HO067017
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO067017 vs. SwissProt
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.669e-42 Identity = 68/102 (66.67%), Postives = 77/102 (75.49%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQ 363 P IGVC GIFR P +D + +VD FPG SI FFGAL A YDD RKW+S VGV+TIG KLVNSKEGPPTFEQP MT+ KLL+YGNMLV+EQENV+ Sbjct: 307 PTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVK 408 HSP 2 Score: 50.447 bits (119), Expect = 2.669e-42 Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF 445 RVQLAD Y+SEAALGDANQDAI RGTF Sbjct: 409 RVQLADKYMSEAALGDANQDAIKRGTF 435
BLAST of HO067017 vs. SwissProt
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.306e-41 Identity = 71/111 (63.96%), Postives = 81/111 (72.97%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P IGVC GIFR +D + +VDTFPG SI FFGAL A YDD RKWI+GVGV++IG KLVNSKEGPPTFEQP MT+ KLLEYGNMLVQEQENV+ + + L Sbjct: 307 PTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYL 417 HSP 2 Score: 45.8246 bits (107), Expect = 1.306e-41 Identity = 22/27 (81.48%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF 445 RVQLAD YLSEAALGDAN DA+ GTF Sbjct: 409 RVQLADKYLSEAALGDANSDAMNTGTF 435
BLAST of HO067017 vs. SwissProt
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 9.000e-40 Identity = 67/102 (65.69%), Postives = 74/102 (72.55%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQ 363 P IGVC GIFR DD + +VDTFPG SI FFGAL A Y D RKW+S VGV+TIG KLVNSKEGPP+FEQP MT+ KLL YG MLVQEQENV+ Sbjct: 307 PTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVK 408 HSP 2 Score: 48.521 bits (114), Expect = 9.000e-40 Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF 445 RVQLAD Y+SEAALGDAN DAI RGTF Sbjct: 409 RVQLADKYMSEAALGDANNDAIKRGTF 435
BLAST of HO067017 vs. SwissProt
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 2.595e-39 Identity = 68/111 (61.26%), Postives = 79/111 (71.17%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P +GVC GIFR P +D +VDTFPG SI FFGAL A YDD RKWISGVGV+ G KLVNSKEGPPTF+QP M++ KLL+YGNMLVQEQENV+ + + L Sbjct: 309 PTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYL 419 HSP 2 Score: 43.1282 bits (100), Expect = 2.595e-39 Identity = 20/27 (74.07%), Postives = 24/27 (88.89%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF 445 RVQLAD YL+EAALG+AN+DAI G+F Sbjct: 411 RVQLADKYLNEAALGNANEDAIKSGSF 437
BLAST of HO067017 vs. SwissProt
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 3.652e-38 Identity = 62/111 (55.86%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P IGVC GIF+ P + + +VD FPG SI FFGAL A Y D RKW++ VGV+ +G KLVNSK+GPP FEQP MT+ KL+EYGNMLVQEQENV+ + Q + Sbjct: 305 PTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYM 415 HSP 2 Score: 46.9802 bits (110), Expect = 3.652e-38 Identity = 22/27 (81.48%), Postives = 24/27 (88.89%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF 445 RVQLAD Y+S AALGDAN+DAI RGTF Sbjct: 407 RVQLADQYMSSAALGDANKDAIDRGTF 433
BLAST of HO067017 vs. SwissProt
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 8.081e-38 Identity = 67/111 (60.36%), Postives = 77/111 (69.37%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P IGVC GIFR P D + +VD PG SI FFGAL A YDD RKWISGVGV+++G KLVNSKEGPPTF+QP MT+ KLL Y +MLVQEQENV+ + Q L Sbjct: 311 PTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYL 421 HSP 2 Score: 43.1282 bits (100), Expect = 8.081e-38 Identity = 20/27 (74.07%), Postives = 24/27 (88.89%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF 445 RVQLAD YL+EAALG+AN+DAI G+F Sbjct: 413 RVQLADQYLNEAALGNANEDAIKSGSF 439
BLAST of HO067017 vs. SwissProt
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 8.733e-37 Identity = 63/111 (56.76%), Postives = 77/111 (69.37%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P IGVC GIFR P + + +VDTFPG SI FFGAL A YDD RKW+ +GVE I +LVNS+EGPPTF+QP MT+ KL+EYG+MLVQEQENV+ + + L Sbjct: 294 PTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYL 404 HSP 2 Score: 41.5874 bits (96), Expect = 8.733e-37 Identity = 20/27 (74.07%), Postives = 21/27 (77.78%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF 445 RVQLAD YLSEAALG AN DA+ G F Sbjct: 396 RVQLADKYLSEAALGQANDDAMKTGAF 422
