FE672888

EST Overview


Name	FE672888
Unique Name	FE672888
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	416

Libraries


Library Name	Type
LIBEST_022820 Drought-stressed chickpea leave library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of FE672888 vs. SwissProt
Match: TIAR_HUMAN (Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.745e-18
Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = 2

Query:  122 DSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKS--PYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYA-RGQREDTSGHFHIFVGDL 415
            D    R++YV ++   VTE L+ +LFS  G  + CK+I +  S  PY FV++++    A A+  +NGR I G  +KVNWA     Q++DTS HFH+FVGDL
Sbjct:    4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDL 104

[Close]

BLAST of FE672888 vs. SwissProt
Match: TIAR_MOUSE (Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.055e-16
Identity = 44/118 (37.29%), Postives = 63/118 (53.39%), Query Frame = 2

Query:  122 DSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQ-------------------KSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYA-RGQREDTSGHFHIFVGDL 415
            D    R++YV ++   VTE L+ +LFS  G  + CK+I +Q                     PY FV++++    A A+  +NGR I G  +KVNWA     Q++DTS HFH+FVGDL
Sbjct:    4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDL 121

[Close]

BLAST of FE672888 vs. SwissProt
Match: TIA1_MOUSE (Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.309e-14
Identity = 41/107 (38.32%), Postives = 59/107 (55.14%), Query Frame = 2

Query:  137 RSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQ--KSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYA-RGQREDTSG-----------HFHIFVGDL 415
            +++YV ++   VTE L+ +LFS  G  + CK+I       PY FV++ +    A A+  +NGR I G  +KVNWA     Q++DTS            HFH+FVGDL
Sbjct:    7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDL 113

[Close]

BLAST of FE672888 vs. SwissProt
Match: TIA1_HUMAN (Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 7.309e-14
Identity = 41/107 (38.32%), Postives = 59/107 (55.14%), Query Frame = 2

Query:  137 RSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQ--KSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYA-RGQREDTSG-----------HFHIFVGDL 415
            +++YV ++   VTE L+ +LFS  G  + CK+I       PY FV++ +    A A+  +NGR I G  +KVNWA     Q++DTS            HFH+FVGDL
Sbjct:    7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDL 113

[Close]

BLAST of FE672888 vs. SwissProt
Match: PUB1_YEAST (Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 OS=Saccharomyces cerevisiae GN=PUB1 PE=1 SV=3)

HSP 1 Score: 61.2326 bits (147), Expect = 1.863e-9
Identity = 33/111 (29.73%), Postives = 60/111 (54.05%), Query Frame = 2

Query:   92 ILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSP---YGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415
            ++  N   G   ++ R +YV ++   +TE +L++ F   G +   K++  + +    Y FV+Y       IA+ TLNG+ I    +K+NWA+ + Q+  +   F++FVGDL
Sbjct:   60 VVPANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAF-QSQQSSSDDTFNLFVGDL 169

[Close]

BLAST of FE672888 vs. TrEMBL
Match: C6TH42_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.581e-57
Identity = 109/138 (78.99%), Postives = 121/138 (87.68%), Query Frame = 2

Query:    2 MQPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415
            MQP +LRQ+ M+  S  HHPAL+TPP IE ILSGNLPPGFDSS+CRSVYV +IHPQVT+ LLQELFS+AGALEGCKLIRK+KS YGFVDYFDR++ A AIVTLNGRNIFG  IKVNWAYA  QREDTSGHF+IFVGDL
Sbjct:    1 MQPQRLRQHAMLQPSLYHHPALLTPPQIEPILSGNLPPGFDSSSCRSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKSSYGFVDYFDRSSAAFAIVTLNGRNIFGQPIKVNWAYASSQREDTSGHFNIFVGDL 138

[Close]

BLAST of FE672888 vs. TrEMBL
Match: D7TCB7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015040001 PE=4 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 3.265e-52
Identity = 99/137 (72.26%), Postives = 114/137 (83.21%), Query Frame = 2

