GR400432

EST Overview
NameGR400432
Unique NameGR400432
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length218
Libraries
Library NameType
LIBEST_024783 ICC4958 Slow drought stresses root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR400432 vs. TrEMBL
Match: C9YEF0_9BURK (Putative uncharacterized protein OS=Curvibacter putative symbiont of Hydra magnipapillata GN=Csp_D29560 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.675e-11
Identity = 33/43 (76.74%), Postives = 36/43 (83.72%), Query Frame = 3
Query:   84 GYPIQKSPEQSKFASSPKLNTGYHVLRRRKSPRHPPHALNHLT 212
            G+PI+KSP+QS FASSPKL  GYHVLRR   PRHPPHAL HLT
Sbjct:  125 GFPIRKSPDQSLFASSPKLIAGYHVLRRLSLPRHPPHALIHLT 167          
BLAST of GR400432 vs. TrEMBL
Match: A7BNW4_9GAMM (Putative uncharacterized protein OS=Beggiatoa sp. SS GN=BGS_1412 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.327e-8
Identity = 29/44 (65.91%), Postives = 33/44 (75.00%), Query Frame = 3
Query:   84 GYPIQKSPEQSKFASSPKLNTGYHVLRRRKSPRHPPHALNHLTP 215
            G+PI+KSP+Q+ FA SPKL   YHVL R  SPRHPP ALN L P
Sbjct:   24 GFPIRKSPDQNLFADSPKLIADYHVLHRLLSPRHPPCALNSLDP 67          
BLAST of GR400432 vs. TrEMBL
Match: B1N6K0_9PROT (Putative uncharacterized protein OS=uncultured beta proteobacterium CBNPD1 BAC clone 578 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.602e-8
Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 2
Query:   68 DSSRRGLPHSKISGTKQICQLPKT*HRLSRPSTPEITKASTTCS 199
            D+   G PHS+ISG+K ICQLP+   RLSRPS+P I KASTTC+
Sbjct:    6 DTLAGGFPHSEISGSKLICQLPEAYRRLSRPSSPVIAKASTTCT 49          
BLAST of GR400432 vs. TrEMBL
Match: B9P7X8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_680477 PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.282e-7
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 2
Query:   68 DSSRRGLPHSKISGTKQICQLPKT*HRLSRPSTPEITKASTTCS 199
            D+   G PHS+ISG+K ICQLP+   RLSR S+P I KASTTCS
Sbjct:    6 DTLAGGFPHSEISGSKLICQLPEAYRRLSRLSSPIIAKASTTCS 49          
The following BLAST results are available for this feature:
BLAST of GR400432 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
C9YEF0_9BURK1.675e-1176.74Putative uncharacterized protein OS=Curvibacter pu... [more]
A7BNW4_9GAMM1.327e-865.91Putative uncharacterized protein OS=Beggiatoa sp. ... [more]
B1N6K0_9PROT8.602e-863.64Putative uncharacterized protein OS=uncultured bet... [more]
B9P7X8_POPTR7.282e-763.64Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
back to top
Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR400432 ID=GR400432; Name=GR400432; organism=Cicer arietinum; type=EST; length=218bp
CCCACAAACTACGGAAATGTTGCAATCCACCCGGTTAGCCACAATGACCA
ATGAACTCAATCAAAGTGACTCCTCGCGGAGGGGGTTACCCCATTCAAAA
ATCTCCGGAACAAAGCAAATTTGCCAGCTCCCCAAAACTTAACACAGGCT
ATCACGTCCTTCGACGCCGGAAATCACCAAGGCATCCACCACATGCTCTA
AATCACTTGACCCCCCGA
back to top