BLAST of HO067017 vs. SwissProt
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 4.265e-36 Identity = 64/111 (57.66%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P IGVC GIFR + + +VDTFPG SI FFGAL A YDD R+W+S GVE I KLVNSKEGPPTFEQP +T+ KLLEYG+MLV EQENV+ + + L Sbjct: 303 PTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYL 413 HSP 2 Score: 42.3578 bits (98), Expect = 4.265e-36 Identity = 19/27 (70.37%), Postives = 24/27 (88.89%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF 445 RVQLAD YL+EAALG+AN+DA+ G+F Sbjct: 405 RVQLADKYLNEAALGEANEDAMKTGSF 431
BLAST of HO067017 vs. SwissProt
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.230e-36 Identity = 61/102 (59.80%), Postives = 72/102 (70.59%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQ 363 P IGVC GIF+ + + IVDTFPG SI FFGAL A YDD RKW+ G+E IG +LVNS++GP TFEQP MTV KLLEYG+MLVQEQ+NV+ Sbjct: 297 PTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVK 398 HSP 2 Score: 44.2838 bits (103), Expect = 7.230e-36 Identity = 20/27 (74.07%), Postives = 24/27 (88.89%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF 445 RVQLAD Y+S+AALGDANQDA+ G+F Sbjct: 399 RVQLADTYMSQAALGDANQDAMKTGSF 425
BLAST of HO067017 vs. SwissProt
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.144e-33 Identity = 70/112 (62.50%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXLE 393 P IGVC GIFR P + I IVDTFPG SI FFGAL A YDD RKW+SG G+E IG KL+NS +GPPTFEQP MTV KLLEYGNMLVQEQENV+ + L+ Sbjct: 311 PTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLK 422
BLAST of HO067017 vs. TrEMBL
Match: A8QIH7_MORAL (Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase activase (Fragment) OS=Morus alba var. multicaulis PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.166e-43 Identity = 76/111 (68.47%), Postives = 82/111 (73.87%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P IGVC GIFR P +D + IVDTFPG SI FFGAL A YDD RKWISGVGVETIG KLVNSKEGPPTF+QP MTV KLLEYGNMLVQEQENV+ + + L Sbjct: 81 PTREDRIGVCTGIFRSDHVPEEDIVKIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVETIGKKLVNSKEGPPTFDQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYL 191 HSP 2 Score: 47.7506 bits (112), Expect = 4.166e-43 Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF 445 RVQLAD YLSEAALGDANQD+I GTF Sbjct: 183 RVQLADKYLSEAALGDANQDSIKSGTF 209
BLAST of HO067017 vs. TrEMBL
Match: D7SKB2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024910001 PE=4 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.473e-42 Identity = 74/111 (66.67%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P IGVC GIFR P DD + IVDTFPG SI FFGAL A YDD RKWISGVGV+ IG KLVNSKEGPPTFEQP MT+ KLLEYGNMLV EQENV+ + + L Sbjct: 307 PNREDRIGVCKGIFRSDNVPDDDIVKIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDFIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVMEQENVKRVQLADKYL 417 HSP 2 Score: 47.3654 bits (111), Expect = 4.473e-42 Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF 445 RVQLAD YLSEAALGDAN D+I RGTF Sbjct: 409 RVQLADKYLSEAALGDANVDSIERGTF 435
BLAST of HO067017 vs. TrEMBL
Match: A5C3D4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039112 PE=4 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.473e-42 Identity = 74/111 (66.67%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P IGVC GIFR P DD + IVDTFPG SI FFGAL A YDD RKWISGVGV+ IG KLVNSKEGPPTFEQP MT+ KLLEYGNMLV EQENV+ + + L Sbjct: 307 PNREDRIGVCKGIFRSDNVPDDDIVKIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDFIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVMEQENVKRVQLADKYL 417 HSP 2 Score: 47.3654 bits (111), Expect = 4.473e-42 Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF 445 RVQLAD YLSEAALGDAN D+I RGTF Sbjct: 409 RVQLADKYLSEAALGDANVDSIERGTF 435
