GR400128

EST Overview
NameGR400128
Unique NameGR400128
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length389
Libraries
Library NameType
LIBEST_024783 ICC4958 Slow drought stresses root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR400128 vs. TrEMBL
Match: Q3Y6U9_TOBAC (Putative xylanase Xyn2 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.147e-27
Identity = 56/78 (71.79%), Postives = 68/78 (87.18%), Query Frame = -3
Query:  151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384
            NAHLVNAEGD+NEAGKR+L+LK EWL HSHGH+DEQGQ++F GF+G+Y V+V+T SKKI K FV+DKGD  LV+S DL
Sbjct:  841 NAHLVNAEGDLNEAGKRYLSLKHEWLSHSHGHIDEQGQFSFSGFHGSYEVEVITVSKKITKKFVVDKGDGALVISIDL 918          
BLAST of GR400128 vs. TrEMBL
Match: Q3Y6V0_TOBAC (Putative xylanase Xyn1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.160e-27
Identity = 56/78 (71.79%), Postives = 67/78 (85.90%), Query Frame = -3
Query:  151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384
            NAHLVNAEGDINEAGKR+LALK EWL HSHGH+DEQGQ++F GF+G+Y V+V+T SKKI K FV+DK D  L++S DL
Sbjct:  841 NAHLVNAEGDINEAGKRYLALKHEWLSHSHGHIDEQGQFSFSGFHGSYEVEVITVSKKITKKFVVDKDDGALLISIDL 918          
BLAST of GR400128 vs. TrEMBL
Match: Q5BMA5_9ROSI (Putative endo-1,4-beta-xylanase OS=Populus tremula x Populus tremuloides PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.374e-26
Identity = 55/78 (70.51%), Postives = 68/78 (87.18%), Query Frame = -3
Query:  151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384
            NAH VNAEG++NEAGKR+LALK+EWL  +HGH+DEQGQ+ FRGF+GTY +++ T SKK+ KTFV+DKGD PLVVS DL
Sbjct:  838 NAHPVNAEGELNEAGKRYLALKKEWLSRAHGHIDEQGQFAFRGFHGTYVLEIETVSKKMVKTFVVDKGDSPLVVSIDL 915          
BLAST of GR400128 vs. TrEMBL
Match: B9GNK0_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_411700 PE=4 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.374e-26
Identity = 56/78 (71.79%), Postives = 68/78 (87.18%), Query Frame = -3
Query:  151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384
            NAHLVNAEG++NEAGKR+LALK+EWL  +HG +DEQGQ+ FRGF+GTY +++ T SKKI KTFV+DKGD PLVVS DL
Sbjct:  972 NAHLVNAEGELNEAGKRYLALKKEWLSRTHGCIDEQGQFAFRGFHGTYVLEIETVSKKIMKTFVVDKGDSPLVVSIDL 1049          
BLAST of GR400128 vs. TrEMBL
Match: B9R6T3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1585080 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.050e-26
Identity = 54/78 (69.23%), Postives = 67/78 (85.90%), Query Frame = -3
Query:  151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384
            NAHLVNAEG++NEAGKR+LALK EWL  +HGH++EQG++ FRGF GTY +++ T SKKI KTFV+DKGD P+VVS DL
Sbjct:  173 NAHLVNAEGELNEAGKRYLALKDEWLTRAHGHIEEQGEFTFRGFQGTYKLEINTISKKITKTFVVDKGDSPVVVSIDL 250          
BLAST of GR400128 vs. TrEMBL
Match: Q27U87_EUCGG (Endo-1,4-beta-xylanase (Fragment) OS=Eucalyptus globulus subsp. globulus PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.638e-25
Identity = 52/78 (66.67%), Postives = 66/78 (84.62%), Query Frame = -3
Query:  151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384
