HO065506

EST Overview


Name	HO065506
Unique Name	HO065506
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	461

Libraries


Library Name	Type
LIBEST_026412 Chickpea drought stressed cDNA SSH library AS1	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO065506 vs. SwissProt
Match: GLYM_PEA (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 8.205e-54
Identity = 87/117 (74.36%), Postives = 91/117 (77.78%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            YEDKINQAVFPG QGGPHNHTI GL VAL QA TPEY+AYQ QV   SSKFA+ LSEKGY+L  GGTENHLVL NLK K IDGSRV KVLE V  AANKN  PGDV   VPGG + G
Sbjct:  317 YEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVLSNSSKFAKALSEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMG 433

HSP 2 Score: 59.6918 bits (143), Expect = 8.205e-54
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP LTSRGFVEEDFVKV EYFDA+V+LALKVK E
Sbjct:  434 TPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAE 467

[Close]

BLAST of HO065506 vs. SwissProt
Match: GLYM_SOLTU (Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.375e-52
Identity = 86/117 (73.50%), Postives = 91/117 (77.78%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            YEDKINQAVFPG QGGPHNHTI GL VAL QA TPEY+AYQ QV   SSKFAQ L EKGYEL  GGT+NHLVL N+K K IDGSRV KVLE+V  AANKN  PGDV   VPGG + G
Sbjct:  317 YEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVLSNSSKFAQALGEKGYELVSGGTDNHLVLVNMKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 433

HSP 2 Score: 53.5286 bits (127), Expect = 4.375e-52
Identity = 24/34 (70.59%), Postives = 30/34 (88.24%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP LTSRGF+EEDFVKV ++FDA+V +A+KVK E
Sbjct:  434 TPALTSRGFLEEDFVKVADFFDAAVKIAVKVKAE 467

[Close]

BLAST of HO065506 vs. SwissProt
Match: GLYM_ARATH (Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=SHM1 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 3.646e-51
Identity = 84/117 (71.79%), Postives = 91/117 (77.78%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            +EDKINQAVFPG QGGPHNHTI GL VAL QA T EYKAYQ QV   S+KFAQTL E+GYEL  GGT+NHLVL NLK K IDGSRV KVLE+V  A+NKN  PGDV   VPGG + G
Sbjct:  316 FEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGDVSAMVPGGIRMG 432

HSP 2 Score: 55.0694 bits (131), Expect = 3.646e-51
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP LTSRGFVEEDF KV EYFD +V +ALKVK E
Sbjct:  433 TPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSE 466

[Close]

BLAST of HO065506 vs. SwissProt
Match: GLYM_FLAPR (Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.530e-49
Identity = 84/117 (71.79%), Postives = 90/117 (76.92%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            YEDKINQAVFPG QGGPHNHTI GL VAL QA T EYKAYQ QV   S+KFA+TL + GYEL  GGTENHLVL NLK K IDGS+V KVLE+V  AANKN  PGDV   VPGG + G
Sbjct:  317 YEDKINQAVFPGLQGGPHNHTITGLAVALKQATTAEYKAYQEQVMSNSAKFAETLVKSGYELVSGGTENHLVLVNLKNKGIDGSKVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 433

HSP 2 Score: 50.0618 bits (118), Expect = 2.530e-49
Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP LTSRGFVEEDF KV  +FD +V LA+K+K E
Sbjct:  434 TPALTSRGFVEEDFAKVAYFFDLAVKLAVKIKGE 467

[Close]

BLAST of HO065506 vs. SwissProt
Match: GLYN_FLAPR (Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.241e-48
Identity = 84/117 (71.79%), Postives = 89/117 (76.07%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            YEDKINQAVFPG QGGPHNHTI GL VAL QA T EYKAYQ QV    +KFA+TL + GYEL  GGTENHLVL NLK K IDGSRV KVLE+V  AANKN  PGDV   VPGG + G
Sbjct:  317 YEDKINQAVFPGLQGGPHNHTITGLAVALKQATTAEYKAYQEQVMSNCAKFAETLVKSGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 433

HSP 2 Score: 48.521 bits (114), Expect = 1.241e-48
Identity = 23/34 (67.65%), Postives = 26/34 (76.47%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP LTSRGFVEEDF KV   FD +V LA+K+K E
Sbjct:  434 TPALTSRGFVEEDFAKVAYLFDLAVKLAVKIKGE 467

[Close]

BLAST of HO065506 vs. SwissProt
Match: GLYM_NEUCR (Putative serine hydroxymethyltransferase, mitochondrial OS=Neurospora crassa GN=NCU05805 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 8.273e-34
Identity = 67/122 (54.92%), Postives = 78/122 (63.93%), Query Frame = -1

