HO063792

EST Overview
NameHO063792
Unique NameHO063792
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length403
Libraries
Library NameType
LIBEST_026410 Chickpea drought stressed cDNA SSH library AR1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO063792 vs. TrEMBL
Match: Q2HSF7_MEDTR (Cyclin-like F-box; F-box protein interaction domain; Galactose oxidase, central OS=Medicago truncatula GN=MtrDRAFT_AC151523g37v2 PE=4 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 2.405e-18
Identity = 53/135 (39.26%), Postives = 76/135 (56.30%), Query Frame = 2
Query:    8 FMSIFRNNLISYDHSYCDDTSLLL-QLTNRDLCXXXXXXXXXXXXXVIVDLPDPFKDEHPSIRVLDSGSITGILCLYT---GDLRYALWNPATEEFKIIPQLPREFDSPYITEEVIPLGFGFDQVRNDFKLITNV 400
            F+S+ RNN +  +H Y +DTSLLL Q+   D                 +D P+PF++  P+  +  S SI GILCL      + R  LWNP T+EFK+IP  P EF  P++  +++  GFG+D V ND+K+I  V
Sbjct:   54 FISLLRNNFLFNNHDYYEDTSLLLHQIVTDDEFVLYSLSGERFEIGTKIDWPNPFEENKPNFDISGSCSINGILCLINYSEPNTRAVLWNPTTQEFKVIPTSPFEF-VPHMDVDILRHGFGYDCVTNDYKIIRQV 187          
BLAST of HO063792 vs. TrEMBL
Match: A2Q231_MEDTR (Cyclin-like F-box; F-box protein interaction domain; Four-helical cytokine OS=Medicago truncatula GN=MtrDRAFT_AC149207g6v2 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.130e-14
Identity = 51/142 (35.92%), Postives = 74/142 (52.11%), Query Frame = 2
Query:    5 HFMSIFRNNLISYDHSYCDDTSLLLQLT---------NRDLCXXXXXXXXXXXXXVIVDLPDPFKDEHPSIRVLDSGSITGILCLYT-GDLRYALWNPATEEFKIIPQLPREFDSPYITEEVIPLGFGFDQVRNDFKLITNV 400
            HFM+I+RNN IS +H   DDTS +L+ T         +                 V +D   PF+     I ++ S  I GILC+    + ++A WNP+T+E KIIP  P E  + Y     + LGFG+D VR+D+K+I +V
Sbjct:   44 HFMNIYRNNFISKNHPDYDDTSYILRHTVIVPVVDGDDEFHSSLYFLTGERLENKVKLDCSLPFQYLGQDIVIVSSRGINGILCVSDRNETKFAFWNPSTKELKIIPPSPIEAATTYRNCYPLILGFGYDHVRDDYKVIRHV 185          
BLAST of HO063792 vs. TrEMBL
Match: Q2HSG7_MEDTR (Cyclin-like F-box; F-box protein interaction domain OS=Medicago truncatula GN=MtrDRAFT_AC151523g30v2 PE=4 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.042e-13
Identity = 49/139 (35.25%), Postives = 73/139 (52.52%), Query Frame = 2
Query:    5 HFMSIFRNNLISYDHSYCDDTSLL----LQLTNRDLCXXXXXXXXXXXXXVIVDLPDPFKDEHPSIRVLDSGSITGILCLYT---GDLRYALWNPATEEFKIIPQLPREFDSPYITEEVIPLGFGFDQVRNDFKLITNV 400
            +FMS+FR NL+  +HSY  DTSLL    + + +                   +D P+ F++  P   V+ SGSI GILCL +    + R   WNP T+EFKI+P   RE    ++  E+   GFG+  + +++KLI  V
Sbjct:   53 YFMSMFRKNLLCKNHSYYKDTSLLQLETVTIDSELKFVLYSLSGERYQNKTKLDWPNLFEEADPEFDVVGSGSINGILCLVSKSQPNNRVVFWNPTTDEFKIVPISLRE-SVRHVDVEITRHGFGYVSIADEYKLIRQV 190          
BLAST of HO063792 vs. TrEMBL
Match: A2Q609_MEDTR (Cyclin-like F-box; F-box protein interaction domain OS=Medicago truncatula GN=MtrDRAFT_AC172742g29v1 PE=4 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.042e-13
Identity = 49/139 (35.25%), Postives = 73/139 (52.52%), Query Frame = 2
Query:    5 HFMSIFRNNLISYDHSYCDDTSLL----LQLTNRDLCXXXXXXXXXXXXXVIVDLPDPFKDEHPSIRVLDSGSITGILCLYT---GDLRYALWNPATEEFKIIPQLPREFDSPYITEEVIPLGFGFDQVRNDFKLITNV 400