            NAHLVNAEGD+NEAGKR+LAL++EW  H+HGHV+EQG+Y FRGF+GTY+V +VT SK+  K+ V+DKG+ PLVV   L
Sbjct:  232 NAHLVNAEGDVNEAGKRYLALRKEWSSHAHGHVNEQGEYTFRGFHGTYDVLIVTSSKRTTKSIVVDKGESPLVVPISL 309          
BLAST of GR400128 vs. TrEMBL
Match: B9R6T1_RICCO (Hydrolase, hydrolyzing O-glycosyl compounds, putative OS=Ricinus communis GN=RCOM_1585060 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.440e-23
Identity = 49/77 (63.64%), Postives = 66/77 (85.71%), Query Frame = -3
Query:  151 AHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 381
            AHLVNA+G IN AGKRFLAL++EWL H++GH++EQG++ FRGF GTYN+++ + SKK+ KT V+D+G+ PLVVS DL
Sbjct:  751 AHLVNADGKINVAGKRFLALRKEWLSHANGHINEQGEFRFRGFRGTYNIEINSSSKKVNKTIVVDQGELPLVVSIDL 827          
BLAST of GR400128 vs. TrEMBL
Match: C5WPQ6_SORBI (Putative uncharacterized protein Sb01g012210 OS=Sorghum bicolor GN=Sb01g012210 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.904e-22
Identity = 46/75 (61.33%), Postives = 60/75 (80.00%), Query Frame = -3
Query:  160 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVS 384
            +AHLV+AEG +NEAG+R L LK+EWL HSHGH DE G+Y FRG +G Y+VDV TP+ K+ +TF +DK D PLV++
Sbjct:  671 DAHLVDAEGQVNEAGRRLLQLKREWLTHSHGHADENGEYKFRGHHGEYHVDVTTPTGKVSQTFTVDKDDAPLVLN 745          
BLAST of GR400128 vs. TrEMBL
Match: Q27U86_EUCGG (Endo-1,4-beta-xylanase (Fragment) OS=Eucalyptus globulus subsp. globulus GN=Xyn2 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.032e-21
Identity = 47/78 (60.26%), Postives = 63/78 (80.77%), Query Frame = -3
Query:  151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384
            NAHLVNAEG +NEAGKR L LK+EWL  +HG V+E+ ++ FRGF+GTY+V+++TP +K+ KT V+DKG  P+ VS DL
Sbjct:   21 NAHLVNAEGGVNEAGKRLLGLKREWLSRAHGLVEEECEFRFRGFHGTYDVEIITPCEKVCKTIVVDKGYGPMEVSIDL 98          
BLAST of GR400128 vs. TrEMBL
Match: D7M8B1_ARALY (Glycosyl hydrolase family 10 protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_489729 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.004e-21
Identity = 43/78 (55.13%), Postives = 64/78 (82.05%), Query Frame = -3
Query:  151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384
            NA+LV  EG++NEAGKRFL +KQEWL H++G +D++ ++ F+G++GTY V+V TP+  + KTFV++KGD PL++S DL
Sbjct:  671 NANLVEGEGEVNEAGKRFLEVKQEWLSHAYGIIDDESEFTFKGYHGTYAVEVCTPAGIVLKTFVVEKGDTPLIISIDL 748          
BLAST of GR400128 vs. TAIR peptide
Match: AT4G08160.1 (| Symbols: | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein | chr4:5159211-5162694 REVERSE LENGTH=752)

HSP 1 Score: 103.99 bits (258), Expect = 2.501e-23
Identity = 43/78 (55.13%), Postives = 64/78 (82.05%), Query Frame = -3
Query:  151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384
            NA+LV  EG++NEAGKRFL +KQEWL H++G ++++ ++ FRG++GTY V++ TP+  + KTFV++KGD PLV+S DL
Sbjct:  672 NANLVEGEGEVNEAGKRFLEVKQEWLSHAYGIINDESEFTFRGYHGTYAVEICTPAGIVLKTFVVEKGDTPLVISIDL 749          
BLAST of GR400128 vs. TAIR peptide