Query:  108 EDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEK------GYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 455
            E  IN +VFPG QGGPHNHTI  L VAL QA TPE++AYQ QV   ++  A  L E       GY +  GGT+NHLVL +LK + IDGSRV +VLE V  AANKN  PGD     PGG + G
Sbjct:  317 ETPINASVFPGHQGGPHNHTIAALAVALKQAQTPEFRAYQSQVLANATALAARLGEPKDKNGLGYTIVSGGTDNHLVLIDLKPQGIDGSRVERVLELVGVAANKNTVPGDKSALTPGGLRIG 438

HSP 2 Score: 37.7354 bits (86), Expect = 8.273e-34
Identity = 14/31 (45.16%), Postives = 23/31 (74.19%), Query Frame = -3

Query:   13 TPXLTSRGFVEEDFVKVXEYFDASVNLALKV 105
            TP +T+RGF EEDF +V +  D +V +A+++
Sbjct:  439 TPAMTTRGFTEEDFARVADIIDRAVTIAVRI 469

[Close]

BLAST of HO065506 vs. SwissProt
Match: GLYM_BOVIN (Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus GN=SHMT2 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.829e-33
Identity = 59/117 (50.43%), Postives = 74/117 (63.25%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            +ED+IN AVFP  QGGPHNH I  + VAL QA TP ++ Y  Q+   +   A  L E+GY L  GGT+NHLVL +L+ K +DG+R  +VLE V   ANKN  PGD     PGG + G
Sbjct:  311 FEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQILKNAQAMANALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLG 427

HSP 2 Score: 40.4318 bits (93), Expect = 1.829e-33
Identity = 18/31 (58.06%), Postives = 23/31 (74.19%), Query Frame = -3

Query:   10 PXLTSRGFVEEDFVKVXEYFDASVNLALKVK 102
            P LTSRGF+E+DF KV  + D  VN+ L+VK
Sbjct:  429 PALTSRGFLEDDFRKVVGFIDEGVNIGLEVK 459

[Close]

BLAST of HO065506 vs. SwissProt
Match: GLYM_CANGA (Serine hydroxymethyltransferase, mitochondrial OS=Candida glabrata GN=SHM1 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.263e-33
Identity = 59/117 (50.43%), Postives = 74/117 (63.25%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            ++  IN +VFPG QGGPHNHTI  L VAL QA TPE+  YQ QV   +  F   L ++G+EL  GGT+NHL+L NL    IDG+R+  +LE +  AANKN  PGD     P G + G
Sbjct:  290 FDKTINFSVFPGHQGGPHNHTISALAVALKQAKTPEFVEYQKQVVSNAKAFGDELLKRGFELVSGGTDNHLLLLNLSNMGIDGARLEAILEKINIAANKNTIPGDKSALFPSGLRVG 406

HSP 2 Score: 40.4318 bits (93), Expect = 5.263e-33
Identity = 17/34 (50.00%), Postives = 25/34 (73.53%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP +T+RGF E+DF KV EY D +V L++ +K +
Sbjct:  407 TPAMTTRGFQEQDFKKVAEYIDNAVKLSIALKSQ 440

[Close]

BLAST of HO065506 vs. SwissProt
Match: GLYM_RABIT (Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus cuniculus GN=SHMT2 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 3.341e-32
Identity = 60/117 (51.28%), Postives = 74/117 (63.25%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            +ED+IN AVFP  QGGPHNH I  + VAL QA TP ++ Y  QV   +   A  L E+GY L  GGT+NHLVL +L+ K +DG+R  +VLE V   ANKN  PGD     PGG + G
Sbjct:  311 FEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLG 427

HSP 2 Score: 36.1946 bits (82), Expect = 3.341e-32
Identity = 16/31 (51.61%), Postives = 22/31 (70.97%), Query Frame = -3

Query:   10 PXLTSRGFVEEDFVKVXEYFDASVNLALKVK 102
            P LTSR F E+DF +V ++ D  VN+ L+VK
Sbjct:  429 PALTSRQFREDDFRRVVDFIDEGVNIGLEVK 459

[Close]

BLAST of HO065506 vs. SwissProt
Match: GLYM_HUMAN (Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens GN=SHMT2 PE=1 SV=3)

HSP 1 Score: 122.094 bits (305), Expect = 3.341e-32
Identity = 60/117 (51.28%), Postives = 74/117 (63.25%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            +ED+IN AVFP  QGGPHNH I  + VAL QA TP ++ Y  QV   +   A  L E+GY L  GGT+NHLVL +L+ K +DG+R  +VLE V   ANKN  PGD     PGG + G
Sbjct:  311 FEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLG 427

