Cicer_arietinum_v1_Contig29
Contig Overview
Alignments
The following features are aligned
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
Homology
BLAST of Cicer_arietinum_v1_Contig29 vs. SwissProt
Match: TM9S3_MOUSE (Transmembrane 9 superfamily member 3 OS=Mus musculus GN=Tm9sf3 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.463e-17 Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 YS YYY+ KTKM G FQTSFYFGY +FS LGI+CGA+G++G++ FVR IY N+K D Sbjct: 530 YSFYYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 587
BLAST of Cicer_arietinum_v1_Contig29 vs. SwissProt
Match: TM9S3_HUMAN (Transmembrane 9 superfamily member 3 OS=Homo sapiens GN=TM9SF3 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 3.463e-17 Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 YS YYY+ KTKM G FQTSFYFGY +FS LGI+CGA+G++G++ FVR IY N+K D Sbjct: 532 YSFYYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 589
BLAST of Cicer_arietinum_v1_Contig29 vs. SwissProt
Match: PHG1B_DICDI (Putative phagocytic receptor 1b OS=Dictyostelium discoideum GN=phg1b PE=2 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 2.035e-9 Identity = 30/58 (51.72%), Postives = 36/58 (62.07%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 YSIYYYY + M G Q +FYF Y L+ IL G VGF S +FV+ IYRN+K D Sbjct: 530 YSIYYYYYISHMYGLLQATFYFTYMLIVCFFFFILLGTVGFYSSLIFVKRIYRNLKSD 587
BLAST of Cicer_arietinum_v1_Contig29 vs. SwissProt
Match: YON8_SCHPO (Transmembrane 9 superfamily protein C1105.08 OS=Schizosaccharomyces pombe GN=SPBC1105.08 PE=2 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 8.551e-8 Identity = 25/58 (43.10%), Postives = 37/58 (63.79%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 +S++Y++ K S YFGY+L+ S+ + LCG+VGF G+ LFV IY +IK D Sbjct: 572 FSVFYWFFKISSSSLATAVLYFGYSLLISVLVFFLCGSVGFFGAFLFVNKIYASIKID 629
BLAST of Cicer_arietinum_v1_Contig29 vs. TrEMBL
Match: B9SXF5_RICCO (Endomembrane protein emp70, putative OS=Ricinus communis GN=RCOM_0321070 PE=4 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.956e-25 Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 YSIYYYYVKTKMSGFFQTSFYFGYTLMF LGLGILCGAVG+LGSNLFVR IYRNIKCD Sbjct: 545 YSIYYYYVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 602
BLAST of Cicer_arietinum_v1_Contig29 vs. TrEMBL
Match: Q940G0_ARATH (At1g10950/T19D16_13 OS=Arabidopsis thaliana GN=At1g10950/ T19D16.13 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.337e-25 Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 YSIYYYYVKTKMSGFFQTSFYFGYT+MF LGLGILCGAVG+LGSNLFVR IYRNIKCD Sbjct: 532 YSIYYYYVKTKMSGFFQTSFYFGYTMMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 589
BLAST of Cicer_arietinum_v1_Contig29 vs. TrEMBL
Match: Q93ZV4_ARATH (Putative endomembrane protein EMP70 precusor isolog (Fragment) OS=Arabidopsis thaliana GN=At1g10950 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.337e-25 Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 YSIYYYYVKTKMSGFFQTSFYFGYT+MF LGLGILCGAVG+LGSNLFVR IYRNIKCD Sbjct: 404 YSIYYYYVKTKMSGFFQTSFYFGYTMMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 461
BLAST of Cicer_arietinum_v1_Contig29 vs. TrEMBL
Match: Q0WMB1_ARATH (Putative endomembrane protein EMP70 precusor isolog (Fragment) OS=Arabidopsis thaliana GN=At1g10950 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.337e-25 Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 YSIYYYYVKTKMSGFFQTSFYFGYT+MF LGLGILCGAVG+LGSNLFVR IYRNIKCD Sbjct: 79 YSIYYYYVKTKMSGFFQTSFYFGYTMMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 136
