HO067860

EST Overview
NameHO067860
Unique NameHO067860
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length550
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO067860 vs. TrEMBL
Match: B9S836_RICCO (Calcium ion binding protein, putative OS=Ricinus communis GN=RCOM_0958730 PE=4 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.318e-64
Identity = 133/185 (71.89%), Postives = 139/185 (75.14%), Query Frame = 2
Query:    2 EHDLLD----VGGQSDEVEEGVENARWXXXXXXXXXXXXXXXXXXXXXXXVDAVDNFSEATSIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVILIVCIVMGVFASFRTVFPLWTSILAILLYPFSLVLVYVLDYVFGWS 544
            EH LL     +  QSDEV EGVEN RW                       VDAVDNFS+ATSIP FFISFI LPLATNSSEAVSAIIFASR   +TASLTFSE+YGAVTMNN+LCLSVFLALVY RGLTWDFSSEVLVI IVCIVMG FASFRT FPLWTS +A  LYPFSL LVYVLDYVFGWS
Sbjct:  359 EHTLLGPEERIEDQSDEVVEGVENPRWISFKAVLMLLLGTIIAAVFADPLVDAVDNFSDATSIPTFFISFIALPLATNSSEAVSAIIFASRKTLRTASLTFSELYGAVTMNNLLCLSVFLALVYCRGLTWDFSSEVLVIFIVCIVMGAFASFRTTFPLWTSSIAYFLYPFSLALVYVLDYVFGWS 543          
BLAST of HO067860 vs. TrEMBL
Match: A5BAN3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042742 PE=4 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 5.185e-61
Identity = 118/135 (87.41%), Postives = 125/135 (92.59%), Query Frame = 2
Query:  140 VDAVDNFSEATSIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVILIVCIVMGVFASFRTVFPLWTSILAILLYPFSLVLVYVLDYVFGWS 544
            VDAVDNFS+ATSIP FFISFI LPLATNSSEAVSAIIFASR K +T SLTFSE+YGAVTMNNVLCLSVFLALVY RGLTWDFSSEVLVI+IVC+VMGVFASFRT FPLWTS +A+LLYPFSL LVYVLDYV GWS
Sbjct:   18 VDAVDNFSDATSIPTFFISFIALPLATNSSEAVSAIIFASRKKNRTTSLTFSELYGAVTMNNVLCLSVFLALVYVRGLTWDFSSEVLVIVIVCVVMGVFASFRTTFPLWTSFVALLLYPFSLALVYVLDYVLGWS 152          
BLAST of HO067860 vs. TrEMBL
Match: B9GGG0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_707778 PE=4 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 9.778e-60
Identity = 123/172 (71.51%), Postives = 129/172 (75.00%), Query Frame = 2
Query:   29 QSDEVEEGVENARWXXXXXXXXXXXXXXXXXXXXXXXVDAVDNFSEATSIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVILIVCIVMGVFASFRTVFPLWTSILAILLYPFSLVLVYVLDYVFGWS 544
            +  E + GV+N RW                       VDAVDNFS+ATSIP FFISFI LPLATNSSEAVSAIIFASR K  TASLTFSE+YGAVTMNNVLCLSVFLALVY R LTWDFS+EVLVI IVCIVMG FASFRT FPLWT  LA  LYPFSLVLVYVLDYV GWS
Sbjct:  420 EEGESDGGVKNPRWTSFKASLMLLAGAVIAAAFADPLVDAVDNFSDATSIPTFFISFIALPLATNSSEAVSAIIFASRKKVTTASLTFSELYGAVTMNNVLCLSVFLALVYFRELTWDFSAEVLVICIVCIVMGAFASFRTTFPLWTCFLAYFLYPFSLVLVYVLDYVLGWS 591          
BLAST of HO067860 vs. TrEMBL
Match: D0VLU2_9POAL (P20Sh148J07 OS=Saccharum hybrid cultivar R570 GN=Sh148J07_20 PE=4 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.412e-58
Identity = 118/182 (64.84%), Postives = 135/182 (74.18%), Query Frame = 2
Query:    2 EHD-LLDVGGQSDEVEEGVENARWXXXXXXXXXXXXXXXXXXXXXXXVDAVDNFSEATSIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVILIVCIVMGVFASFRTVFPLWTSILAILLYPFSLVLVYVLDYVFGWS 544
