DVVAG+TGKK Sbjct: 1 MAVMEKLKIFVVKEPVVAASCLIAGFGLFLPAVVRPILDSWQTAEQVPPPLLNDVVAGVTGKK 63
BLAST of Cicer_arietinum_v1_Contig1693 vs. TrEMBL
Match: Q5TKP1_ORYSJ (Os05g0542100 protein OS=Oryza sativa subsp. japonica GN=OJ1362_G11.16 PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.959e-18 Identity = 44/63 (69.84%), Postives = 54/63 (85.71%), Query Frame = 3 Query: 69 MAIMERLRMLVAQEPVLAASCLIAGFGLFLPAFVRPMLDSYQTTKQPPQPALSDVVAGMTGKK 257 M +ME+L++ +EPV+ ASCLIAGFGLFLPA VRPMLDS++T KQ P PAL+DVVAG+TGKK Sbjct: 1 MGVMEKLKIFAVKEPVVTASCLIAGFGLFLPAVVRPMLDSWETAKQVPPPALNDVVAGVTGKK 63
BLAST of Cicer_arietinum_v1_Contig1693 vs. TrEMBL
Match: B8AW76_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20832 PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.959e-18 Identity = 44/63 (69.84%), Postives = 54/63 (85.71%), Query Frame = 3 Query: 69 MAIMERLRMLVAQEPVLAASCLIAGFGLFLPAFVRPMLDSYQTTKQPPQPALSDVVAGMTGKK 257 M +ME+L++ +EPV+ ASCLIAGFGLFLPA VRPMLDS++T KQ P PAL+DVVAG+TGKK Sbjct: 1 MGVMEKLKIFAVKEPVVTASCLIAGFGLFLPAVVRPMLDSWETAKQVPPPALNDVVAGVTGKK 63
BLAST of Cicer_arietinum_v1_Contig1693 vs. TrEMBL
Match: C5YUV8_SORBI (Putative uncharacterized protein Sb09g027070 OS=Sorghum bicolor GN=Sb09g027070 PE=4 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.445e-18 Identity = 43/63 (68.25%), Postives = 56/63 (88.89%), Query Frame = 3 Query: 69 MAIMERLRMLVAQEPVLAASCLIAGFGLFLPAFVRPMLDSYQTTKQPPQPALSDVVAGMTGKK 257 MA+ME+L++ V +EPV+AASCLIAGFGLFLPA VRP+LDS++T ++ P P L+DVVAG+TGKK Sbjct: 1 MAVMEKLKIFVVKEPVVAASCLIAGFGLFLPAVVRPILDSWETAEKVPPPPLNDVVAGVTGKK 63
BLAST of Cicer_arietinum_v1_Contig1693 vs. TrEMBL
Match: B6SNA3_MAIZE (Fiber protein Fb11 OS=Zea mays PE=4 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.445e-18 Identity = 43/63 (68.25%), Postives = 56/63 (88.89%), Query Frame = 3 Query: 69 MAIMERLRMLVAQEPVLAASCLIAGFGLFLPAFVRPMLDSYQTTKQPPQPALSDVVAGMTGKK 257 MA+ME+L++ V +EPV+AASCLIAGFGLFLPA VRP+LDS++T ++ P P L+DVVAG+TGKK Sbjct: 1 MAVMEKLKIFVVKEPVVAASCLIAGFGLFLPAVVRPILDSWETAEKVPPPPLNDVVAGVTGKK 63
BLAST of Cicer_arietinum_v1_Contig1693 vs. TrEMBL
Match: D7LEK7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483814 PE=4 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.302e-17 Identity = 44/63 (69.84%), Postives = 52/63 (82.54%), Query Frame = 3 Query: 69 MAIMERLRMLVAQEPVLAASCLIAGFGLFLPAFVRPMLDSYQTTKQPPQPALSDVVAGMTGKK 257 M IME+LRM VAQEPV+AASCLI G GLFLPA VRP+LDS + +KQ P L+DV+AG+TGKK Sbjct: 1 MPIMEKLRMFVAQEPVVAASCLIGGVGLFLPAVVRPILDSLEASKQVKAPPLTDVIAGVTGKK 63
BLAST of Cicer_arietinum_v1_Contig1693 vs. TrEMBL
Match: A9PAD2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_644598 PE=4 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.302e-17 Identity = 45/65 (69.23%), Postives = 55/65 (84.62%), Query Frame = 3 Query: 69 MAIMERLRMLVAQEPVLAASCLIAGFGLFLPAFVRPMLDSYQTTKQPP--QPALSDVVAGMTGKK 257 M +ME+LRM VAQEPV+AASCLIAG GLFLPA VRP+LDS + +K P QP++SDV+AGMTGK+ Sbjct: 1 MPVMEKLRMFVAQEPVVAASCLIAGIGLFLPAVVRPILDSLEGSKHVPEKQPSISDVLAGMTGKR 65
BLAST of Cicer_arietinum_v1_Contig1693 vs. TrEMBL
Match: Q9ZPY5_ARATH (At2g46540/F11C10.23 OS=Arabidopsis thaliana GN=At2g46540 PE=4 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 8.231e-17 Identity = 43/63 (68.25%), Postives = 52/63 (82.54%), Query Frame = 3 Query: 69 MAIMERLRMLVAQEPVLAASCLIAGFGLFLPAFVRPMLDSYQTTKQPPQPALSDVVAGMTGKK 257 M +ME+LRM VAQEPV+AASCLI G GLFLPA VRP+LDS + +KQ P L+DV+AG+TGKK Sbjct: 1 MPVMEKLRMFVAQEPVVAASCLIGGVGLFLPAVVRPILDSLEASKQVKAPPLTDVIAGVTGKK 63
BLAST of Cicer_arietinum_v1_Contig1693 vs. TAIR peptide
Match: AT2G46540.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:19110687-19111681 REVERSE LENGTH=65) HSP 1 Score: 90.1225 bits (222), Expect = 7.197e-19 Identity = 43/63 (68.25%), Postives = 52/63 (82.54%), Query Frame = 3 Query: 69 MAIMERLRMLVAQEPVLAASCLIAGFGLFLPAFVRPMLDSYQTTKQPPQPALSDVVAGMTGKK 257 M +ME+LRM VAQEPV+AASCLI G GLFLPA VRP+LDS + +KQ P L+DV+AG+TGKK Sbjct: 1 MPVMEKLRMFVAQEPVVAASCLIGGVGLFLPAVVRPILDSLEASKQVKAPPLTDVIAGVTGKK 63 The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1693 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of Cicer_arietinum_v1_Contig1693 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Sequences
The
following sequences are available for this feature:
contig sequence >Cicer_arietinum_v1_Contig1693 ID=Cicer_arietinum_v1_Contig1693; Name=Cicer_arietinum_v1_Contig1693; organism=Cicer arietinum; type=contig; length=516bpback to top |