HO064356

EST Overview


Name	HO064356
Unique Name	HO064356
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	378

Libraries


Library Name	Type
LIBEST_026411 Chickpea drought stressed cDNA SSH library AR2	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO064356 vs. TrEMBL
Match: Q2HTS7_MEDTR (Cig3, related OS=Medicago truncatula GN=MtrDRAFT_AC149801g24v2 PE=4 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 3.622e-11
Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = -3

Query:    2 MATDLSLSTGIHTKEVLLEVGNSEKQLWALVHSKGILHSD 121
            MA++LSLS GI +KEVLLE+GNSEKQLWAL+HSKGILHSD
Sbjct:    1 MASNLSLSPGIRSKEVLLEIGNSEKQLWALIHSKGILHSD 40

The following BLAST results are available for this feature:

BLAST of HO064356 vs. TrEMBL

BLAST of HO064356 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1


Match Name	E-value	Identity	Description
Q2HTS7_MEDTR	3.622e-11	82.50	Cig3, related OS=Medicago truncatula GN=MtrDRAFT_A...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 36..50 score
None	No IPR available	SEG	seg	seg	coord: 33..54 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO064356 ID=HO064356; Name=HO064356; organism=Cicer arietinum; type=EST; length=378bp
CATCTGAGTGCAGAATGCCTTTAGAATGGACCAACGCCCACAACTGCTTT
TCAGAATTACCAACCTCTAAAAGAACTTCTTTAGTATGAATTCCAGTAGA
AAGAGATAGATCAGTTGCCATGGATGAAATTCAAGGGCTTCCTTCAAATA
TAATGCATCTAGTGAAGCAGATATTTTGAGTAAACAATGAAATTCCAGGT
AGCTACTTATCGAAAGGTGTTAGGAGAGAGAAGGGTAGATAGAAGTAGAA
GCGGAGAAAGGAAGAAGGAGGAAGAATTGGACCACCAACAGTGTTTCAGA
TGTGAAACAGACAAAGTAATATGGATTCTATGATGAGGCTCAACCTCCCC
CGCGTACCTGCCCGGGCGGCCGCTCGAA

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