BLAST of HO067017 vs. TrEMBL
Match: D4N5G2_SOYBN (Rubisco activase OS=Glycine max GN=RCA14 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 5.828e-42 Identity = 71/111 (63.96%), Postives = 81/111 (72.97%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P +GVC GIFR P D+ + +VDTFPG SI FFGAL A YDD RKWISGVGV+ IG KLVNSKEGPPTF+QP MT+ KLLEYGNMLVQEQENV+ + + L Sbjct: 311 PTRDDRVGVCKGIFRTDNVPEDEIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDLIGKKLVNSKEGPPTFDQPKMTLSKLLEYGNMLVQEQENVKRVQLADKYL 421 HSP 2 Score: 50.0618 bits (118), Expect = 5.828e-42 Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF 445 RVQLAD YL+EAALGDANQDAI RGTF Sbjct: 413 RVQLADKYLNEAALGDANQDAIKRGTF 439
BLAST of HO067017 vs. TrEMBL
Match: A9PGU7_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 9.896e-42 Identity = 70/111 (63.06%), Postives = 82/111 (73.87%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P IGVC GIF+ P +D + +VDTFPG SI FFGAL A YDD RKW+SGVGV++IG KLVNS+EGPPTFEQP MT+ KLLEYGNMLVQEQENV+ + + L Sbjct: 309 PTRDDRIGVCIGIFKSDKIPKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWVSGVGVDSIGKKLVNSREGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYL 419 HSP 2 Score: 48.9062 bits (115), Expect = 9.896e-42 Identity = 29/57 (50.88%), Postives = 34/57 (59.65%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF*XCTLLRXD*FNCLXQLXVXMAXGCNILNA 535 RVQLAD YLSEA+LG+ANQD+I RGTF Q+ V +A GC NA Sbjct: 411 RVQLADKYLSEASLGEANQDSIDRGTFYG---------QAAQQVKVPVAEGCTDPNA 458
BLAST of HO067017 vs. TrEMBL
Match: B9HT80_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_227384 PE=4 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 9.910e-42 Identity = 70/111 (63.06%), Postives = 82/111 (73.87%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P IGVC GIF+ P +D + +VDTFPG SI FFGAL A YDD RKW+SGVGV++IG KLVNS+EGPPTFEQP MT+ KLLEYGNMLVQEQENV+ + + L Sbjct: 259 PTRDDRIGVCIGIFKSDKIPKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWVSGVGVDSIGKKLVNSREGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYL 369 HSP 2 Score: 48.9062 bits (115), Expect = 9.910e-42 Identity = 29/57 (50.88%), Postives = 34/57 (59.65%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF*XCTLLRXD*FNCLXQLXVXMAXGCNILNA 535 RVQLAD YLSEA+LG+ANQD+I RGTF Q+ V +A GC NA Sbjct: 361 RVQLADKYLSEASLGEANQDSIDRGTFYG---------QAAQQVKVPVAEGCTDPNA 408
BLAST of HO067017 vs. TrEMBL
Match: Q19RP2_9MAGN (Ribulose-1,5-bisphosphate carboxylase/oxygenase activase (Fragment) OS=Pachysandra terminalis PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.201e-41 Identity = 72/111 (64.86%), Postives = 81/111 (72.97%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P IGVC GIF+ P +D + IVDTFPG SI FFGAL A YDD RKWISGVGV+ +G KLVNS+EGPPTFEQP MTV KLLEYGNMLVQEQENV+ + + L Sbjct: 147 PTRDDRIGVCTGIFKADNVPPEDVVKIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDKVGKKLVNSREGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYL 257 HSP 2 Score: 47.3654 bits (111), Expect = 2.201e-41 Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF 445 RVQLAD YLSEAALGDAN+DAI GTF Sbjct: 249 RVQLADKYLSEAALGDANKDAINSGTF 275
BLAST of HO067017 vs. TrEMBL
Match: A9PJ06_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.396e-40 Identity = 69/111 (62.16%), Postives = 81/111 (72.97%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P IGVC GIF+ +D + +VDTFPG SI FFGAL A YDD RKWISGVGV++IG KLVNS++GPPTFEQP MT+ KLLEYGNMLVQEQENV+ + + L Sbjct: 309 PTRDDRIGVCIGIFKSDKIAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDSIGKKLVNSRDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYL 419 HSP 2 Score: 48.9062 bits (115), Expect = 1.396e-40 Identity = 29/57 (50.88%), Postives = 34/57 (59.65%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF*XCTLLRXD*FNCLXQLXVXMAXGCNILNA 535 RVQLAD YLSEA+LG+ANQD+I RGTF Q+ V +A GC NA Sbjct: 411 RVQLADKYLSEASLGEANQDSIDRGTFYG---------QAAQQVKVPVAEGCTDPNA 458