            EHD L+D   +SDE  E VEN  W                       VDAV NFS AT IP+FFISFI LPLATNSSEAVSAIIFASR K++T+SLTFSE+YG VTMNN LCL VFLAL+Y R LTWDFSSEVL+IL+VC+VM +F SFRT FPLWT ++A +LYPFSLV+VY+LDYVFGWS
Sbjct:  385 EHDQLID---RSDEAVESVENPGWCITKAVALLLLGAAIAAAFADPLVDAVHNFSNATHIPSFFISFIALPLATNSSEAVSAIIFASRKKQRTSSLTFSEVYGGVTMNNTLCLGVFLALIYFRNLTWDFSSEVLIILLVCVVMALFTSFRTTFPLWTCLVAYMLYPFSLVIVYILDYVFGWS 563          
BLAST of HO067860 vs. TrEMBL
Match: Q5QNI2_ORYSJ (Os01g0212400 protein OS=Oryza sativa subsp. japonica GN=P0031E09.40 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 9.152e-58
Identity = 115/181 (63.54%), Postives = 133/181 (73.48%), Query Frame = 2
Query:    2 EHDLLDVGGQSDEVEEGVENARWXXXXXXXXXXXXXXXXXXXXXXXVDAVDNFSEATSIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVILIVCIVMGVFASFRTVFPLWTSILAILLYPFSLVLVYVLDYVFGWS 544
            EHDLL    +SDE  E VEN  W                       VDAV NFS A+ IP+FFISFI LPLATNSSEAVSAIIFASR K +T+SLTFSE+YG VTMNN LCL VFLAL+Y R LTWDFSSEVL+IL+VC++MG+F SFRT FPLWT ++A +LYP SLV+VY+LD+VFGWS
Sbjct:  406 EHDLLV--DRSDETVESVENPGWCITKAVGLLLLGSAIAAAFADPLVDAVHNFSNASHIPSFFISFIALPLATNSSEAVSAIIFASRKKLRTSSLTFSEVYGGVTMNNTLCLGVFLALIYIRNLTWDFSSEVLIILLVCVIMGLFTSFRTTFPLWTCLVAYMLYPLSLVVVYILDFVFGWS 584          
BLAST of HO067860 vs. TrEMBL
Match: B8AAM8_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00872 PE=4 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 9.152e-58
Identity = 115/181 (63.54%), Postives = 133/181 (73.48%), Query Frame = 2
Query:    2 EHDLLDVGGQSDEVEEGVENARWXXXXXXXXXXXXXXXXXXXXXXXVDAVDNFSEATSIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVILIVCIVMGVFASFRTVFPLWTSILAILLYPFSLVLVYVLDYVFGWS 544
            EHDLL    +SDE  E VEN  W                       VDAV NFS A+ IP+FFISFI LPLATNSSEAVSAIIFASR K +T+SLTFSE+YG VTMNN LCL VFLAL+Y R LTWDFSSEVL+IL+VC++MG+F SFRT FPLWT ++A +LYP SLV+VY+LD+VFGWS
Sbjct:  406 EHDLLV--DRSDETVESVENPGWCITKAVGLLLLGSAIAAAFADPLVDAVHNFSNASHIPSFFISFIALPLATNSSEAVSAIIFASRKKLRTSSLTFSEVYGGVTMNNTLCLGVFLALIYIRNLTWDFSSEVLIILLVCVIMGLFTSFRTTFPLWTCLVAYMLYPLSLVVVYILDFVFGWS 584          
BLAST of HO067860 vs. TrEMBL
Match: D0VLU8_9POAL (P20Sh095F0 OS=Saccharum hybrid cultivar R570 GN=Sh095F04g_20 PE=4 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.195e-57
Identity = 113/172 (65.70%), Postives = 128/172 (74.42%), Query Frame = 2
Query:   29 QSDEVEEGVENARWXXXXXXXXXXXXXXXXXXXXXXXVDAVDNFSEATSIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVILIVCIVMGVFASFRTVFPLWTSILAILLYPFSLVLVYVLDYVFGWS 544
            +SDE  E VEN  W                       VDAV NFS AT IP+FFISFI LPLATNSSEAVSAIIFASR K++T SLTFSE+YG VTMNN LCL VFLAL+Y R LTWDFSSEVL+IL+VC+VM +F SFRT FPLWT ++A +LYPFSLV+VY+LDYVFGWS
Sbjct:  402 RSDEAVETVENPGWCITKAVALLLLGAAIAAAFADPLVDAVHNFSNATHIPSFFISFIALPLATNSSEAVSAIIFASRKKQRTCSLTFSEVYGGVTMNNTLCLGVFLALIYFRNLTWDFSSEVLIILLVCVVMALFTSFRTTFPLWTCLVAYMLYPFSLVIVYILDYVFGWS 573          
