HO063792
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO063792 vs. TrEMBL
Match: Q2HSF7_MEDTR (Cyclin-like F-box; F-box protein interaction domain; Galactose oxidase, central OS=Medicago truncatula GN=MtrDRAFT_AC151523g37v2 PE=4 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 2.405e-18 Identity = 53/135 (39.26%), Postives = 76/135 (56.30%), Query Frame = 2 Query: 8 FMSIFRNNLISYDHSYCDDTSLLL-QLTNRDLCXXXXXXXXXXXXXVIVDLPDPFKDEHPSIRVLDSGSITGILCLYT---GDLRYALWNPATEEFKIIPQLPREFDSPYITEEVIPLGFGFDQVRNDFKLITNV 400 F+S+ RNN + +H Y +DTSLLL Q+ D +D P+PF++ P+ + S SI GILCL + R LWNP T+EFK+IP P EF P++ +++ GFG+D V ND+K+I V Sbjct: 54 FISLLRNNFLFNNHDYYEDTSLLLHQIVTDDEFVLYSLSGERFEIGTKIDWPNPFEENKPNFDISGSCSINGILCLINYSEPNTRAVLWNPTTQEFKVIPTSPFEF-VPHMDVDILRHGFGYDCVTNDYKIIRQV 187
BLAST of HO063792 vs. TrEMBL
Match: A2Q231_MEDTR (Cyclin-like F-box; F-box protein interaction domain; Four-helical cytokine OS=Medicago truncatula GN=MtrDRAFT_AC149207g6v2 PE=4 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.130e-14 Identity = 51/142 (35.92%), Postives = 74/142 (52.11%), Query Frame = 2 Query: 5 HFMSIFRNNLISYDHSYCDDTSLLLQLT---------NRDLCXXXXXXXXXXXXXVIVDLPDPFKDEHPSIRVLDSGSITGILCLYT-GDLRYALWNPATEEFKIIPQLPREFDSPYITEEVIPLGFGFDQVRNDFKLITNV 400 HFM+I+RNN IS +H DDTS +L+ T + V +D PF+ I ++ S I GILC+ + ++A WNP+T+E KIIP P E + Y + LGFG+D VR+D+K+I +V Sbjct: 44 HFMNIYRNNFISKNHPDYDDTSYILRHTVIVPVVDGDDEFHSSLYFLTGERLENKVKLDCSLPFQYLGQDIVIVSSRGINGILCVSDRNETKFAFWNPSTKELKIIPPSPIEAATTYRNCYPLILGFGYDHVRDDYKVIRHV 185
BLAST of HO063792 vs. TrEMBL
Match: Q2HSG7_MEDTR (Cyclin-like F-box; F-box protein interaction domain OS=Medicago truncatula GN=MtrDRAFT_AC151523g30v2 PE=4 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.042e-13 Identity = 49/139 (35.25%), Postives = 73/139 (52.52%), Query Frame = 2 Query: 5 HFMSIFRNNLISYDHSYCDDTSLL----LQLTNRDLCXXXXXXXXXXXXXVIVDLPDPFKDEHPSIRVLDSGSITGILCLYT---GDLRYALWNPATEEFKIIPQLPREFDSPYITEEVIPLGFGFDQVRNDFKLITNV 400 +FMS+FR NL+ +HSY DTSLL + + + +D P+ F++ P V+ SGSI GILCL + + R WNP T+EFKI+P RE ++ E+ GFG+ + +++KLI V Sbjct: 53 YFMSMFRKNLLCKNHSYYKDTSLLQLETVTIDSELKFVLYSLSGERYQNKTKLDWPNLFEEADPEFDVVGSGSINGILCLVSKSQPNNRVVFWNPTTDEFKIVPISLRE-SVRHVDVEITRHGFGYVSIADEYKLIRQV 190
BLAST of HO063792 vs. TrEMBL
Match: A2Q609_MEDTR (Cyclin-like F-box; F-box protein interaction domain OS=Medicago truncatula GN=MtrDRAFT_AC172742g29v1 PE=4 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.042e-13 Identity = 49/139 (35.25%), Postives = 73/139 (52.52%), Query Frame = 2 Query: 5 HFMSIFRNNLISYDHSYCDDTSLL----LQLTNRDLCXXXXXXXXXXXXXVIVDLPDPFKDEHPSIRVLDSGSITGILCLYT---GDLRYALWNPATEEFKIIPQLPREFDSPYITEEVIPLGFGFDQVRNDFKLITNV 400 +FMS+FR NL+ +HSY DTSLL + + + +D P+ F++ P V+ SGSI GILCL + + R WNP T+EFKI+P RE ++ E+ GFG+ + +++KLI V Sbjct: 53 YFMSMFRKNLLCKNHSYYKDTSLLQLETVTIDSELKFVLYSLSGERYQNKTKLDWPNLFEEADPEFDVVGSGSINGILCLVSKSQPNNRVVFWNPTTDEFKIVPISLRE-SVRHVDVEITRHGFGYVSIADEYKLIRQV 190
BLAST of HO063792 vs. TrEMBL
Match: Q2HSE7_MEDTR (F-box protein interaction domain OS=Medicago truncatula GN=MtrDRAFT_AC151523g35v2 PE=4 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 9.786e-12 Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 2 Query: 149 VDLPDPFKDEHPSIRVLDSGSITGILCLYT---GDLRYALWNPATEEFKIIPQLPREFDSPYITEEVIPLGFGFDQVRNDFKLITNV 400 +D P+PF++ P + SGSI GILCL + LWNP T+EFK+IP EF P++ +++ GFG+D V ND+K+I V Sbjct: 19 LDCPNPFQEMEPKFVISGSGSINGILCLINYSQSNTIVVLWNPTTQEFKVIPTSSFEF-VPHMDVDILRHGFGYDCVTNDYKIIRQV 104
BLAST of HO063792 vs. TrEMBL
Match: A2Q228_MEDTR (Cyclin-like F-box; F-box protein interaction domain OS=Medicago truncatula GN=MtrDRAFT_AC149207g4v2 PE=4 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.323e-8 Identity = 50/147 (34.01%), Postives = 69/147 (46.94%), Query Frame = 2 Query: 5 HFMSIFRNNLISYDHSYCDDTSLLLQLTN------RDLCXXXXXXXXXXXXX------VIVDLPDPFKDEHPSIRVLDSGSITGILCLYT---GDLRYALWNPATEEFKIIPQLPREFDSPYITEEVIPLGFGFDQVRNDFKLITNV 400 +FM I+RN +I +HS D SL+L+ T R + V ++L PF+ I +L S SI G LCL + + LWNP T+EF +IP P E PY E GFG+D V +D+K+I V Sbjct: 51 YFMKIYRNRIIQGNHSDHADASLILRHTIVLDNVVRPVVEPLFQSTLYFISGEKFENRVKLNLSLPFQVLGQDIYILGSISINGFLCLSNLLDDERKAVLWNPTTKEFIVIPSSPVE-SLPYRKFEAFIHGFGYDHVMDDYKVIRYV 196 The following BLAST results are available for this feature:
BLAST of HO063792 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 6
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO063792 ID=HO063792; Name=HO063792; organism=Cicer arietinum; type=EST; length=403bpback to top |