GR400128
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR400128 vs. TrEMBL
Match: Q3Y6U9_TOBAC (Putative xylanase Xyn2 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.147e-27 Identity = 56/78 (71.79%), Postives = 68/78 (87.18%), Query Frame = -3 Query: 151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384 NAHLVNAEGD+NEAGKR+L+LK EWL HSHGH+DEQGQ++F GF+G+Y V+V+T SKKI K FV+DKGD LV+S DL Sbjct: 841 NAHLVNAEGDLNEAGKRYLSLKHEWLSHSHGHIDEQGQFSFSGFHGSYEVEVITVSKKITKKFVVDKGDGALVISIDL 918
BLAST of GR400128 vs. TrEMBL
Match: Q3Y6V0_TOBAC (Putative xylanase Xyn1 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 8.160e-27 Identity = 56/78 (71.79%), Postives = 67/78 (85.90%), Query Frame = -3 Query: 151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384 NAHLVNAEGDINEAGKR+LALK EWL HSHGH+DEQGQ++F GF+G+Y V+V+T SKKI K FV+DK D L++S DL Sbjct: 841 NAHLVNAEGDINEAGKRYLALKHEWLSHSHGHIDEQGQFSFSGFHGSYEVEVITVSKKITKKFVVDKDDGALLISIDL 918
BLAST of GR400128 vs. TrEMBL
Match: Q5BMA5_9ROSI (Putative endo-1,4-beta-xylanase OS=Populus tremula x Populus tremuloides PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.374e-26 Identity = 55/78 (70.51%), Postives = 68/78 (87.18%), Query Frame = -3 Query: 151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384 NAH VNAEG++NEAGKR+LALK+EWL +HGH+DEQGQ+ FRGF+GTY +++ T SKK+ KTFV+DKGD PLVVS DL Sbjct: 838 NAHPVNAEGELNEAGKRYLALKKEWLSRAHGHIDEQGQFAFRGFHGTYVLEIETVSKKMVKTFVVDKGDSPLVVSIDL 915
BLAST of GR400128 vs. TrEMBL
Match: B9GNK0_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_411700 PE=4 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.374e-26 Identity = 56/78 (71.79%), Postives = 68/78 (87.18%), Query Frame = -3 Query: 151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384 NAHLVNAEG++NEAGKR+LALK+EWL +HG +DEQGQ+ FRGF+GTY +++ T SKKI KTFV+DKGD PLVVS DL Sbjct: 972 NAHLVNAEGELNEAGKRYLALKKEWLSRTHGCIDEQGQFAFRGFHGTYVLEIETVSKKIMKTFVVDKGDSPLVVSIDL 1049
BLAST of GR400128 vs. TrEMBL
Match: B9R6T3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1585080 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.050e-26 Identity = 54/78 (69.23%), Postives = 67/78 (85.90%), Query Frame = -3 Query: 151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384 NAHLVNAEG++NEAGKR+LALK EWL +HGH++EQG++ FRGF GTY +++ T SKKI KTFV+DKGD P+VVS DL Sbjct: 173 NAHLVNAEGELNEAGKRYLALKDEWLTRAHGHIEEQGEFTFRGFQGTYKLEINTISKKITKTFVVDKGDSPVVVSIDL 250
BLAST of GR400128 vs. TrEMBL
Match: Q27U87_EUCGG (Endo-1,4-beta-xylanase (Fragment) OS=Eucalyptus globulus subsp. globulus PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 7.638e-25 Identity = 52/78 (66.67%), Postives = 66/78 (84.62%), Query Frame = -3 Query: 151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384 NAHLVNAEGD+NEAGKR+LAL++EW H+HGHV+EQG+Y FRGF+GTY+V +VT SK+ K+ V+DKG+ PLVV L Sbjct: 232 NAHLVNAEGDVNEAGKRYLALRKEWSSHAHGHVNEQGEYTFRGFHGTYDVLIVTSSKRTTKSIVVDKGESPLVVPISL 309
BLAST of GR400128 vs. TrEMBL
Match: B9R6T1_RICCO (Hydrolase, hydrolyzing O-glycosyl compounds, putative OS=Ricinus communis GN=RCOM_1585060 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.440e-23 Identity = 49/77 (63.64%), Postives = 66/77 (85.71%), Query Frame = -3 Query: 151 AHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 381 AHLVNA+G IN AGKRFLAL++EWL H++GH++EQG++ FRGF GTYN+++ + SKK+ KT V+D+G+ PLVVS DL Sbjct: 751 AHLVNADGKINVAGKRFLALRKEWLSHANGHINEQGEFRFRGFRGTYNIEINSSSKKVNKTIVVDQGELPLVVSIDL 827
BLAST of GR400128 vs. TrEMBL