HSP 2 Score: 36.1946 bits (82), Expect = 3.341e-32
Identity = 16/31 (51.61%), Postives = 22/31 (70.97%), Query Frame = -3

Query:   10 PXLTSRGFVEEDFVKVXEYFDASVNLALKVK 102
            P LTSR F E+DF +V ++ D  VN+ L+VK
Sbjct:  429 PALTSRQFREDDFRRVVDFIDEGVNIGLEVK 459

[Close]

BLAST of HO065506 vs. TrEMBL
Match: A9YWS0_MEDTR (Serine hydroxymethyltransferase OS=Medicago truncatula PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 5.315e-54
Identity = 88/117 (75.21%), Postives = 91/117 (77.78%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            YEDKINQAVFPG QGGPHNHTI GL VAL QA TPEYKAYQ QV    +KFAQ LSEKGYEL  GGTENHLVL NLK K IDGSRV KVLE+V  AANKN  PGDV   VPGG + G
Sbjct:  317 YEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCAKFAQALSEKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 433

HSP 2 Score: 62.3882 bits (150), Expect = 5.315e-54
Identity = 30/34 (88.24%), Postives = 31/34 (91.18%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP LTSRGFVEEDFVKV EYFDASVNLALK+K E
Sbjct:  434 TPALTSRGFVEEDFVKVAEYFDASVNLALKIKAE 467

[Close]

BLAST of HO065506 vs. TrEMBL
Match: C6ZJZ0_SOYBN (Serine hydroxymethyltransferase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.365e-51
Identity = 87/117 (74.36%), Postives = 91/117 (77.78%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            YEDKINQAVFPG QGGPHNHTI GL VAL QA TPEY+AYQ QV   S KFAQ LSE+GYEL  GGTENHLVL NLK K IDGSRV KVLE+V  AANKN  PGDV   VPGG + G
Sbjct:  317 YEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVLSNSFKFAQALSERGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 433

HSP 2 Score: 55.0694 bits (131), Expect = 2.365e-51
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP LTSRGFVEEDFVKV E+FDA+V LA+K+K +
Sbjct:  434 TPALTSRGFVEEDFVKVAEFFDAAVKLAVKIKGQ 467

[Close]

BLAST of HO065506 vs. TrEMBL
Match: D7T5C1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_211.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003859001 PE=4 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 4.018e-51
Identity = 87/117 (74.36%), Postives = 90/117 (76.92%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            YEDKINQAVFPG QGGPHNHTI GL VAL QA T EYKAYQ QV    SKFA+TL +KGYEL  GGTENHLVL NLK K IDGSRV KVLESV  AANKN  PGDV   VPGG + G
Sbjct:  317 YEDKINQAVFPGLQGGPHNHTIAGLAVALKQATTSEYKAYQEQVLSNCSKFAETLIKKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMG 433

HSP 2 Score: 56.6102 bits (135), Expect = 4.018e-51
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP LTSRGFVEEDFVKV EYFDA+V +A+K+K E
Sbjct:  434 TPALTSRGFVEEDFVKVAEYFDAAVTVAVKIKAE 467

[Close]

BLAST of HO065506 vs. TrEMBL
Match: B2BGS6_OLEEU (Glycine/serine hydroxymethyltransferase reductase (Fragment) OS=Olea europaea PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.298e-51
Identity = 86/117 (73.50%), Postives = 90/117 (76.92%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            YE+KINQAVFPG QGGPHNHTI GL VAL QA TPEYKAYQ QV    SKFAQTL +K Y+L  GGTENHLVL NLK K IDGSRV KVLESV  AANKN  PGDV   VPGG + G
Sbjct:    2 YEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVMSNCSKFAQTLVKKSYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMG 118

HSP 2 Score: 56.9954 bits (136), Expect = 5.298e-51
Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = -3

Query:   10 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVK 105
            TP LTSRGFVEEDFVKV E+FDASV LALK+K
Sbjct:  119 TPALTSRGFVEEDFVKVAEFFDASVKLALKIK 150

[Close]

BLAST of HO065506 vs. TrEMBL
Match: C6ZJY8_SOYBN (Serine hydroxymethyltransferase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 8.899e-51
Identity = 86/117 (73.50%), Postives = 90/117 (76.92%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            YEDKINQAVFPG QGGPHNHTI GL VAL QA TPEY+AYQ QV   S KFAQ LSE+ YEL  GGTENHLVL NLK K IDGSRV KVLE+V  AANKN  PGDV   VPGG + G
Sbjct:  315 YEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVLSNSFKFAQALSERSYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG 431