Query:    5 QPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415
            Q   ++Q+ +   S  HHP L+ PP IE ILSGNLPPGFDSSTCRSVYV +IHPQVTEPLLQE+FSS G LEGCKLIRK+KS YGFVDYFDR + A++IVTLNGR++FG  IKVNWAYA  QREDTSGH++IFVGDL
Sbjct:   10 QQALIQQSLLQQQSLYHHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASSQREDTSGHYNIFVGDL 146

[Close]

BLAST of FE672888 vs. TrEMBL
Match: Q9M427_NICPL (Oligouridylate binding protein OS=Nicotiana plumbaginifolia GN=ubp1 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 8.043e-51
Identity = 98/137 (71.53%), Postives = 111/137 (81.02%), Query Frame = 2

Query:    5 QPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415
            Q LK +Q   +     +HP L+ PP IE ILSGNLPPGFDSSTCRSVYV +IHPQVTEPLLQE+F+S G LEGCKLIRK KS YGFVDYFDR + A+AIVTLNGR++FG  IKVNWAYA  QREDTS H++IFVGDL
Sbjct:    5 QRLKQQQQQALMQQSLYHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFASTGPLEGCKLIRKDKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAYASAQREDTSNHYNIFVGDL 141

[Close]

BLAST of FE672888 vs. TrEMBL
Match: B9RR73_RICCO (Nucleolysin tia-1, putative OS=Ricinus communis GN=RCOM_0710770 PE=4 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 8.043e-51
Identity = 99/138 (71.74%), Postives = 114/138 (82.61%), Query Frame = 2

Query:    2 MQPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415
            MQ  +L+Q  MM   H   PAL+  P IE ILSGNLPPGFDS+TCRSVYV +IHPQVTEPLLQE+FS+ G +EGCKLIRK+KS YGFVDYFDR + A++IVTLNGR++FG  IKVNWAYA  QREDTSGHF+IFVGDL
Sbjct:    2 MQHHRLKQQAMMPYPH---PALVAAPQIEPILSGNLPPGFDSTTCRSVYVGNIHPQVTEPLLQEVFSNTGLIEGCKLIRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDL 136

[Close]

BLAST of FE672888 vs. TrEMBL
Match: A5AXF7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027348 PE=4 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 3.736e-48
Identity = 91/137 (66.42%), Postives = 110/137 (80.29%), Query Frame = 2

Query:    5 QPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415
            Q   L Q  ++     +HP L+ PP IE I SGNLPPGFDSSTCRSVYV +IH QV+EPLLQE+F+S G +EGCKL+RK+KS YGF+ YFDR + A+AI++LNGR++FG  IKVNWAYA GQREDTSGHF+IFVGDL
Sbjct:    9 QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDL 145

[Close]

BLAST of FE672888 vs. TrEMBL
Match: B9GVQ6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_645804 PE=4 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.879e-48
Identity = 92/137 (67.15%), Postives = 108/137 (78.83%), Query Frame = 2

Query:    5 QPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415
            Q   L Q  ++     +HP L+ PP IE I SGNLPPGFD STCRSVYV +IH QVTEPLLQE+F+S G +EGCKLIRK+KS YGF+ YFDR   A+AI++LNGR++FG  IKVNWAYA GQREDTSGHF+IFVGDL
Sbjct:    9 QQQALMQQALLQQQSIYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKLIRKEKSSYGFIHYFDRRAAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDL 145

[Close]

BLAST of FE672888 vs. TrEMBL
Match: Q2XPV3_SOLTU (Oligouridylate binding protein-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 8.323e-48
Identity = 91/137 (66.42%), Postives = 109/137 (79.56%), Query Frame = 2

Query:    5 QPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415
            Q   L Q  ++     +HP L+ PP IE I SGNLPPGFD STCRSV+V +IHPQVTEPLLQE+FSS G +EGCKLIRK+KS YGF+ Y+DR + A+AIV+LNGR++FG  IKVNWA+A GQREDTS HF+IFVGDL
Sbjct:   10 QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVFVGNIHPQVTEPLLQEVFSSTGLVEGCKLIRKEKSSYGFIHYYDRRSAALAIVSLNGRHLFGQPIKVNWAFASGQREDTSSHFNIFVGDL 146

