HO067896

EST Overview


Name	HO067896
Unique Name	HO067896
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	382

Libraries


Library Name	Type
LIBEST_026415 Chickpea drought stressed cDNA SSH library BULK2	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO067896 vs. SwissProt
Match: IF4G1_ARATH (Eukaryotic translation initiation factor 4G OS=Arabidopsis thaliana GN=EIF4G PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.121e-23
Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 3

Query:    6 EFLGRIFAEIITESLVSLNEIGKLIHDGGEEPGSLLEVGLAADILGSTLEVIQHEKGDSVLSEIRASSNLRLESFRPPNSITSKKLEKF 272
            EFLGRIF + +TE +V+L EIG+LI +GGEEPGSL+E GL  D+LGS LE+I+ E G+  L EIR SS LR+E+F+P     SK LEKF
Sbjct: 1636 EFLGRIFGKSVTEKVVTLTEIGRLIQEGGEEPGSLIEFGLGGDVLGSVLEMIKTEAGEETLVEIRRSSGLRIENFKPHAPNRSKILEKF 1724

[Close]

BLAST of HO067896 vs. TrEMBL
Match: B9GP87_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_644265 PE=4 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.406e-26
Identity = 58/91 (63.74%), Postives = 76/91 (83.52%), Query Frame = 3

Query:    3 PEFLGRIFAEIITESLVSLNEIGKLIHDGGEEPGSLLEVGLAADILGSTLEVIQHEKGDSVLSEIRASSNLRLESFRPPNSITSKKLEKFI 275
            PEFLGRI   ++ E++V L+EIG L+H+GGEEPGSLL++GLA D+LGS LE+I+ EKG++VL+EIR +SNLRLE FRPP+   S+ LEKFI
Sbjct:   62 PEFLGRIIGRVVVENVVPLSEIGPLLHEGGEEPGSLLKLGLAGDVLGSILEMIKVEKGEAVLNEIRGASNLRLEDFRPPDPNRSRILEKFI 152

[Close]

BLAST of HO067896 vs. TrEMBL
Match: B9MV40_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_677642 PE=4 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.925e-25
Identity = 56/91 (61.54%), Postives = 71/91 (78.02%), Query Frame = 3

Query:    3 PEFLGRIFAEIITESLVSLNEIGKLIHDGGEEPGSLLEVGLAADILGSTLEVIQHEKGDSVLSEIRASSNLRLESFRPPNSITSKKLEKFI 275
            PEFLGRI   ++ E++V L EIG+L+H+GGEEPGSLL+ GLA D+LGS LE+I+ E G  VL+EIR +SNLR E FRPP+   S+ LEKFI
Sbjct: 1076 PEFLGRILGRVVVENVVPLKEIGRLLHEGGEEPGSLLKFGLAGDVLGSVLEMIKAENGQGVLNEIRNASNLRFEDFRPPHPNRSRILEKFI 1166

[Close]

BLAST of HO067896 vs. TrEMBL
Match: A9PHK2_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.925e-25
Identity = 56/91 (61.54%), Postives = 71/91 (78.02%), Query Frame = 3

Query:    3 PEFLGRIFAEIITESLVSLNEIGKLIHDGGEEPGSLLEVGLAADILGSTLEVIQHEKGDSVLSEIRASSNLRLESFRPPNSITSKKLEKFI 275
            PEFLGRI   ++ E++V L EIG+L+H+GGEEPGSLL+ GLA D+LGS LE+I+ E G  VL+EIR +SNLR E FRPP+   S+ LEKFI
Sbjct:  580 PEFLGRILGRVVVENVVPLKEIGRLLHEGGEEPGSLLKFGLAGDVLGSVLEMIKAENGQGVLNEIRNASNLRFEDFRPPHPNRSRILEKFI 670

[Close]

BLAST of HO067896 vs. TrEMBL
Match: B9SKF9_RICCO (Eukaryotic translation initiation factor 4g, putative OS=Ricinus communis GN=RCOM_0658590 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.724e-24
Identity = 56/90 (62.22%), Postives = 73/90 (81.11%), Query Frame = 3