HSP 2 Score: 55.4546 bits (132), Expect = 8.899e-51
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP LTSRGFVEEDFVKV E+FDA+V +A+K+K E
Sbjct:  432 TPALTSRGFVEEDFVKVAEFFDAAVKIAVKIKGE 465

[Close]

BLAST of HO065506 vs. TrEMBL
Match: D7M9M1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_490821 PE=4 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.512e-50
Identity = 85/117 (72.65%), Postives = 91/117 (77.78%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            +EDKINQAVFPG QGGPHNHTI GL VAL QA T EYKAYQ QV   S+KFAQTL EKGYEL  GGT+NHLVL NLK K IDGSRV KVLE+V  A+NKN  PGDV   VPGG + G
Sbjct:  316 FEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVLSNSAKFAQTLMEKGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGDVSAMVPGGIRMG 432

HSP 2 Score: 55.8398 bits (133), Expect = 1.512e-50
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP LTSRGFVEEDF KV EYFD +V LALKVK E
Sbjct:  433 TPALTSRGFVEEDFAKVAEYFDKAVTLALKVKSE 466

[Close]

BLAST of HO065506 vs. TrEMBL
Match: A9PL05_POPTM (Serine hydroxymethyltransferase OS=Populus tremuloides GN=SHMT2 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.971e-50
Identity = 88/117 (75.21%), Postives = 90/117 (76.92%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            YEDKINQAVFPG QGGPHNHTI GL VAL QA T EYKAYQ QV    SKFAQ+L EKGYEL  GGTENHLVL NLK K IDGSRV KVLESV  AANKN  PGDV   VPGG + G
Sbjct:  320 YEDKINQAVFPGLQGGPHNHTIAGLAVALKQATTLEYKAYQEQVLSNCSKFAQSLVEKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMG 436

HSP 2 Score: 53.9138 bits (128), Expect = 1.971e-50
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP LTSRGFVEEDF KV ++FDASV LA+K+K E
Sbjct:  437 TPALTSRGFVEEDFAKVADFFDASVKLAVKMKAE 470

[Close]

BLAST of HO065506 vs. TrEMBL
Match: A9PJ09_9ROSI (Serine hydroxymethyltransferase OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.971e-50
Identity = 88/117 (75.21%), Postives = 90/117 (76.92%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            YEDKINQAVFPG QGGPHNHTI GL VAL QA T EYKAYQ QV    SKFAQ+L EKGYEL  GGTENHLVL NLK K IDGSRV KVLESV  AANKN  PGDV   VPGG + G
Sbjct:  320 YEDKINQAVFPGLQGGPHNHTIAGLAVALKQATTLEYKAYQEQVLSNCSKFAQSLVEKGYELVSGGTENHLVLVNLKTKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMG 436

HSP 2 Score: 53.9138 bits (128), Expect = 1.971e-50
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP LTSRGFVEEDF KV ++FDASV LA+K+K E
Sbjct:  437 TPALTSRGFVEEDFAKVADFFDASVKLAVKMKAE 470

[Close]

BLAST of HO065506 vs. TrEMBL
Match: B9HK13_POPTR (Serine hydroxymethyltransferase (Fragment) OS=Populus trichocarpa GN=SHMT2 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.971e-50
Identity = 88/117 (75.21%), Postives = 90/117 (76.92%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            YEDKINQAVFPG QGGPHNHTI GL VAL QA T EYKAYQ QV    SKFAQ+L EKGYEL  GGTENHLVL NLK K IDGSRV KVLESV  AANKN  PGDV   VPGG + G
Sbjct:  318 YEDKINQAVFPGLQGGPHNHTIAGLAVALKQATTLEYKAYQEQVLSNCSKFAQSLVEKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMG 434

HSP 2 Score: 53.9138 bits (128), Expect = 1.971e-50
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP LTSRGFVEEDF KV ++FDASV LA+K+K E
Sbjct:  435 TPALTSRGFVEEDFAKVADFFDASVKLAVKMKAE 468

[Close]

BLAST of HO065506 vs. TrEMBL
Match: B9GN69_POPTR (Serine hydroxymethyltransferase OS=Populus trichocarpa GN=SHMT3 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.971e-50
Identity = 87/117 (74.36%), Postives = 90/117 (76.92%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            YEDKINQAVFPG QGGPHNHTI GL VAL QA TPEYKAYQ QV    SKFAQ+L EKGYEL  GGTENHLVL NL+ K IDGSRV KVLE V  AANKN  PGDV   VPGG + G
Sbjct:  316 YEDKINQAVFPGLQGGPHNHTISGLAVALKQARTPEYKAYQEQVLSNCSKFAQSLIEKGYELVSGGTENHLVLVNLRNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMG 432

