GR393145
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR393145 vs. TrEMBL
Match: C6THQ8_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.005e-18 Identity = 53/89 (59.55%), Postives = 61/89 (68.54%), Query Frame = -2 Query: 196 MKHGADNGTIISEQKVKFFFHQFIALYLEHSGFSKTLKKFIFEGKIEKDNTEGLSVDLEEMCRKFLETC-NDGKSTINGQKEQVAGVHS 459 MKH DNG SE KV HQ IA YL+HSGFSKTLKKF E + EK++ +G VDLEEMC K+ E C D KS +N Q EQVAGV+S Sbjct: 1 MKH-TDNGAFNSEHKV--LLHQSIARYLKHSGFSKTLKKFRSEAQFEKNDLKGSPVDLEEMCLKYFEICGKDAKSNLNDQNEQVAGVNS 86
BLAST of GR393145 vs. TrEMBL
Match: D7SQG0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_52.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029286001 PE=4 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.742e-11 Identity = 41/99 (41.41%), Postives = 57/99 (57.58%), Query Frame = -2 Query: 214 TLFSFTPRQVFLNTPTMKHGADNGT-IISEQKVKFFFHQFIALYLEHSGFSKTLKKFIFEGKIEKDNTEGLSVDLEEMCRKFLETCNDGKSTINGQKEQ 507 +L +F PR V L+ M + ++ + ++ + K H I YL+ SGFSKTLK F E +E DN G S+DLEE+ K LETC+D + N KEQ Sbjct: 9 SLTAFKPRSVMLSNQAMNNLSNKTSKTLNPCQKKTLLHSSILHYLQRSGFSKTLKYFQREAPLENDNGNGCSLDLEEVYYKSLETCDDASTNWNNCKEQ 107
BLAST of GR393145 vs. TrEMBL
Match: A5C3Y6_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_015753 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.802e-10 Identity = 40/99 (40.40%), Postives = 57/99 (57.58%), Query Frame = -2 Query: 214 TLFSFTPRQVFLNTPTMKHGADNGT-IISEQKVKFFFHQFIALYLEHSGFSKTLKKFIFEGKIEKDNTEGLSVDLEEMCRKFLETCNDGKSTINGQKEQ 507 +L +F PR V L+ M + ++ + ++ + K H I YL+ SGFSKTLK F E +E DN G S+DLEE+ K LETC++ + N KEQ Sbjct: 438 SLTAFKPRSVMLSNQAMNNLSNKTSKTLNPCQKKTLLHSSILHYLQRSGFSKTLKYFQREAPLENDNGNGCSLDLEEVYYKSLETCDNASTNWNNCKEQ 536
BLAST of GR393145 vs. TrEMBL
Match: B9RWZ8_RICCO (Cylicin-2, putative OS=Ricinus communis GN=RCOM_1708080 PE=4 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 9.254e-7 Identity = 38/105 (36.19%), Postives = 53/105 (50.48%), Query Frame = -2 Query: 214 TLFSFTPRQVFL--NTPTMKHGADNGT-----IISEQKVKFFFHQFIALYLEHSGFSKTLKKFIFEGKIEKDNTEGLSVDLEEMCRKFLETCNDGKSTINGQKEQ 507 ++ +F PRQV L P D+G+ +I + + K IA YLE SGFSKT+KKF E +I+KD+ S DL+EM K L+ N + Q Sbjct: 15 SILAFKPRQVLLLSKPPASSMKLDDGSNNNDKLILKPEQKTLLLNSIAQYLERSGFSKTVKKFRSEARIQKDDLIESSFDLQEMFIKILDMRNHANKNSKSHRVQ 119
BLAST of GR393145 vs. TAIR peptide
Match: AT5G57120.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink). | chr5:23122767-23124400 REVERSE LENGTH=330) HSP 1 Score: 51.9878 bits (123), Expect = 2.415e-7 Identity = 46/156 (29.49%), Postives = 70/156 (44.87%), Query Frame = -2 Query: 1 GADNGTIISEQKVKFFFHQFIALYLEHSGFSKTLKKFIFEGKIEKDNTEGLSVDLEEMCRKFLETCNDGKSTINGQKEQVAGVHSXXXXXXXXXXXXXXXKLVFEAADNM------EDNQLESLPMVPENKVKDDLFTDAKVENGAETEKQSKRKT 450 G ++ T E + K + +A YLE GFSK KK + E +IEK DLEE+ +FL D ++ NG E V EA +N+ + N+ + + E KVK+ TDA +E+G + EK+ K++T Sbjct: 2 GNESKTSALESEQKALLLRSVAQYLERCGFSKCFKKLLSEAEIEKKELNTSLPDLEEIFSEFLNK-RDHEAAANGNTE----------------------ANVVEAVENVKKDKKKKKNKETKVEVTEEEKVKE---TDAVIEDGVK-EKKKKKET 130 The following BLAST results are available for this feature:
BLAST of GR393145 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 4
BLAST of GR393145 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR393145 ID=GR393145; Name=GR393145; organism=Cicer arietinum; type=EST; length=544bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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