            +FMS+FR NL+  +HSY  DTSLL    + + +                   +D P+ F++  P   V+ SGSI GILCL +    + R   WNP T+EFKI+P   RE    ++  E+   GFG+  + +++KLI  V
Sbjct:   53 YFMSMFRKNLLCKNHSYYKDTSLLQLETVTIDSELKFVLYSLSGERYQNKTKLDWPNLFEEADPEFDVVGSGSINGILCLVSKSQPNNRVVFWNPTTDEFKIVPISLRE-SVRHVDVEITRHGFGYVSIADEYKLIRQV 190          
BLAST of HO063792 vs. TrEMBL
Match: Q2HSE7_MEDTR (F-box protein interaction domain OS=Medicago truncatula GN=MtrDRAFT_AC151523g35v2 PE=4 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 9.786e-12
Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 2
Query:  149 VDLPDPFKDEHPSIRVLDSGSITGILCLYT---GDLRYALWNPATEEFKIIPQLPREFDSPYITEEVIPLGFGFDQVRNDFKLITNV 400
            +D P+PF++  P   +  SGSI GILCL      +    LWNP T+EFK+IP    EF  P++  +++  GFG+D V ND+K+I  V
Sbjct:   19 LDCPNPFQEMEPKFVISGSGSINGILCLINYSQSNTIVVLWNPTTQEFKVIPTSSFEF-VPHMDVDILRHGFGYDCVTNDYKIIRQV 104          
BLAST of HO063792 vs. TrEMBL
Match: A2Q228_MEDTR (Cyclin-like F-box; F-box protein interaction domain OS=Medicago truncatula GN=MtrDRAFT_AC149207g4v2 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.323e-8
Identity = 50/147 (34.01%), Postives = 69/147 (46.94%), Query Frame = 2
Query:    5 HFMSIFRNNLISYDHSYCDDTSLLLQLTN------RDLCXXXXXXXXXXXXX------VIVDLPDPFKDEHPSIRVLDSGSITGILCLYT---GDLRYALWNPATEEFKIIPQLPREFDSPYITEEVIPLGFGFDQVRNDFKLITNV 400
            +FM I+RN +I  +HS   D SL+L+ T       R +                    V ++L  PF+     I +L S SI G LCL      + +  LWNP T+EF +IP  P E   PY   E    GFG+D V +D+K+I  V
Sbjct:   51 YFMKIYRNRIIQGNHSDHADASLILRHTIVLDNVVRPVVEPLFQSTLYFISGEKFENRVKLNLSLPFQVLGQDIYILGSISINGFLCLSNLLDDERKAVLWNPTTKEFIVIPSSPVE-SLPYRKFEAFIHGFGYDHVMDDYKVIRYV 196          
The following BLAST results are available for this feature:
BLAST of HO063792 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 6
Match NameE-valueIdentityDescription
Q2HSF7_MEDTR2.405e-1839.26Cyclin-like F-box; F-box protein interaction domai... [more]
A2Q231_MEDTR6.130e-1435.92Cyclin-like F-box; F-box protein interaction domai... [more]
Q2HSG7_MEDTR3.042e-1335.25Cyclin-like F-box; F-box protein interaction domai... [more]
A2Q609_MEDTR3.042e-1335.25Cyclin-like F-box; F-box protein interaction domai... [more]
Q2HSE7_MEDTR9.786e-1242.53F-box protein interaction domain OS=Medicago trunc... [more]
A2Q228_MEDTR1.323e-834.01Cyclin-like F-box; F-box protein interaction domai... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 35..47
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO063792 ID=HO063792; Name=HO063792; organism=Cicer arietinum; type=EST; length=403bp
CCATCATTTCATGAGCATCTTTCGCAACAATTTAATCTCTTATGATCATT
CGTACTGCGATGATACGTCTCTTCTCCTACAGCTTACTAATAGAGATTTG
TGTTCATTTTCTGGAGATAATTTTGGAGATAATTTTGACGATGTAATCGT
AGATCTTCCAGATCCGTTTAAAGATGAGCACCCTTCTATTAGGGTTTTGG
ATTCTGGTAGCATTACCGGAATTCTTTGTCTCTACACTGGTGATCTAAGA
TATGCATTATGGAATCCAGCAACAGAGGAATTCAAGATCATCCCTCAACT
CCCTCGTGAGTTTGATTCACCTTATATTACAGAAGAGGTTATTCCACTTG
GATTTGGTTTTGACCAAGTTAGAAATGATTTTAAGTTGATTACGAATGTA
CCT
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