HSP 2 Score: 53.9138 bits (128), Expect = 1.971e-50
Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP LTSRGF+E DFVKV E+FDA+V LALK+K +
Sbjct:  433 TPALTSRGFIERDFVKVAEFFDAAVKLALKIKAD 466

[Close]

BLAST of HO065506 vs. TAIR peptide
Match: AT4G37930.1 (| Symbols: SHM1, STM, SHMT1 | serine transhydroxymethyltransferase 1 | chr4:17831891-17834742 REVERSE LENGTH=517)

HSP 1 Score: 166.777 bits (421), Expect = 4.241e-52
Identity = 84/117 (71.79%), Postives = 91/117 (77.78%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            +EDKINQAVFPG QGGPHNHTI GL VAL QA T EYKAYQ QV   S+KFAQTL E+GYEL  GGT+NHLVL NLK K IDGSRV KVLE+V  A+NKN  PGDV   VPGG + G
Sbjct:  316 FEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGDVSAMVPGGIRMG 432

HSP 2 Score: 55.0694 bits (131), Expect = 4.241e-52
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP LTSRGFVEEDF KV EYFD +V +ALKVK E
Sbjct:  433 TPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSE 466

[Close]

BLAST of HO065506 vs. TAIR peptide
Match: AT5G26780.1 (| Symbols: SHM2 | serine hydroxymethyltransferase 2 | chr5:9418299-9421725 FORWARD LENGTH=517)

HSP 1 Score: 165.622 bits (418), Expect = 1.596e-51
Identity = 84/117 (71.79%), Postives = 89/117 (76.07%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            YED+INQAVFPG QGGPHNHTI GL VAL QA TPEYKAYQ QV    SKFA+TL  KGY+L  GGT+NHLVL NLK K IDGSRV KVLE V  AANKN  PGDV   VPGG + G
Sbjct:  316 YEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVLRNCSKFAETLLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMG 432

HSP 2 Score: 54.299 bits (129), Expect = 1.596e-51
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP LTSRGF+EEDF KV EYFD +V +ALK+K E
Sbjct:  433 TPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAE 466

[Close]

BLAST of HO065506 vs. TAIR peptide
Match: AT5G26780.2 (| Symbols: SHM2 | serine hydroxymethyltransferase 2 | chr5:9418299-9421725 FORWARD LENGTH=533)

HSP 1 Score: 156.377 bits (394), Expect = 9.214e-49
Identity = 85/133 (63.91%), Postives = 89/133 (66.92%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFA----------------QTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            YED+INQAVFPG QGGPHNHTI GL VAL QA TPEYKAYQ QV    SKFA                QTL  KGY+L  GGT+NHLVL NLK K IDGSRV KVLE V  AANKN  PGDV   VPGG + G
Sbjct:  316 YEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVLRNCSKFAELDIRPTVIISYGLSMQTLLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMG 448

HSP 2 Score: 54.299 bits (129), Expect = 9.214e-49
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP LTSRGF+EEDF KV EYFD +V +ALK+K E
Sbjct:  449 TPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAE 482

[Close]

BLAST of HO065506 vs. TAIR peptide
Match: AT5G26780.3 (| Symbols: SHM2 | serine hydroxymethyltransferase 2 | chr5:9418299-9421725 FORWARD LENGTH=533)

HSP 1 Score: 156.377 bits (394), Expect = 9.214e-49
Identity = 85/133 (63.91%), Postives = 89/133 (66.92%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFA----------------QTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            YED+INQAVFPG QGGPHNHTI GL VAL QA TPEYKAYQ QV    SKFA                QTL  KGY+L  GGT+NHLVL NLK K IDGSRV KVLE V  AANKN  PGDV   VPGG + G
Sbjct:  316 YEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVLRNCSKFAELDIRPTVIISYGLSMQTLLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMG 448

HSP 2 Score: 54.299 bits (129), Expect = 9.214e-49
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP LTSRGF+EEDF KV EYFD +V +ALK+K E
Sbjct:  449 TPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAE 482

[Close]

BLAST of HO065506 vs. TAIR peptide
Match: AT4G32520.2 (| Symbols: SHM3 | serine hydroxymethyltransferase 3 | chr4:15689642-15692334 REVERSE LENGTH=529)