BLAST of HO067860 vs. TrEMBL
Match: D4QD79_DIACA (Sodium/calcium exchanger protein OS=Dianthus caryophyllus GN=DcNCX1 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.561e-57
Identity = 120/181 (66.30%), Postives = 134/181 (74.03%), Query Frame = 2
Query:    2 EHDLLDVGGQSDEVEEGVENARWXXXXXXXXXXXXXXXXXXXXXXXVDAVDNFSEATSIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVILIVCIVMGVFASFRTVFPLWTSILAILLYPFSLVLVYVLDYVFGWS 544
            EH LL  G  ++E  E +EN +                        VDAVDNFS ATSIP+FFISFI LPLATNSSEAVSAIIFASR KR++ASLTFSE+YGA TMNNVLCLSVFLALVY RGL+WDFSSEVLVI +VC +MG   SF+T FPLWT+ +A  LYPFSLVLVYVLDYVFGWS
Sbjct:  403 EHLLL--GEANEEGGEEIENPKKTTIKAVIFLVIGTLIAAAFADPLVDAVDNFSTATSIPSFFISFIALPLATNSSEAVSAIIFASRKKRRSASLTFSELYGAATMNNVLCLSVFLALVYVRGLSWDFSSEVLVIFLVCTIMGALGSFKTSFPLWTASIAFFLYPFSLVLVYVLDYVFGWS 581          
BLAST of HO067860 vs. TrEMBL
Match: C0PL03_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 5.932e-57
Identity = 113/181 (62.43%), Postives = 131/181 (72.38%), Query Frame = 2
Query:    2 EHDLLDVGGQSDEVEEGVENARWXXXXXXXXXXXXXXXXXXXXXXXVDAVDNFSEATSIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVILIVCIVMGVFASFRTVFPLWTSILAILLYPFSLVLVYVLDYVFGWS 544
            EHD  ++  +SDE  E VEN  W                       VDAV  FS AT IP+FFISFI LPLATNSSEAVSAIIFASR K++T SLTFSE+YG VTMNN LCL VFLAL+Y R LTWDFSSEVL+IL+VC+VM +F SFRT FPLWT ++A +LYP SL++VY+LDYVFGWS
Sbjct:  254 EHD--ELVDRSDEAVESVENPGWCIAKAVALLLLGSAAAAAFADPLVDAVHGFSNATRIPSFFISFIALPLATNSSEAVSAIIFASRKKQRTCSLTFSEVYGGVTMNNTLCLGVFLALIYFRNLTWDFSSEVLIILLVCVVMALFTSFRTTFPLWTCLVAYMLYPLSLIIVYILDYVFGWS 432          
BLAST of HO067860 vs. TrEMBL
Match: C0P2K9_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 5.932e-57
Identity = 113/181 (62.43%), Postives = 131/181 (72.38%), Query Frame = 2
Query:    2 EHDLLDVGGQSDEVEEGVENARWXXXXXXXXXXXXXXXXXXXXXXXVDAVDNFSEATSIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVILIVCIVMGVFASFRTVFPLWTSILAILLYPFSLVLVYVLDYVFGWS 544
            EHD  ++  +SDE  E VEN  W                       VDAV  FS AT IP+FFISFI LPLATNSSEAVSAIIFASR K++T SLTFSE+YG VTMNN LCL VFLAL+Y R LTWDFSSEVL+IL+VC+VM +F SFRT FPLWT ++A +LYP SL++VY+LDYVFGWS
Sbjct:  309 EHD--ELVDRSDEAVESVENPGWCIAKAVALLLLGSAAAAAFADPLVDAVHGFSNATRIPSFFISFIALPLATNSSEAVSAIIFASRKKQRTCSLTFSEVYGGVTMNNTLCLGVFLALIYFRNLTWDFSSEVLIILLVCVVMALFTSFRTTFPLWTCLVAYMLYPLSLIIVYILDYVFGWS 487          
BLAST of HO067860 vs. TAIR peptide
Match: AT1G53210.1 (| Symbols: | sodium/calcium exchanger family protein / calcium-binding EF hand family protein | chr1:19844790-19847533 FORWARD LENGTH=585)

HSP 1 Score: 219.935 bits (559), Expect = 6.850e-58
Identity = 117/183 (63.93%), Postives = 133/183 (72.68%), Query Frame = 2
Query:    2 EHDLL--DVGGQSDEVEEGVENARWXXXXXXXXXXXXXXXXXXXXXXXVDAVDNFSEATSIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVILIVCIVMGVFASFRTVFPLWTSILAILLYPFSLVLVYVLDYVFGWS 544