Query:    6 EFLGRIFAEIITESLVSLNEIGKLIHDGGEEPGSLLEVGLAADILGSTLEVIQHEKGDSVLSEIRASSNLRLESFRPPNSITSKKLEKFI 275
            EFLGR+ A+ + E+++ L EIG+L+H+GGEEPG LLE+GLA D+LGSTLE+I+ EKG+SVL+EI  SSNL LE FRPP    S+ LE+FI
Sbjct: 1664 EFLGRMLAKAVVENVIPLREIGQLLHEGGEEPGRLLEIGLAGDVLGSTLEMIRVEKGESVLNEICISSNLHLEDFRPPAPNRSRILERFI 1753

[Close]

BLAST of HO067896 vs. TrEMBL
Match: D7SM27_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018330001 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.252e-24
Identity = 57/91 (62.64%), Postives = 76/91 (83.52%), Query Frame = 3

Query:    6 EFLGRIFAEIITESLVSLNEIGKLIHDGGEEPGSLLEVGLAADILGSTLEVIQHEKGDSVLSEIRASSNLRLESFRPPN-SITSKKLEKFI 275
            EFLGRIFA +I E+++ L E+G++I +GGEEPG L E+GLAA++LGSTLE+I+ EKG++VL+EIR  SNLRL+ FRPP+ S  S KL+KFI
Sbjct:   96 EFLGRIFAMVIIENVIPLRELGQIILEGGEEPGRLREIGLAAEVLGSTLEIIKSEKGENVLNEIRKVSNLRLDDFRPPDPSYRSAKLDKFI 186

[Close]

BLAST of HO067896 vs. TrEMBL
Match: Q0WVG9_ARATH (Initiation factor eIF-4 gamma like OS=Arabidopsis thaliana GN=At3g60235 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.046e-21
Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 3

Query:    6 EFLGRIFAEIITESLVSLNEIGKLIHDGGEEPGSLLEVGLAADILGSTLEVIQHEKGDSVLSEIRASSNLRLESFRPPNSITSKKLEKF 272
            EFLGRIF + +TE +V+L EIG+LI +GGEEPGSL+E GL  D+LGS LE+I+ E G+  L EIR SS LR+E+F+P     SK LEKF
Sbjct: 1638 EFLGRIFGKSVTEKVVTLTEIGRLIQEGGEEPGSLIEFGLGGDVLGSVLEMIKTEAGEETLVEIRRSSGLRIENFKPHAPNRSKILEKF 1726

[Close]

BLAST of HO067896 vs. TrEMBL
Match: A8MR97_ARATH (Uncharacterized protein At3g60240.2 OS=Arabidopsis thaliana GN=At3g60240 PE=4 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.046e-21
Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 3

Query:    6 EFLGRIFAEIITESLVSLNEIGKLIHDGGEEPGSLLEVGLAADILGSTLEVIQHEKGDSVLSEIRASSNLRLESFRPPNSITSKKLEKF 272
            EFLGRIF + +TE +V+L EIG+LI +GGEEPGSL+E GL  D+LGS LE+I+ E G+  L EIR SS LR+E+F+P     SK LEKF
Sbjct: 1634 EFLGRIFGKSVTEKVVTLTEIGRLIQEGGEEPGSLIEFGLGGDVLGSVLEMIKTEAGEETLVEIRRSSGLRIENFKPHAPNRSKILEKF 1722

[Close]

BLAST of HO067896 vs. TrEMBL
Match: D7LRN0_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_907545 PE=4 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.854e-21
Identity = 52/89 (58.43%), Postives = 65/89 (73.03%), Query Frame = 3

Query:    6 EFLGRIFAEIITESLVSLNEIGKLIHDGGEEPGSLLEVGLAADILGSTLEVIQHEKGDSVLSEIRASSNLRLESFRPPNSITSKKLEKF 272
            EFLGRI  + +TE +V+L EIG+LI +GGEEPGSL+E GL  D+LGS LE+I+ E G+  L EIR SS LR+E F+P     SK LEKF
Sbjct: 1644 EFLGRIVGKSVTEKVVTLTEIGRLIREGGEEPGSLIEFGLGGDVLGSVLEMIKTEAGEEALVEIRRSSGLRIEDFKPHAPNRSKILEKF 1732

