GR397562

EST Overview
NameGR397562
Unique NameGR397562
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length206
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
[Close]
BLAST of GR397562 vs. TrEMBL
Match: C6T3T3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.593e-9
Identity = 30/35 (85.71%), Postives = 34/35 (97.14%), Query Frame = -2 
Query:  101 NEGSIKRRNEKKRVKQRYAFILAEKKKRKAQMQEA 205
            NEGS+KRRNEKKR++QR AFILAEKKKRKAQ+QEA
Sbjct:  103 NEGSVKRRNEKKRMRQRRAFILAEKKKRKAQLQEA 137
[Close]
BLAST of GR397562 vs. TrEMBL
Match: C6T3P1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.593e-9
Identity = 30/35 (85.71%), Postives = 34/35 (97.14%), Query Frame = -2 
Query:  101 NEGSIKRRNEKKRVKQRYAFILAEKKKRKAQMQEA 205
            NEGS+KRRNEKKR++QR AFILAEKKKRKAQ+QEA
Sbjct:  103 NEGSVKRRNEKKRMRQRRAFILAEKKKRKAQLQEA 137
[Close]
BLAST of GR397562 vs. TrEMBL
Match: C6SVP3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.691e-8
Identity = 29/35 (82.86%), Postives = 34/35 (97.14%), Query Frame = -2 
Query:  101 NEGSIKRRNEKKRVKQRYAFILAEKKKRKAQMQEA 205
            NEGS+KRRNEKKR++QR AFILAE+KKRKAQ+QEA
Sbjct:  103 NEGSVKRRNEKKRMRQRRAFILAERKKRKAQLQEA 137
[Close]
BLAST of GR397562 vs. TrEMBL
Match: B9HFB2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_820063 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.096e-7
Identity = 28/35 (80.00%), Postives = 32/35 (91.43%), Query Frame = -2 
Query:  101 NEGSIKRRNEKKRVKQRYAFILAEKKKRKAQMQEA 205
            N GS+KRRNEKKR++QR  FILAEKKKRKAQ+QEA
Sbjct:  111 NVGSVKRRNEKKRIRQRKEFILAEKKKRKAQLQEA 145
[Close]
BLAST of GR397562 vs. TAIR peptide
Match: AT3G51010.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:18946880-18948048 REVERSE LENGTH=188)

HSP 1 Score: 54.6842 bits (130), Expect = 1.405e-8
Identity = 26/35 (74.29%), Postives = 31/35 (88.57%), Query Frame = -2 
Query:  101 NEGSIKRRNEKKRVKQRYAFILAEKKKRKAQMQEA 205
            NEGS+KRRN KKR+ QR AFIL+EKKKR+A +QEA
Sbjct:  112 NEGSVKRRNAKKRIGQRRAFILSEKKKRQALVQEA 146
The following BLAST results are available for this feature:
BLAST of GR397562 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
C6T3T3_SOYBN7.593e-985.71Putative uncharacterized protein OS=Glycine max PE... [more]
C6T3P1_SOYBN7.593e-985.71Putative uncharacterized protein OS=Glycine max PE... [more]
C6SVP3_SOYBN1.691e-882.86Putative uncharacterized protein OS=Glycine max PE... [more]
B9HFB2_POPTR1.096e-780.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of GR397562 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G51010.11.405e-874.29| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 30..45
score
NoneNo IPR availableSEGsegsegcoord: 36..47
score: NAcoord: 49..64
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR397562 ID=GR397562; Name=GR397562; organism=Cicer arietinum; type=EST; length=206bp
CCTCAAGGCGCTGCAATTCAACCAATCTTTCTGCCCACTCTCTTTCCCTT
GCAACTGCAGCCATCTTACGCTCTACCTTCTTAATGTTTTTCTTCCGTTT
AGCCTCCTGCATCTGAGCTTTTCTTTTCTTCTTTTCCGCCAGTATAAAGG
CATAGCGCTGCTTCACGCGTTTCTTCTCATTCCTCCTCTTGATGCTCCCT
TCATTA
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