HO065042

EST Overview
NameHO065042
Unique NameHO065042
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length269
Libraries
Library NameType
LIBEST_026412 Chickpea drought stressed cDNA SSH library AS1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
[Close]
BLAST of HO065042 vs. TrEMBL
Match: B2G3R5_WHEAT (Putative puroindoline b protein OS=Triticum aestivum subsp. macha GN=pinb PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.765e-8
Identity = 34/73 (46.58%), Postives = 34/73 (46.58%), Query Frame = 2 
Query:   26 SXSXGXXGXRXXAXXGPXPPIGXRIXXXXPXFXXXXXGKXXAFPXLXXXQXXPLSPAGXXXKRPXPXXLPNXC 244
            S S G  G R  A  GP  PI  RI    P F     GK  A P L   Q  PLSPAG   KRP P  LPN C
Sbjct:  154 SNSRGRHGGREHATSGPIRPIVSRITIHWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSC 226
The following BLAST results are available for this feature:
BLAST of HO065042 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
B2G3R5_WHEAT3.765e-846.58Putative puroindoline b protein OS=Triticum aestiv... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 11..25
score: NAcoord: 30..36
score: NAcoord: 57..76
score: NAcoord: 82..88
score
NoneNo IPR availableSEGsegsegcoord: 5..30
score: NAcoord: 31..37
score: NAcoord: 44..54
score: NAcoord: 64..81
score
NoneNo IPR availableSEGsegsegcoord: 1..26
score: NAcoord: 45..57
score: NAcoord: 59..68
score: NAcoord: 73..78
score
NoneNo IPR availableSEGsegsegcoord: 7..19
score: NAcoord: 29..41
score
NoneNo IPR availableSEGsegsegcoord: 14..33
score: NAcoord: 54..60
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO065042 ID=HO065042; Name=HO065042; organism=Cicer arietinum; type=EST; length=269bp
NGTCCCNCGGCCNCGNCCCCCCTAATCNANTTCCCNCGGCCNCCNNGGCG
NCCGGGANCNNGCGNCGNCGGGCCCANTTCCCCCTATAGGGNGNCGNATT
NCANTTCNCNGGCCGNCGTTTTNCANCGNCGNGNCNGGGAAANCCCNGGC
GTTCCCCANCTTAANCNCCTNGCAGCNCNNCCCCCTTTCCCCNGCNGGNG
NAANANCNAAAAGGCCCNCCCCGNTCNCCCTTCCCAACANTTGCCCNCCC
NGAANGGCNAANGGNCCCC
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