[Close]

BLAST of HO067896 vs. TrEMBL
Match: Q69S49_ORYSJ (Putative eukaryotic translation initiation factor 4G OS=Oryza sativa subsp. japonica GN=OSJNBa0058I18.6 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.720e-19
Identity = 48/90 (53.33%), Postives = 66/90 (73.33%), Query Frame = 3

Query:    6 EFLGRIFAEIITESLVSLNEIGKLIHDGGEEPGSLLEVGLAADILGSTLEVIQHEKGDSVLSEIRASSNLRLESFRPPNSITSKKLEKFI 275
            E+LGR+ A  + ES++SL E+G LI  GGEEPG L+  G+ AD+LG+ LE I+ EKGDS L+E +ASSNL+LE FRP + +   KL+ F+
Sbjct: 1411 EYLGRLLARFVVESILSLQEVGTLIEKGGEEPGELVHHGIGADVLGAVLESIKVEKGDSFLNEAKASSNLKLEDFRPQH-LKRSKLDAFM 1499

[Close]

BLAST of HO067896 vs. TrEMBL
Match: Q0D5K1_ORYSJ (Os07g0555200 protein OS=Oryza sativa subsp. japonica GN=Os07g0555200 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.720e-19
Identity = 48/90 (53.33%), Postives = 66/90 (73.33%), Query Frame = 3

Query:    6 EFLGRIFAEIITESLVSLNEIGKLIHDGGEEPGSLLEVGLAADILGSTLEVIQHEKGDSVLSEIRASSNLRLESFRPPNSITSKKLEKFI 275
            E+LGR+ A  + ES++SL E+G LI  GGEEPG L+  G+ AD+LG+ LE I+ EKGDS L+E +ASSNL+LE FRP + +   KL+ F+
Sbjct:  724 EYLGRLLARFVVESILSLQEVGTLIEKGGEEPGELVHHGIGADVLGAVLESIKVEKGDSFLNEAKASSNLKLEDFRPQH-LKRSKLDAFM 812

[Close]

BLAST of HO067896 vs. TAIR peptide
Match: AT3G60240.4 (| Symbols: EIF4G, CUM2 | eukaryotic translation initiation factor 4G | chr3:22261842-22268295 FORWARD LENGTH=1727)

HSP 1 Score: 106.301 bits (264), Expect = 4.803e-24
Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 3

Query:    6 EFLGRIFAEIITESLVSLNEIGKLIHDGGEEPGSLLEVGLAADILGSTLEVIQHEKGDSVLSEIRASSNLRLESFRPPNSITSKKLEKF 272
            EFLGRIF + +TE +V+L EIG+LI +GGEEPGSL+E GL  D+LGS LE+I+ E G+  L EIR SS LR+E+F+P     SK LEKF
Sbjct: 1638 EFLGRIFGKSVTEKVVTLTEIGRLIQEGGEEPGSLIEFGLGGDVLGSVLEMIKTEAGEETLVEIRRSSGLRIENFKPHAPNRSKILEKF 1726

[Close]

BLAST of HO067896 vs. TAIR peptide
Match: AT3G60240.3 (| Symbols: EIF4G, CUM2 | eukaryotic translation initiation factor 4G | chr3:22261842-22268295 FORWARD LENGTH=1725)

HSP 1 Score: 106.301 bits (264), Expect = 4.803e-24
Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 3

Query:    6 EFLGRIFAEIITESLVSLNEIGKLIHDGGEEPGSLLEVGLAADILGSTLEVIQHEKGDSVLSEIRASSNLRLESFRPPNSITSKKLEKF 272
            EFLGRIF + +TE +V+L EIG+LI +GGEEPGSL+E GL  D+LGS LE+I+ E G+  L EIR SS LR+E+F+P     SK LEKF
Sbjct: 1636 EFLGRIFGKSVTEKVVTLTEIGRLIQEGGEEPGSLIEFGLGGDVLGSVLEMIKTEAGEETLVEIRRSSGLRIENFKPHAPNRSKILEKF 1724