BLAST of Cicer_arietinum_v1_Contig29 vs. TrEMBL
Match: O04091_ARATH (Endomembrane protein EMP70 precusor isolog; 68664-64364 OS=Arabidopsis thaliana GN=T19D16.13 PE=4 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.337e-25 Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 YSIYYYYVKTKMSGFFQTSFYFGYT+MF LGLGILCGAVG+LGSNLFVR IYRNIKCD Sbjct: 532 YSIYYYYVKTKMSGFFQTSFYFGYTMMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 589
BLAST of Cicer_arietinum_v1_Contig29 vs. TrEMBL
Match: D7KLL1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471233 PE=4 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.337e-25 Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 YSIYYYYVKTKMSGFFQTSFYFGYT+MF LGLGILCGAVG+LGSNLFVR IYRNIKCD Sbjct: 531 YSIYYYYVKTKMSGFFQTSFYFGYTMMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 588
BLAST of Cicer_arietinum_v1_Contig29 vs. TrEMBL
Match: D7U9A9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_41.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00026057001 PE=4 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.709e-25 Identity = 54/58 (93.10%), Postives = 55/58 (94.83%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 YSIYYYY+KTKMSGFFQTSFYFGYTLM LGLGILCGAVGFLGSNLFVR IYRNIKCD Sbjct: 692 YSIYYYYMKTKMSGFFQTSFYFGYTLMLCLGLGILCGAVGFLGSNLFVRRIYRNIKCD 749
BLAST of Cicer_arietinum_v1_Contig29 vs. TrEMBL
Match: D7TGZ4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_35.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00023343001 PE=4 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.709e-25 Identity = 54/58 (93.10%), Postives = 55/58 (94.83%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 YSIYYYYVKTKMSGFFQTSFYFGYTLMF LGLGILCGAVG+LGS LFVR IYRNIKCD Sbjct: 535 YSIYYYYVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSTLFVRRIYRNIKCD 592
BLAST of Cicer_arietinum_v1_Contig29 vs. TrEMBL
Match: A5BNX7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037096 PE=4 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.709e-25 Identity = 54/58 (93.10%), Postives = 55/58 (94.83%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 YSIYYYY+KTKMSGFFQTSFYFGYTLM LGLGILCGAVGFLGSNLFVR IYRNIKCD Sbjct: 543 YSIYYYYMKTKMSGFFQTSFYFGYTLMLCLGLGILCGAVGFLGSNLFVRRIYRNIKCD 600
BLAST of Cicer_arietinum_v1_Contig29 vs. TrEMBL
Match: B9GZ61_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1073270 PE=4 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.268e-24 Identity = 53/58 (91.38%), Postives = 56/58 (96.55%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 YSIYY+YVKTKMSGFFQTSFYFGYTLMF LGLGILCGAVG+LGSNLFVR IY+NIKCD Sbjct: 541 YSIYYFYVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSNLFVRRIYKNIKCD 598
BLAST of Cicer_arietinum_v1_Contig29 vs. TAIR peptide
Match: AT1G10950.1 (| Symbols: TMN1, AtTMN1 | transmembrane nine 1 | chr1:3659322-3663622 FORWARD LENGTH=589) HSP 1 Score: 118.627 bits (296), Expect = 2.504e-27 Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 YSIYYYYVKTKMSGFFQTSFYFGYT+MF LGLGILCGAVG+LGSNLFVR IYRNIKCD Sbjct: 532 YSIYYYYVKTKMSGFFQTSFYFGYTMMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 589
BLAST of Cicer_arietinum_v1_Contig29 vs. TAIR peptide