BLAST of HO067017 vs. TrEMBL
Match: D4N5G3_SOYBN (Rubisco activase OS=Glycine max GN=RCA11 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 2.373e-40 Identity = 72/111 (64.86%), Postives = 79/111 (71.17%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P IGVC GIFR P D + IVDTFPG SI FFGAL A YDD RKWISGVGV+ IG KLVNSK+GPPTFEQP MT+ KLL YGNMLVQEQENV+ + + L Sbjct: 312 PTRDDRIGVCTGIFRTDSIPEQDVVKIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDGIGKKLVNSKDGPPTFEQPKMTLEKLLTYGNMLVQEQENVKRVQLADKYL 422 HSP 2 Score: 46.9802 bits (110), Expect = 2.373e-40 Identity = 22/27 (81.48%), Postives = 25/27 (92.59%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF 445 RVQLAD YL+EAALG+AN+DAI RGTF Sbjct: 414 RVQLADKYLNEAALGNANEDAINRGTF 440
BLAST of HO067017 vs. TrEMBL
Match: C6T859_SOYBN (Beta-form rubisco activase OS=Glycine max GN=RCAbeta PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 3.091e-40 Identity = 70/111 (63.06%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P IGVC GIFR P D + +VDTFPG SI FFGAL A YDD RKWISGVGV+++G KLVNSK+GPPTFEQP MT+ KLL YGNMLVQEQENV+ + + L Sbjct: 312 PTREDRIGVCTGIFRTDGIPEQDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKDGPPTFEQPKMTLEKLLLYGNMLVQEQENVKRVQLADKYL 422 HSP 2 Score: 46.9802 bits (110), Expect = 3.091e-40 Identity = 22/27 (81.48%), Postives = 25/27 (92.59%), Query Frame = 2 Query: 365 RVQLADXYLSEAALGDANQDAIXRGTF 445 RVQLAD YL+EAALG+AN+DAI RGTF Sbjct: 414 RVQLADKYLNEAALGNANEDAIQRGTF 440
BLAST of HO067017 vs. TAIR peptide
Match: AT2G39730.3 (| Symbols: RCA | rubisco activase | chr2:16571174-16573345 REVERSE LENGTH=441) HSP 1 Score: 126.331 bits (316), Expect = 1.120e-29 Identity = 62/111 (55.86%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P IGVC GIFR +D + +VD FPG SI FFGAL A YDD RK++ +GVE IG +LVNS+EGPP FEQP MT KL+EYGNMLV EQENV+ + L Sbjct: 307 PTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYL 417
BLAST of HO067017 vs. TAIR peptide
Match: AT2G39730.2 (| Symbols: RCA | rubisco activase | chr2:16571046-16573345 REVERSE LENGTH=446) HSP 1 Score: 126.331 bits (316), Expect = 1.120e-29 Identity = 62/111 (55.86%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P IGVC GIFR +D + +VD FPG SI FFGAL A YDD RK++ +GVE IG +LVNS+EGPP FEQP MT KL+EYGNMLV EQENV+ + L Sbjct: 307 PTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYL 417
BLAST of HO067017 vs. TAIR peptide
Match: AT2G39730.1 (| Symbols: RCA | rubisco activase | chr2:16570951-16573345 REVERSE LENGTH=474) HSP 1 Score: 126.331 bits (316), Expect = 1.120e-29 Identity = 62/111 (55.86%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 58 PQEMTXIGVCXGIFRXYXXPXDDXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGVGVETIGXKLVNSKEGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXL 390 P IGVC GIFR +D + +VD FPG SI FFGAL A YDD RK++ +GVE IG +LVNS+EGPP FEQP MT KL+EYGNMLV EQENV+ + L Sbjct: 307 PTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYL 417
BLAST of HO067017 vs. TAIR peptide
Match: AT1G73110.1 (| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:27494344-27496844 REVERSE LENGTH=432) HSP 1 Score: 61.2326 bits (147), Expect = 4.424e-10 Identity = 33/93 (35.48%), Postives = 51/93 (54.84%), Query Frame = 1 Query: 124 DXIXIVDTFPGXSIXFFGALXAXXYDDXXRKWISGV-GVETIGXKLVNSK--EGPPTFEQPXMTVXKLLEYGNMLVQEQENVQXSSIGRQXLE 393 D I IVD FP ++ F+GAL + YD KW+ G+ET+G L+ K + P F P TV LLE G L+ EQ+ + + + ++ ++ Sbjct: 336 DVISIVDKFPNQALDFYGALRSRTYDRSILKWVDEAGGMETLGKVLLRRKKTQEVPQFTAPEQTVEALLESGYSLINEQKLIMETKLSKEYMK 428 The following BLAST results are available for this feature:
BLAST of HO067017 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 10
BLAST of HO067017 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of HO067017 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO067017 ID=HO067017; Name=HO067017; organism=Cicer arietinum; type=EST; length=576bpback to top |