HSP 1 Score: 117.857 bits (294), Expect = 8.182e-30
Identity = 58/116 (50.00%), Postives = 73/116 (62.93%), Query Frame = -1

Query:  108 EDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 455
            E  +N AVFPG QGGPHNHTI GL V L  A +PE+KAYQ +V       A  L E G++L  GG++NHLVL +L+   +DG+RV K+L+      NKN  PGD    VPGG + G
Sbjct:  337 ESAVNNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKAYQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIG 452

HSP 2 Score: 29.261 bits (64), Expect = 8.182e-30
Identity = 11/32 (34.38%), Postives = 20/32 (62.50%), Query Frame = -3

Query:   10 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVK 105
            +P +T+RG  E+DFV V ++    V + ++ K
Sbjct:  453 SPAMTTRGLSEKDFVVVADFIKEGVEITMEAK 484

[Close]

BLAST of HO065506 vs. TAIR peptide
Match: AT4G32520.1 (| Symbols: SHM3, AtSHMT3 | serine hydroxymethyltransferase 3 | chr4:15689642-15692334 REVERSE LENGTH=529)

HSP 1 Score: 117.857 bits (294), Expect = 8.182e-30
Identity = 58/116 (50.00%), Postives = 73/116 (62.93%), Query Frame = -1

Query:  108 EDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 455
            E  +N AVFPG QGGPHNHTI GL V L  A +PE+KAYQ +V       A  L E G++L  GG++NHLVL +L+   +DG+RV K+L+      NKN  PGD    VPGG + G
Sbjct:  337 ESAVNNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKAYQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIG 452

HSP 2 Score: 29.261 bits (64), Expect = 8.182e-30
Identity = 11/32 (34.38%), Postives = 20/32 (62.50%), Query Frame = -3

Query:   10 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVK 105
            +P +T+RG  E+DFV V ++    V + ++ K
Sbjct:  453 SPAMTTRGLSEKDFVVVADFIKEGVEITMEAK 484

[Close]

BLAST of HO065506 vs. TAIR peptide
Match: AT4G13930.1 (| Symbols: SHM4 | serine hydroxymethyltransferase 4 | chr4:8048013-8050021 REVERSE LENGTH=471)

HSP 1 Score: 103.219 bits (256), Expect = 1.317e-26
Identity = 54/117 (46.15%), Postives = 67/117 (57.26%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            +EDKIN AVFP  QGGPHNH I  L VAL QA TP +K Y  QV   +      L  KGY++   GTENHLVL +L+   + G++V K+ +      NKN   GD     PGG + G
Sbjct:  275 FEDKINFAVFPALQGGPHNHQIGALAVALKQANTPGFKVYAKQVKANAVALGNYLMSKGYQIVTNGTENHLVLWDLRPLGLTGNKVEKLCDLCSITLNKNAVFGDSSALAPGGVRIG 391

HSP 2 Score: 33.113 bits (74), Expect = 1.317e-26
Identity = 13/31 (41.94%), Postives = 21/31 (67.74%), Query Frame = -3

Query:   10 PXLTSRGFVEEDFVKVXEYFDASVNLALKVK 102
            P +TSRG VE+DF ++ E+   +V L L ++
Sbjct:  393 PAMTSRGLVEKDFEQIGEFLSRAVTLTLDIQ 423

[Close]

BLAST of HO065506 vs. TAIR peptide
Match: AT4G13890.1 (| Symbols: SHM5, EDA36, EDA37 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr4:8032146-8033718 REVERSE LENGTH=470)

HSP 1 Score: 93.5893 bits (231), Expect = 1.508e-24
Identity = 49/117 (41.88%), Postives = 64/117 (54.70%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            ++ KIN AVFP  Q GPHN+ I  L VAL Q   P +K Y  QV   ++  A  L  KGY L   GT+NHL+L +L+   + G++V KV E      N+N   GD     PGG + G
Sbjct:  275 FDAKINSAVFPALQSGPHNNKIGALAVALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIG 391

HSP 2 Score: 35.8094 bits (81), Expect = 1.508e-24
Identity = 14/34 (41.18%), Postives = 23/34 (67.65%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP +TSRG VE+DF K+ E+   +V + L ++ +
Sbjct:  392 TPAMTSRGLVEKDFEKIGEFLHRAVTITLDIQEQ 425

[Close]

BLAST of HO065506 vs. TAIR peptide
Match: AT1G36370.1 (| Symbols: SHM7 | serine hydroxymethyltransferase 7 | chr1:13696240-13698576 REVERSE LENGTH=598)