Match: AT5G37310.1 (| Symbols: | Endomembrane protein 70 protein family | chr5:14772836-14776093 REVERSE LENGTH=593) HSP 1 Score: 73.1738 bits (178), Expect = 1.206e-13 Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 Y +YYYY ++ MSGF QTSF+FGY G ++ G +GF S LFVR IYR+IKC+ Sbjct: 536 YCLYYYYARSDMSGFMQTSFFFGYMACICYGFFLMLGTIGFCASLLFVRHIYRSIKCE 593
BLAST of Cicer_arietinum_v1_Contig29 vs. TAIR peptide
Match: AT2G01970.1 (| Symbols: | Endomembrane protein 70 protein family | chr2:452197-454819 REVERSE LENGTH=592) HSP 1 Score: 72.0182 bits (175), Expect = 2.687e-13 Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 Y +YYYY ++ MSGF QTSF+FGY G ++ G VGF + LFVR IYR+IKC+ Sbjct: 535 YCLYYYYARSDMSGFMQTSFFFGYMACICYGFFLMLGTVGFRAALLFVRHIYRSIKCE 592
BLAST of Cicer_arietinum_v1_Contig29 vs. TAIR peptide
Match: AT1G14670.1 (| Symbols: | Endomembrane protein 70 protein family | chr1:5037669-5040199 FORWARD LENGTH=592) HSP 1 Score: 72.0182 bits (175), Expect = 2.687e-13 Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 Y +YYYY ++ MSGF QTSF+FGY G ++ G VGF + LFVR IYR+IKC+ Sbjct: 535 YCLYYYYARSDMSGFMQTSFFFGYMACICYGFFLMLGTVGFRAALLFVRHIYRSIKCE 592
BLAST of Cicer_arietinum_v1_Contig29 vs. TAIR peptide
Match: AT1G08350.2 (| Symbols: | Endomembrane protein 70 protein family | chr1:2632970-2635605 REVERSE LENGTH=589) HSP 1 Score: 55.8398 bits (133), Expect = 1.993e-8 Identity = 22/53 (41.51%), Postives = 36/53 (67.92%), Query Frame = -2 Query: 409 YYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 567 +Y+++ M+GF Q SFY GYT + L ++ G + FL S +F+R IYR++K + Sbjct: 537 FYLRSDMTGFLQLSFYLGYTALLCYALFLVLGTISFLASLMFIRHIYRSVKLE 589
BLAST of Cicer_arietinum_v1_Contig29 vs. TAIR peptide
Match: AT1G08350.1 (| Symbols: | Endomembrane protein 70 protein family | chr1:2632970-2635055 REVERSE LENGTH=508) HSP 1 Score: 55.8398 bits (133), Expect = 1.993e-8 Identity = 22/53 (41.51%), Postives = 36/53 (67.92%), Query Frame = -2 Query: 409 YYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 567 +Y+++ M+GF Q SFY GYT + L ++ G + FL S +F+R IYR++K + Sbjct: 456 FYLRSDMTGFLQLSFYLGYTALLCYALFLVLGTISFLASLMFIRHIYRSVKLE 508
BLAST of Cicer_arietinum_v1_Contig29 vs. TAIR peptide
Match: AT1G55130.1 (| Symbols: TMN6, AtTMN6 | Endomembrane protein 70 protein family | chr1:20569654-20572266 FORWARD LENGTH=637) HSP 1 Score: 50.8322 bits (120), Expect = 6.411e-7 Identity = 21/58 (36.21%), Postives = 34/58 (58.62%), Query Frame = -2 Query: 409 YSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRXIYRNIKCD 582 YS++Y++ K ++S YFGY ++ S +L G++GF FVR IY ++K D Sbjct: 580 YSVFYFFTKLEISKLVSGVLYFGYMIIISYSFFVLTGSIGFYACLWFVRKIYSSVKID 637 The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig29 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 4
BLAST of Cicer_arietinum_v1_Contig29 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of Cicer_arietinum_v1_Contig29 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 7
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Sequences
The
following sequences are available for this feature:
contig sequence >Cicer_arietinum_v1_Contig29 ID=Cicer_arietinum_v1_Contig29; Name=Cicer_arietinum_v1_Contig29; organism=Cicer arietinum; type=contig; length=598bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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