[Close]

BLAST of HO067896 vs. TAIR peptide
Match: AT3G60240.2 (| Symbols: EIF4G, CUM2 | eukaryotic translation initiation factor 4G | chr3:22261842-22268295 FORWARD LENGTH=1723)

HSP 1 Score: 106.301 bits (264), Expect = 4.803e-24
Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 3

Query:    6 EFLGRIFAEIITESLVSLNEIGKLIHDGGEEPGSLLEVGLAADILGSTLEVIQHEKGDSVLSEIRASSNLRLESFRPPNSITSKKLEKF 272
            EFLGRIF + +TE +V+L EIG+LI +GGEEPGSL+E GL  D+LGS LE+I+ E G+  L EIR SS LR+E+F+P     SK LEKF
Sbjct: 1634 EFLGRIFGKSVTEKVVTLTEIGRLIQEGGEEPGSLIEFGLGGDVLGSVLEMIKTEAGEETLVEIRRSSGLRIENFKPHAPNRSKILEKF 1722

The following BLAST results are available for this feature:

BLAST of HO067896 vs. SwissProt
BLAST of HO067896 vs. TrEMBL
BLAST of HO067896 vs. TAIR peptide

BLAST of HO067896 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1


Match Name	E-value	Identity	Description
IF4G1_ARATH	5.121e-23	59.55	Eukaryotic translation initiation factor 4G OS=Ara...	[more]

BLAST of HO067896 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9GP87_POPTR	2.406e-26	63.74	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9MV40_POPTR	5.925e-25	61.54	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PHK2_POPTR	5.925e-25	61.54	Putative uncharacterized protein OS=Populus tricho...	[more]
B9SKF9_RICCO	1.724e-24	62.22	Eukaryotic translation initiation factor 4g, putat...	[more]
D7SM27_VITVI	2.252e-24	62.64	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q0WVG9_ARATH	1.046e-21	59.55	Initiation factor eIF-4 gamma like OS=Arabidopsis ...	[more]
A8MR97_ARATH	1.046e-21	59.55	Uncharacterized protein At3g60240.2 OS=Arabidopsis...	[more]
D7LRN0_ARALY	8.854e-21	58.43	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q69S49_ORYSJ	3.720e-19	53.33	Putative eukaryotic translation initiation factor ...	[more]
Q0D5K1_ORYSJ	3.720e-19	53.33	Os07g0555200 protein OS=Oryza sativa subsp. japoni...	[more]

BLAST of HO067896 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT3G60240.4	4.803e-24	59.55	\| Symbols: EIF4G, CUM2 \| eukaryotic translation in...	[more]
AT3G60240.3	4.803e-24	59.55	\| Symbols: EIF4G, CUM2 \| eukaryotic translation in...	[more]
AT3G60240.2	4.803e-24	59.55	\| Symbols: EIF4G, CUM2 \| eukaryotic translation in...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23253	EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA	coord: 2..82 score: 4.9
None	No IPR available	PANTHER	PTHR23253:SF7	EUKARYOTIC TRANSLATION INITIATION FACTOR 4G	coord: 2..82 score: 4.9

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO067896 ID=HO067896; Name=HO067896; organism=Cicer arietinum; type=EST; length=382bp
CACCCGAGTTTCTTGGCCGTATTTTTGCAGAAATTATAACAGAGAGTTTA
GTCAGTTTGAATGAAATTGGGAAGTTAATACATGATGGTGGAGAGGAGCC
AGGTAGTCTCTTAGAAGTTGGACTTGCAGCTGATATTCTTGGAAGCACCC
TGGAAGTAATACAGCATGAGAAAGGGGACAGCGTTCTTAGCGAAATTCGC
GCGAGCTCTAACTTGCGGTTGGAGTCTTTCCGACCACCTAATTCTATTAC
ATCAAAGAAGTTGGAGAAATTTATTTAGATAATAGTGATGCTCAATGTAT
GCATGCTTTTTACATACATATACGGGGGTAAATTATTTTGTCTAGTGCTT
TGGGGATTACTCAGTGAGATGGGTGGGTAGAA

Search form