HSP 1 Score: 88.9669 bits (219), Expect = 7.211e-20
Identity = 50/116 (43.10%), Postives = 61/116 (52.59%), Query Frame = -1

Query:  108 EDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 455
            E+KIN AVFP  QGGPHN+ I  L +AL Q  TPEYKAY  Q+   +   A  L  +   L  GGT+NHL+L +L    + G    KV E      NK    GD     PGG + G
Sbjct:  407 EEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYIQQMKKNAQALAAALLRRKCRLVTGGTDNHLLLWDLTPMGLTGKVYEKVCEMCHITLNKTAIFGDNGTISPGGVRIG 522

HSP 2 Score: 24.6386 bits (52), Expect = 7.211e-20
Identity = 9/34 (26.47%), Postives = 19/34 (55.88%), Query Frame = -3

Query:    4 TPXLTSRGFVEEDFVKVXEYFDASVNLALKVKXE 105
            TP +T+RG +E DF  + ++   +  +   ++ E
Sbjct:  523 TPAMTTRGCIESDFETMADFLIKAAQITSALQRE 556

[Close]

BLAST of HO065506 vs. TAIR peptide
Match: AT1G22020.1 (| Symbols: SHM6 | serine hydroxymethyltransferase 6 | chr1:7754599-7757087 FORWARD LENGTH=599)

HSP 1 Score: 85.1149 bits (209), Expect = 1.816e-17
Identity = 47/117 (40.17%), Postives = 62/117 (52.99%), Query Frame = -1

Query:  108 YEDKINQAVFPGXQGGPHNHTIIGLXVALXQAXTPEYKAYQXQVFXXSSKFAQTLSEKGYELXXGGTENHLVLXNLKXKXIDGSRVXKVLESVXXAANKNXXPGDVFXXVPGGXQDG 458
            +E+KIN +VFP  QGGPHN+ I  L +AL QA +PEYK Y  QV   +   A  L  +  +L  GGT+NHL+L +L    + G    KV E      NK     +     PGG + G
Sbjct:  410 FEEKINFSVFPSLQGGPHNNHIAALAIALKQAASPEYKLYMRQVKKNAKALASALISRKCKLITGGTDNHLLLWDLTPLGLTGKVYEKVCEMCHITVNKVAIFSENGVISPGGVRIG 526

The following BLAST results are available for this feature:

BLAST of HO065506 vs. SwissProt
BLAST of HO065506 vs. TrEMBL
BLAST of HO065506 vs. TAIR peptide

BLAST of HO065506 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
GLYM_PEA	8.205e-54	74.36	Serine hydroxymethyltransferase, mitochondrial OS=...	[more]
GLYM_SOLTU	4.375e-52	73.50	Serine hydroxymethyltransferase, mitochondrial OS=...	[more]
GLYM_ARATH	3.646e-51	71.79	Serine hydroxymethyltransferase, mitochondrial OS=...	[more]
GLYM_FLAPR	2.530e-49	71.79	Serine hydroxymethyltransferase 1, mitochondrial O...	[more]
GLYN_FLAPR	1.241e-48	71.79	Serine hydroxymethyltransferase 2, mitochondrial O...	[more]
GLYM_NEUCR	8.273e-34	54.92	Putative serine hydroxymethyltransferase, mitochon...	[more]
GLYM_BOVIN	1.829e-33	50.43	Serine hydroxymethyltransferase, mitochondrial OS=...	[more]
GLYM_CANGA	5.263e-33	50.43	Serine hydroxymethyltransferase, mitochondrial OS=...	[more]
GLYM_RABIT	3.341e-32	51.28	Serine hydroxymethyltransferase, mitochondrial OS=...	[more]
GLYM_HUMAN	3.341e-32	51.28	Serine hydroxymethyltransferase, mitochondrial OS=...	[more]

BLAST of HO065506 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A9YWS0_MEDTR	5.315e-54	75.21	Serine hydroxymethyltransferase OS=Medicago trunca...	[more]
C6ZJZ0_SOYBN	2.365e-51	74.36	Serine hydroxymethyltransferase OS=Glycine max PE=...	[more]
D7T5C1_VITVI	4.018e-51	74.36	Whole genome shotgun sequence of line PN40024, sca...	[more]
B2BGS6_OLEEU	5.298e-51	73.50	Glycine/serine hydroxymethyltransferase reductase ...	[more]
C6ZJY8_SOYBN	8.899e-51	73.50	Serine hydroxymethyltransferase OS=Glycine max PE=...	[more]
D7M9M1_ARALY	1.512e-50	72.65	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
A9PL05_POPTM	1.971e-50	75.21	Serine hydroxymethyltransferase OS=Populus tremulo...	[more]
A9PJ09_9ROSI	1.971e-50	75.21	Serine hydroxymethyltransferase OS=Populus trichoc...	[more]
B9HK13_POPTR	1.971e-50	75.21	Serine hydroxymethyltransferase (Fragment) OS=Popu...	[more]
B9GN69_POPTR	1.971e-50	74.36	Serine hydroxymethyltransferase OS=Populus trichoc...	[more]