[Close]

BLAST of FE672888 vs. TrEMBL
Match: D7TZP5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016720001 PE=4 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.087e-47
Identity = 89/131 (67.94%), Postives = 108/131 (82.44%), Query Frame = 2

Query:   23 QNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415
            Q  ++     +HP L+ PP IE I SGNLPPGFDSSTCRSVYV +IH QV+EPLLQE+F+S G +EGCKL+RK+KS YGF+ YFDR + A+AI++LNGR++FG  IKVNWAYA GQREDTSGHF+IFVGDL
Sbjct:    2 QQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDL 132

[Close]

BLAST of FE672888 vs. TrEMBL
Match: B9ST80_RICCO (Nucleolysin tia-1, putative OS=Ricinus communis GN=RCOM_0684960 PE=4 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.131e-47
Identity = 90/137 (65.69%), Postives = 108/137 (78.83%), Query Frame = 2

Query:    5 QPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415
            Q   L Q  ++     +HP L+ PP IE I SGNLPPGFD STCRSVYV +IH QVTEPLLQE+F+S G +E CKLIRK+KS YGF+ YFDR + A+AI++LNGR++FG  IKVNWAYA GQREDTSGH++IFVGDL
Sbjct:    9 QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVESCKLIRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGDL 145

[Close]

BLAST of FE672888 vs. TrEMBL
Match: B9N7F5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_673211 PE=4 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.202e-46
Identity = 92/138 (66.67%), Postives = 109/138 (78.99%), Query Frame = 2

Query:    2 MQPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415
            MQ   L+Q  ++     +HP L+ P  IE I SGNLPPGFD STCRSVYV +IH QVTEPLLQE+F+S G +EGCKLIRK+KS YGF+ YFDR   A+AI++LNGR++FG  IKVNWAYA GQREDTSGHF+IFVGDL
Sbjct:   14 MQQALLQQQSLLQQQSLYHPGLLAPQ-IEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKLIRKEKSSYGFIHYFDRRAAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDL 150

[Close]

BLAST of FE672888 vs. TAIR peptide
Match: AT1G17370.2 (| Symbols: UBP1B | oligouridylate binding protein 1B | chr1:5951842-5954825 REVERSE LENGTH=416)

HSP 1 Score: 186.037 bits (471), Expect = 5.987e-48
Identity = 88/133 (66.17%), Postives = 104/133 (78.20%), Query Frame = 2

Query:   17 LRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415
            + Q  +M     +HP L+ PP IE I SGNLPPGFD STCRSVYV +IH QVTEPLLQE+F+  G +E CKLIRK+KS YGFV YFDR +  +AI++LNGR++FG  IKVNWAYA GQREDTS HF+IFVGDL
Sbjct:   14 MMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYASGQREDTSSHFNIFVGDL 146

[Close]

BLAST of FE672888 vs. TAIR peptide
Match: AT1G17370.1 (| Symbols: UBP1B | oligouridylate binding protein 1B | chr1:5951842-5954825 REVERSE LENGTH=419)

HSP 1 Score: 186.037 bits (471), Expect = 5.987e-48
Identity = 88/133 (66.17%), Postives = 104/133 (78.20%), Query Frame = 2

Query:   17 LRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415
            + Q  +M     +HP L+ PP IE I SGNLPPGFD STCRSVYV +IH QVTEPLLQE+F+  G +E CKLIRK+KS YGFV YFDR +  +AI++LNGR++FG  IKVNWAYA GQREDTS HF+IFVGDL
Sbjct:   14 MMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYASGQREDTSSHFNIFVGDL 146

[Close]

BLAST of FE672888 vs. TAIR peptide
Match: AT3G14100.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:4673027-4675950 FORWARD LENGTH=427)