Match: AT1G58370.1 (| Symbols: RXF12, ATXYN1 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein | chr1:21684751-21688209 FORWARD LENGTH=917)

HSP 1 Score: 100.138 bits (248), Expect = 3.612e-22
Identity = 45/79 (56.96%), Postives = 62/79 (78.48%), Query Frame = -3
Query:  151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVV-TPSKKIFKTFVLDKGDFPLVVSFDL 384
            N+HLVNAEGD+NEAGKRFLA+K++WL H++GH+D+ G + FRG+ G Y V+V+ T S K+ KTF +DK D   V++ DL
Sbjct:  836 NSHLVNAEGDVNEAGKRFLAVKKDWLSHANGHIDQNGAFPFRGYSGNYAVEVITTSSSKVLKTFGVDKEDSSQVITVDL 914          
BLAST of GR400128 vs. TAIR peptide
Match: AT1G10050.1 (| Symbols: | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein | chr1:3279270-3283444 FORWARD LENGTH=1063)

HSP 1 Score: 88.1965 bits (217), Expect = 1.420e-18
Identity = 39/78 (50.00%), Postives = 56/78 (71.79%), Query Frame = -3
Query:  151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384
            ++HLVNA+G++NEAGKRFL +K+EWL    G +++ G   FRG++G+Y V+VVT   K    FV+DKG+ P+ V  DL
Sbjct:  986 HSHLVNADGEVNEAGKRFLEIKREWLSFVDGEIEDGGGLEFRGYHGSYTVEVVTSESKYVTNFVVDKGNSPVDVIIDL 1063          
The following BLAST results are available for this feature:
BLAST of GR400128 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q3Y6U9_TOBAC2.147e-2771.79Putative xylanase Xyn2 OS=Nicotiana tabacum PE=2 S... [more]
Q3Y6V0_TOBAC8.160e-2771.79Putative xylanase Xyn1 OS=Nicotiana tabacum PE=2 S... [more]
Q5BMA5_9ROSI2.374e-2670.51Putative endo-1,4-beta-xylanase OS=Populus tremula... [more]
B9GNK0_POPTR2.374e-2671.79Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9R6T3_RICCO4.050e-2669.23Putative uncharacterized protein OS=Ricinus commun... [more]
Q27U87_EUCGG7.638e-2566.67Endo-1,4-beta-xylanase (Fragment) OS=Eucalyptus gl... [more]
B9R6T1_RICCO1.440e-2363.64Hydrolase, hydrolyzing O-glycosyl compounds, putat... [more]
C5WPQ6_SORBI7.904e-2261.33Putative uncharacterized protein Sb01g012210 OS=So... [more]
Q27U86_EUCGG1.032e-2160.26Endo-1,4-beta-xylanase (Fragment) OS=Eucalyptus gl... [more]
D7M8B1_ARALY3.004e-2155.13Glycosyl hydrolase family 10 protein OS=Arabidopsi... [more]
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BLAST of GR400128 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT4G08160.12.501e-2355.13| Symbols: | glycosyl hydrolase family 10 protein... [more]
AT1G58370.13.612e-2256.96| Symbols: RXF12, ATXYN1 | glycosyl hydrolase fami... [more]
AT1G10050.11.420e-1850.00| Symbols: | glycosyl hydrolase family 10 protein... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR400128 ID=GR400128; Name=GR400128; organism=Cicer arietinum; type=EST; length=389bp
CAACAACAAGTGTAACAATTTTATTTATTTGCCAAAGTGGCAAAACCCAA
TAAAGACAACATTACAATTTACAACACCATTGTGTTTCATCAAACTCAAT
GATAAAAGTGGACACACATTAATTCTTTCATGACAATATGCTTTTACTTA
TAAATCAAAGGACACCACCAATGGAAAATCACCTTTGTCAAGCACAAATG
TCTTAAAAATTTTCTTTGATGGGGTCACAACATCAACATTATATGTTCCA
TAAAACCCTCTAAAATTATATTGACCTTGCTCATCAACATGACCATGACT
GTGAAATAGCCACTCTTGTTTCAAAGCTAGAAACCTTTTCCCAGCTTCAT
TAATATCACCTTCAGCATTCACCAAATGTGCATTCCCGC
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