            EH LL  +  G++DE    V + +W                       VD V+NFS AT IP+FFISFI LPLATNSSEAVSAIIFASR K +TASLTFSE+ G VTMNN+LCLSVFLA+VY RGLTW+FSSEVLVILIVC+VMG FASFRT +PLWT  +A LLYPFSL LVY+LDY FGWS
Sbjct:  403 EHALLGDNENGENDEEGGEVADPKWITIKAALLLLLGAAIAAAFADPLVDTVNNFSAATGIPSFFISFIALPLATNSSEAVSAIIFASRKKIRTASLTFSELCGGVTMNNILCLSVFLAIVYVRGLTWNFSSEVLVILIVCLVMGGFASFRTTYPLWTCFIAYLLYPFSLGLVYILDYWFGWS 585          
BLAST of HO067860 vs. TAIR peptide
Match: AT1G29025.1 (| Symbols: | Calcium-binding EF-hand family protein | chr1:10124524-10126875 REVERSE LENGTH=578)

HSP 1 Score: 120.553 bits (301), Expect = 5.656e-28
Identity = 56/124 (45.16%), Postives = 87/124 (70.16%), Query Frame = 2
Query:  149 VDNFSEATSIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVILIVCIVMGVFASFRTVFPLWTSILAILLYPFSLVLVYV 520
            ++  S +  +P+F++ F  +PLA N   A+SA     ++K +  S TFSEIY  VT+NN+L +++ LA+VY RGLTWD+S+EVL+I+IV +++GV A  R+ +P W  +LA  LY FSL+L+Y+
Sbjct:  447 IELLSVSAGVPSFYVVFAVIPLARNLKNALSAHFCRKKEKAKITSDTFSEIYRDVTLNNLLGITIILAIVYIRGLTWDYSTEVLIIVIVGLIIGVPAYVRSTYPFWICVLAFALYFFSLILIYL 570          
BLAST of HO067860 vs. TAIR peptide
Match: AT1G29020.1 (| Symbols: | Calcium-binding EF-hand family protein | chr1:10120497-10122902 REVERSE LENGTH=564)

HSP 1 Score: 117.472 bits (293), Expect = 4.788e-27
Identity = 56/119 (47.06%), Postives = 83/119 (69.75%), Query Frame = 2
Query:  161 SEATSIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVILIVCIVMGVFASFRTVFPLWTSILAILLYPFSLVLVY 517
            SE+  +P+F++ F+ +PLA N    +SA     +DK +  S TFSEIY  VTMNN++ +S+ LA+VYAR L WD+++EVL+I+IV +++G+ A  RT +P W  +LA  LY  SLV+VY
Sbjct:  430 SESAGVPSFYVVFVVIPLARNLKNTLSAHFCRKKDKAKITSDTFSEIYKDVTMNNLMGISIILAIVYARELVWDYTTEVLIIVIVGLLIGLPAYVRTTYPFWICLLAFALYFISLVVVY 548          
BLAST of HO067860 vs. TAIR peptide
Match: AT2G34030.1 (| Symbols: | Calcium-binding EF-hand family protein | chr2:14375086-14377364 REVERSE LENGTH=566)

HSP 1 Score: 112.464 bits (280), Expect = 1.540e-25
Identity = 52/120 (43.33%), Postives = 80/120 (66.67%), Query Frame = 2
Query:  161 SEATSIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVILIVCIVMGVFASFRTVFPLWTSILAILLYPFSLVLVYV 520
            S +  IP+F+I F  +P A N    +S      +DK++ +S TFSEIY  +TMNN+L +SV LA+VY RGLTW +S E L+++IV +++G+    R+ +P W  +LA  +Y FSL+L+Y+
Sbjct:  439 SISAGIPSFYIVFAMIPFARNLKNTLSTRFCRGKDKKRVSSNTFSEIYKDITMNNLLGMSVILAIVYTRGLTWKYSVETLIMVIVGLIIGLPIYIRSTYPFWMCVLAFAMYFFSLLLIYI 558          
BLAST of HO067860 vs. TAIR peptide
Match: AT2G34020.1 (| Symbols: | Calcium-binding EF-hand family protein | chr2:14371292-14373703 REVERSE LENGTH=610)

HSP 1 Score: 107.842 bits (268), Expect = 3.794e-24
Identity = 52/128 (40.62%), Postives = 83/128 (64.84%), Query Frame = 2
Query:  161 SEATSIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVILIVCIVMGVFASFRTVFPLWTSILAILLYPFSLVLVYVLDYVFGWS 544