HSP 1 Score: 184.496 bits (467), Expect = 1.742e-47
Identity = 87/137 (63.50%), Postives = 106/137 (77.37%), Query Frame = 2

Query:    5 QPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415
            Q   ++Q  +M     +HP ++ PP +E + SGNLPPGFD STCRSVYV +IH QVTEPLLQE+F+S G +E  KLIRK KS YGFV YFDR + A+AI++LNGR++FG  IKVNWAYA GQREDTS HF+IFVGDL
Sbjct:   15 QQAMMQQQALMQQHSLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDL 151

[Close]

BLAST of FE672888 vs. TAIR peptide
Match: AT1G54080.1 (| Symbols: UBP1A | oligouridylate-binding protein 1A | chr1:20183923-20186824 REVERSE LENGTH=426)

HSP 1 Score: 178.333 bits (451), Expect = 1.248e-45
Identity = 85/138 (61.59%), Postives = 106/138 (76.81%), Query Frame = 2

Query:    2 MQPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415
            +Q   ++Q+P ++     HP ++ PP +E + SGNLPPGFD +TCRSVY  +IH QVTE LLQE+F+S G +E CKLIRK KS YGFV YFDR   ++AI+TLNGR+IFG  +KVNWAYA GQREDTS HF+IFVGDL
Sbjct:   23 IQQAMMQQHPSLY-----HPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDL 155

[Close]

BLAST of FE672888 vs. TAIR peptide
Match: AT1G54080.2 (| Symbols: UBP1A | oligouridylate-binding protein 1A | chr1:20183923-20186824 REVERSE LENGTH=430)

HSP 1 Score: 178.333 bits (451), Expect = 1.248e-45
Identity = 85/138 (61.59%), Postives = 106/138 (76.81%), Query Frame = 2

Query:    2 MQPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415
            +Q   ++Q+P ++     HP ++ PP +E + SGNLPPGFD +TCRSVY  +IH QVTE LLQE+F+S G +E CKLIRK KS YGFV YFDR   ++AI+TLNGR+IFG  +KVNWAYA GQREDTS HF+IFVGDL
Sbjct:   23 IQQAMMQQHPSLY-----HPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDL 155

[Close]

BLAST of FE672888 vs. TAIR peptide
Match: AT5G19350.2 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:6518978-6521295 FORWARD LENGTH=421)

HSP 1 Score: 51.9878 bits (123), Expect = 1.349e-7
Identity = 32/100 (32.00%), Postives = 48/100 (48.00%), Query Frame = 2

Query:  137 RSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRK----QKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSI--KVNWA-YARGQREDTSGHFHIFVGDL 415
            R++++ D+   V E  L   FS  G L   K+IR     Q   YGF+++         + T NG  + G  +  ++NWA +  GQ+ D      IFVGDL
Sbjct:   24 RTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDL 123

[Close]

BLAST of FE672888 vs. TAIR peptide
Match: AT5G19350.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:6518978-6521295 FORWARD LENGTH=425)

HSP 1 Score: 51.9878 bits (123), Expect = 1.349e-7
Identity = 32/100 (32.00%), Postives = 48/100 (48.00%), Query Frame = 2

Query:  137 RSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRK----QKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSI--KVNWA-YARGQREDTSGHFHIFVGDL 415
            R++++ D+   V E  L   FS  G L   K+IR     Q   YGF+++         + T NG  + G  +  ++NWA +  GQ+ D      IFVGDL
Sbjct:   24 RTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDL 123

The following BLAST results are available for this feature:

BLAST of FE672888 vs. SwissProt
BLAST of FE672888 vs. TrEMBL
BLAST of FE672888 vs. TAIR peptide

BLAST of FE672888 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 5


Match Name	E-value	Identity	Description
TIAR_HUMAN	3.745e-18	43.56	Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=...	[more]
TIAR_MOUSE	2.055e-16	37.29	Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=...	[more]
TIA1_MOUSE	7.309e-14	38.32	Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=...	[more]
TIA1_HUMAN	7.309e-14	38.32	Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=T...	[more]
PUB1_YEAST	1.863e-9	29.73	Nuclear and cytoplasmic polyadenylated RNA-binding...	[more]