BLAST of HO065506 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT4G37930.1	4.241e-52	71.79	\| Symbols: SHM1, STM, SHMT1 \| serine transhydroxym...	[more]
AT5G26780.1	1.596e-51	71.79	\| Symbols: SHM2 \| serine hydroxymethyltransferase ...	[more]
AT5G26780.2	9.214e-49	63.91	\| Symbols: SHM2 \| serine hydroxymethyltransferase ...	[more]
AT5G26780.3	9.214e-49	63.91	\| Symbols: SHM2 \| serine hydroxymethyltransferase ...	[more]
AT4G32520.2	8.182e-30	50.00	\| Symbols: SHM3 \| serine hydroxymethyltransferase ...	[more]
AT4G32520.1	8.182e-30	50.00	\| Symbols: SHM3, AtSHMT3 \| serine hydroxymethyltra...	[more]
AT4G13930.1	1.317e-26	46.15	\| Symbols: SHM4 \| serine hydroxymethyltransferase ...	[more]
AT4G13890.1	1.508e-24	41.88	\| Symbols: SHM5, EDA36, EDA37 \| Pyridoxal phosphat...	[more]
AT1G36370.1	7.211e-20	43.10	\| Symbols: SHM7 \| serine hydroxymethyltransferase ...	[more]
AT1G22020.1	1.816e-17	40.17	\| Symbols: SHM6 \| serine hydroxymethyltransferase ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 10..23 score: NAcoord: 27..30 score
None	No IPR available	SEG	seg	seg	coord: 13..25 score
None	No IPR available	SEG	seg	seg	coord: 17..29 score
None	No IPR available	SEG	seg	seg	coord: 73..80 score: NAcoord: 101..114 score: NAcoord: 119..128 score
IPR001085	Serine hydroxymethyltransferase	PANTHER	PTHR11680	SERINE HYDROXYMETHYLTRANSFERASE	coord: 20..53 score: 2.8
IPR001085	Serine hydroxymethyltransferase	PANTHER	PTHR11680	SERINE HYDROXYMETHYLTRANSFERASE	coord: 1..113 score: 1.3
IPR001085	Serine hydroxymethyltransferase	PFAM	PF00464	SHMT	coord: 2..115 score: 7.3
IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GENE3D	3.90.1150.10	no description	coord: 20..52 score: 0.0
IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GENE3D	3.90.1150.10	no description	coord: 8..113 score: 2.4
IPR015424	Pyridoxal phosphate-dependent transferase, major domain	SUPERFAMILY	53383	PLP-dependent transferases	coord: 1..113 score: 4.8

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO065506 ID=HO065506; Name=HO065506; organism=Cicer arietinum; type=EST; length=461bp
GNTCTCTGNCTTAACCTTCAAAGCCAGATTGACAGATGCATCAAAATACT
CTGNGACCTTAACGAAATCCTCCTCAACAAATCCTCTTGAAGTAAGANCA
GGAGTTTCCCATCCTGGNNGCCCCCGGGAACCANAGNAAAAACATCTCCN
GGAANAGNGTTTTTATTAGCTGCAANANGGACNGATTCCAACACCTTNTC
AACTCTGGAGCCATCAATGNCCTTGNTCTTCAGATTCNCCAAAACTAGAT
GATTCTCAGTTCCGCCANAAANAAGCTCATAGCCTTTTTCACTCAGAGTC
TGNGCAAATTTTGAGGAANTGNTGAAAACCTGNTCTTGATATGCTTTATA
CTCTGGAGTTGNAGCCTGNTTCAACGCAACAGNTAAACCAATAATGGTAT
GGTTGTGAGGACCACCTTGCANTCCGGGGAAAACAGCCTGATTGATTTTG
TCCTCATAGNC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004372	glycine hydroxymethyltransferase activity
GO:0003824	catalytic activity
GO:0030170	pyridoxal phosphate binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006544	glycine metabolic process
GO:0006563	L-serine metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR001085	Ser_HO-MeTrfase
IPR015422	PyrdxlP-dep_Trfase_small
IPR015424	PyrdxlP-dep_Trfase

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