            S +  +P+F+  F  +PL  N    +SA     +DK + AS  FSEIY  VTMNN++ +S+ LA+VY+RGL W++S E L++++V I +G+ A  R+ +P W  ++A  +Y FSLVL+Y+  ++ G S
Sbjct:  483 SVSAGVPSFYSVFAVIPLVRNLKNTLSAHFCRKKDKARIASEKFSEIYRDVTMNNLMGMSITLAIVYSRGLKWEYSIESLLVVVVGIAIGLPAYVRSTYPFWICVMAFAMYIFSLVLIYIHFHLRGQS 610          
The following BLAST results are available for this feature:
BLAST of HO067860 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9S836_RICCO1.318e-6471.89Calcium ion binding protein, putative OS=Ricinus c... [more]
A5BAN3_VITVI5.185e-6187.41Putative uncharacterized protein OS=Vitis vinifera... [more]
B9GGG0_POPTR9.778e-6071.51Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D0VLU2_9POAL1.412e-5864.84P20Sh148J07 OS=Saccharum hybrid cultivar R570 GN=S... [more]
Q5QNI2_ORYSJ9.152e-5863.54Os01g0212400 protein OS=Oryza sativa subsp. japoni... [more]
B8AAM8_ORYSI9.152e-5863.54Putative uncharacterized protein OS=Oryza sativa s... [more]
D0VLU8_9POAL1.195e-5765.70P20Sh095F0 OS=Saccharum hybrid cultivar R570 GN=Sh... [more]
D4QD79_DIACA1.561e-5766.30Sodium/calcium exchanger protein OS=Dianthus caryo... [more]
C0PL03_MAIZE5.932e-5762.43Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
C0P2K9_MAIZE5.932e-5762.43Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
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BLAST of HO067860 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G53210.16.850e-5863.93| Symbols: | sodium/calcium exchanger family prot... [more]
AT1G29025.15.656e-2845.16| Symbols: | Calcium-binding EF-hand family prote... [more]
AT1G29020.14.788e-2747.06| Symbols: | Calcium-binding EF-hand family prote... [more]
AT2G34030.11.540e-2543.33| Symbols: | Calcium-binding EF-hand family prote... [more]
AT2G34020.13.794e-2440.63| Symbols: | Calcium-binding EF-hand family prote... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004837Sodium/calcium exchanger membrane regionPFAMPF01699Na_Ca_excoord: 38..170
score: 5.2
NoneNo IPR availableSEGsegsegcoord: 24..46
score
NoneNo IPR availableSEGsegsegcoord: 10..23
score
NoneNo IPR availableSEGsegsegcoord: 120..136
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO067860 ID=HO067860; Name=HO067860; organism=Cicer arietinum; type=EST; length=550bp
GGAACACGATCTTCTGGACGTGGGGGGTCAGAGTGATGAAGTCGAAGAGG
GTGTTGAGAATGCTAGATGGATTTCCATAAAAGCAGTACTGCTTCTTCTG
CTGGGTGCTATTATTGCAGCTGCATTTGCTGATCCTCTGGTTGATGCTGT
CGATAACTTTTCTGAAGCTACAAGTATTCCAGCTTTCTTCATTTCCTTCA
TTTTTCTACCTCTTGCAACCAATTCAAGTGAAGCAGTATCAGCAATAATT
TTCGCTAGTCGTGATAAGAGGCAAACAGCTTCATTAACATTTTCTGAGAT
ATATGGTGCAGTAACAATGAACAATGTGCTATGCCTATCGGTTTTTTTGG
CGCTTGTATATGCGAGGGGATTGACATGGGACTTCTCTTCAGAAGTGTTG
GTTATTCTCATCGTGTGCATTGTCATGGGCGTCTTCGCCAGTTTCCGTAC
TGTTTTCCCTCTATGGACATCTATACTGGCTATCCTACTTTATCCCTTCT
CCCTAGTATTGGTGTATGTTCTTGATTATGTATTTGGGTGGTCATAGATC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: INTERPRO
TermDefinition
IPR004837NaCa_Exmemb