BLAST of FE672888 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TH42_SOYBN	2.581e-57	78.99	Putative uncharacterized protein (Fragment) OS=Gly...	[more]
D7TCB7_VITVI	3.265e-52	72.26	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q9M427_NICPL	8.043e-51	71.53	Oligouridylate binding protein OS=Nicotiana plumba...	[more]
B9RR73_RICCO	8.043e-51	71.74	Nucleolysin tia-1, putative OS=Ricinus communis GN...	[more]
A5AXF7_VITVI	3.736e-48	66.42	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9GVQ6_POPTR	4.879e-48	67.15	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q2XPV3_SOLTU	8.323e-48	66.42	Oligouridylate binding protein-like protein OS=Sol...	[more]
D7TZP5_VITVI	1.087e-47	67.94	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9ST80_RICCO	4.131e-47	65.69	Nucleolysin tia-1, putative OS=Ricinus communis GN...	[more]
B9N7F5_POPTR	1.202e-46	66.67	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of FE672888 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 7


Match Name	E-value	Identity	Description
AT1G17370.2	5.987e-48	66.17	\| Symbols: UBP1B \| oligouridylate binding protein ...	[more]
AT1G17370.1	5.987e-48	66.17	\| Symbols: UBP1B \| oligouridylate binding protein ...	[more]
AT3G14100.1	1.742e-47	63.50	\| Symbols: \| RNA-binding (RRM/RBD/RNP motifs) fam...	[more]
AT1G54080.1	1.248e-45	61.59	\| Symbols: UBP1A \| oligouridylate-binding protein ...	[more]
AT1G54080.2	1.248e-45	61.59	\| Symbols: UBP1A \| oligouridylate-binding protein ...	[more]
AT5G19350.2	1.349e-7	32.00	\| Symbols: \| RNA-binding (RRM/RBD/RNP motifs) fam...	[more]
AT5G19350.1	1.349e-7	32.00	\| Symbols: \| RNA-binding (RRM/RBD/RNP motifs) fam...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 48..111 score: 2.6
IPR000504	RNA recognition motif domain	SMART	SM00360	no description	coord: 47..116 score: 2.8
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 46..120 score: 13
IPR012677	Nucleotide-binding, alpha-beta plait	GENE3D	3.30.70.330	no description	coord: 46..129 score: 5.5
None	No IPR available	PANTHER	PTHR10432	RNA-BINDING PROTEIN	coord: 40..138 score: 1.5
None	No IPR available	PANTHER	PTHR10432:SF66	NUCLEOLYSIN TIA-1	coord: 40..138 score: 1.5
None	No IPR available	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 26..125 score: 2
None	No IPR available	SEG	seg	seg	coord: 59..68 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FE672888 ID=FE672888; Name=FE672888; organism=Cicer arietinum; type=EST; length=416bp
CATGCAACCTCTTAAATTAAGGCAAAATCCCATGATGCATCTTTCACACG
GTCATCACCCAGCTCTTATTACTCCTCCGTACATAGAGCTTATCTTGAGT
GGAAATCTGCCTCCTGGCTTTGATTCGAGTACTTGCCGCAGTGTTTATGT
CCGCGACATTCATCCTCAGGTTACAGAACCCCTTCTTCAAGAGCTTTTTT
CAAGTGCTGGCGCCCTTGAAGGGTGCAAGCTTATTCGGAAACAGAAGTCG
CCATATGGCTTCGTGGACTACTTTGATCGCACTACAACTGCGATTGCTAT
TGTAACTCTCAATGGGAGGAATATTTTTGGACCGTCTATCAAAGTTAACT
GGGCTTATGCTCGCGGCCAGAGAGAAGACACATCAGGCCACTTTCATATT
TTTGTTGGCGACCTTA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf

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