Match: C5WPQ6_SORBI (Putative uncharacterized protein Sb01g012210 OS=Sorghum bicolor GN=Sb01g012210 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.904e-22 Identity = 46/75 (61.33%), Postives = 60/75 (80.00%), Query Frame = -3 Query: 160 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVS 384 +AHLV+AEG +NEAG+R L LK+EWL HSHGH DE G+Y FRG +G Y+VDV TP+ K+ +TF +DK D PLV++ Sbjct: 671 DAHLVDAEGQVNEAGRRLLQLKREWLTHSHGHADENGEYKFRGHHGEYHVDVTTPTGKVSQTFTVDKDDAPLVLN 745
BLAST of GR400128 vs. TrEMBL
Match: Q27U86_EUCGG (Endo-1,4-beta-xylanase (Fragment) OS=Eucalyptus globulus subsp. globulus GN=Xyn2 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.032e-21 Identity = 47/78 (60.26%), Postives = 63/78 (80.77%), Query Frame = -3 Query: 151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384 NAHLVNAEG +NEAGKR L LK+EWL +HG V+E+ ++ FRGF+GTY+V+++TP +K+ KT V+DKG P+ VS DL Sbjct: 21 NAHLVNAEGGVNEAGKRLLGLKREWLSRAHGLVEEECEFRFRGFHGTYDVEIITPCEKVCKTIVVDKGYGPMEVSIDL 98
BLAST of GR400128 vs. TrEMBL
Match: D7M8B1_ARALY (Glycosyl hydrolase family 10 protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_489729 PE=4 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.004e-21 Identity = 43/78 (55.13%), Postives = 64/78 (82.05%), Query Frame = -3 Query: 151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384 NA+LV EG++NEAGKRFL +KQEWL H++G +D++ ++ F+G++GTY V+V TP+ + KTFV++KGD PL++S DL Sbjct: 671 NANLVEGEGEVNEAGKRFLEVKQEWLSHAYGIIDDESEFTFKGYHGTYAVEVCTPAGIVLKTFVVEKGDTPLIISIDL 748
BLAST of GR400128 vs. TAIR peptide
Match: AT4G08160.1 (| Symbols: | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein | chr4:5159211-5162694 REVERSE LENGTH=752) HSP 1 Score: 103.99 bits (258), Expect = 2.501e-23 Identity = 43/78 (55.13%), Postives = 64/78 (82.05%), Query Frame = -3 Query: 151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384 NA+LV EG++NEAGKRFL +KQEWL H++G ++++ ++ FRG++GTY V++ TP+ + KTFV++KGD PLV+S DL Sbjct: 672 NANLVEGEGEVNEAGKRFLEVKQEWLSHAYGIINDESEFTFRGYHGTYAVEICTPAGIVLKTFVVEKGDTPLVISIDL 749
BLAST of GR400128 vs. TAIR peptide
Match: AT1G58370.1 (| Symbols: RXF12, ATXYN1 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein | chr1:21684751-21688209 FORWARD LENGTH=917) HSP 1 Score: 100.138 bits (248), Expect = 3.612e-22 Identity = 45/79 (56.96%), Postives = 62/79 (78.48%), Query Frame = -3 Query: 151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVV-TPSKKIFKTFVLDKGDFPLVVSFDL 384 N+HLVNAEGD+NEAGKRFLA+K++WL H++GH+D+ G + FRG+ G Y V+V+ T S K+ KTF +DK D V++ DL Sbjct: 836 NSHLVNAEGDVNEAGKRFLAVKKDWLSHANGHIDQNGAFPFRGYSGNYAVEVITTSSSKVLKTFGVDKEDSSQVITVDL 914
BLAST of GR400128 vs. TAIR peptide
Match: AT1G10050.1 (| Symbols: | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein | chr1:3279270-3283444 FORWARD LENGTH=1063) HSP 1 Score: 88.1965 bits (217), Expect = 1.420e-18 Identity = 39/78 (50.00%), Postives = 56/78 (71.79%), Query Frame = -3 Query: 151 NAHLVNAEGDINEAGKRFLALKQEWLFHSHGHVDEQGQYNFRGFYGTYNVDVVTPSKKIFKTFVLDKGDFPLVVSFDL 384 ++HLVNA+G++NEAGKRFL +K+EWL G +++ G FRG++G+Y V+VVT K FV+DKG+ P+ V DL Sbjct: 986 HSHLVNADGEVNEAGKRFLEIKREWLSFVDGEIEDGGGLEFRGYHGSYTVEVVTSESKYVTNFVVDKGNSPVDVIIDL 1063 The following BLAST results are available for this feature:
BLAST of GR400128 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR400128 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR400128 ID=GR400128; Name=GR400128; organism=Cicer arietinum; type=EST; length=389bpback to top |