HO063079

EST Overview


Name	HO063079
Unique Name	HO063079
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	329

Libraries


Library Name	Type
LIBEST_026409 Chickpea drought stressed cDNA SSH library AB2	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO063079 vs. TrEMBL
Match: C6TNT6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.985e-12
Identity = 46/82 (56.10%), Postives = 56/82 (68.29%), Query Frame = -3

Query:   73 RGE-DTGVWEKLKERKETSEGIVVLRGKLFLEK*VVMEKRTK--KNRFQYDAHSYALNFNSGAQSEDEEYLPPSFSSRFFAP 309
            +GE ++ V EKL++ KE SE I   + K F+ K     K+ K  +NRFQYD HSYA NFNSGAQSEDE  +P SFSSRF AP
Sbjct:   54 KGEGESWVVEKLRKAKEVSEVIAGPKWKTFIRKISGYGKKVKQQRNRFQYDEHSYAFNFNSGAQSEDEG-MPHSFSSRFAAP 134

[Close]

BLAST of HO063079 vs. TrEMBL
Match: C6T1C1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.340e-11
Identity = 44/82 (53.66%), Postives = 54/82 (65.85%), Query Frame = -3

Query:   73 RGE-DTGVWEKLKERKETSEGIVVLRGKLFLEK*VVMEKRTK--KNRFQYDAHSYALNFNSGAQSEDEEYLPPSFSSRFFAP 309
            +GE ++ V  KL++ KE SE I   + K F+ K     K+ K  +NRFQYD HSYALNFNS AQ EDE  +P SFSSRF AP
Sbjct:   53 KGEGESWVVNKLRKAKEVSEVIAGPKWKTFIRKISGYGKKVKYQRNRFQYDEHSYALNFNSEAQREDEG-MPHSFSSRFAAP 133

The following BLAST results are available for this feature:

BLAST of HO063079 vs. TrEMBL

BLAST of HO063079 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2


Match Name	E-value	Identity	Description
C6TNT6_SOYBN	1.985e-12	56.10	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6T1C1_SOYBN	8.340e-11	53.66	Putative uncharacterized protein OS=Glycine max PE...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 1..12 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO063079 ID=HO063079; Name=HO063079; organism=Cicer arietinum; type=EST; length=329bp
AGAAATTTTAGCAATCAAATTAATATCTTTGGAAAATACAAAAACATGTT
ACCTATATGTCATGATTCATTTTGGAGCAAAAAATCTTGAGGAAAAACTT
GGAGGCAAATATTCTTCATCTTCACTTTGAGCCCCACTATTAAAATTGAG
AGCATAACTATGTGCATCATATTGAAACCTATTTTTTTTGGTTCTTTTTT
CCATAACAACTTATTTTTCTAAAAAAAGTTTTCCCCTTAGGACCACAATC
CCTTCTGAAGTTTCCTTCCTTTCCTTCAATTTTTCCCACACCCCTGTGTC
CTCTCCCCTATTCCCCCATCCTTTTCTTC

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