FE672888
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FE672888 vs. SwissProt
Match: TIAR_HUMAN (Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.745e-18 Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 122 DSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKS--PYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYA-RGQREDTSGHFHIFVGDL 415 D R++YV ++ VTE L+ +LFS G + CK+I + S PY FV++++ A A+ +NGR I G +KVNWA Q++DTS HFH+FVGDL Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDL 104
BLAST of FE672888 vs. SwissProt
Match: TIAR_MOUSE (Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.055e-16 Identity = 44/118 (37.29%), Postives = 63/118 (53.39%), Query Frame = 2 Query: 122 DSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQ-------------------KSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYA-RGQREDTSGHFHIFVGDL 415 D R++YV ++ VTE L+ +LFS G + CK+I +Q PY FV++++ A A+ +NGR I G +KVNWA Q++DTS HFH+FVGDL Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDL 121
BLAST of FE672888 vs. SwissProt
Match: TIA1_MOUSE (Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.309e-14 Identity = 41/107 (38.32%), Postives = 59/107 (55.14%), Query Frame = 2 Query: 137 RSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQ--KSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYA-RGQREDTSG-----------HFHIFVGDL 415 +++YV ++ VTE L+ +LFS G + CK+I PY FV++ + A A+ +NGR I G +KVNWA Q++DTS HFH+FVGDL Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDL 113
BLAST of FE672888 vs. SwissProt
Match: TIA1_HUMAN (Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 7.309e-14 Identity = 41/107 (38.32%), Postives = 59/107 (55.14%), Query Frame = 2 Query: 137 RSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQ--KSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYA-RGQREDTSG-----------HFHIFVGDL 415 +++YV ++ VTE L+ +LFS G + CK+I PY FV++ + A A+ +NGR I G +KVNWA Q++DTS HFH+FVGDL Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDL 113
BLAST of FE672888 vs. SwissProt
Match: PUB1_YEAST (Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 OS=Saccharomyces cerevisiae GN=PUB1 PE=1 SV=3) HSP 1 Score: 61.2326 bits (147), Expect = 1.863e-9 Identity = 33/111 (29.73%), Postives = 60/111 (54.05%), Query Frame = 2 Query: 92 ILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSP---YGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415 ++ N G ++ R +YV ++ +TE +L++ F G + K++ + + Y FV+Y IA+ TLNG+ I +K+NWA+ + Q+ + F++FVGDL Sbjct: 60 VVPANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAF-QSQQSSSDDTFNLFVGDL 169
BLAST of FE672888 vs. TrEMBL
Match: C6TH42_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 2.581e-57 Identity = 109/138 (78.99%), Postives = 121/138 (87.68%), Query Frame = 2 Query: 2 MQPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415 MQP +LRQ+ M+ S HHPAL+TPP IE ILSGNLPPGFDSS+CRSVYV +IHPQVT+ LLQELFS+AGALEGCKLIRK+KS YGFVDYFDR++ A AIVTLNGRNIFG IKVNWAYA QREDTSGHF+IFVGDL Sbjct: 1 MQPQRLRQHAMLQPSLYHHPALLTPPQIEPILSGNLPPGFDSSSCRSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKSSYGFVDYFDRSSAAFAIVTLNGRNIFGQPIKVNWAYASSQREDTSGHFNIFVGDL 138
BLAST of FE672888 vs. TrEMBL
Match: D7TCB7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015040001 PE=4 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 3.265e-52 Identity = 99/137 (72.26%), Postives = 114/137 (83.21%), Query Frame = 2 Query: 5 QPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415 Q ++Q+ + S HHP L+ PP IE ILSGNLPPGFDSSTCRSVYV +IHPQVTEPLLQE+FSS G LEGCKLIRK+KS YGFVDYFDR + A++IVTLNGR++FG IKVNWAYA QREDTSGH++IFVGDL Sbjct: 10 QQALIQQSLLQQQSLYHHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASSQREDTSGHYNIFVGDL 146
BLAST of FE672888 vs. TrEMBL
Match: Q9M427_NICPL (Oligouridylate binding protein OS=Nicotiana plumbaginifolia GN=ubp1 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 8.043e-51 Identity = 98/137 (71.53%), Postives = 111/137 (81.02%), Query Frame = 2 Query: 5 QPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415 Q LK +Q + +HP L+ PP IE ILSGNLPPGFDSSTCRSVYV +IHPQVTEPLLQE+F+S G LEGCKLIRK KS YGFVDYFDR + A+AIVTLNGR++FG IKVNWAYA QREDTS H++IFVGDL Sbjct: 5 QRLKQQQQQALMQQSLYHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFASTGPLEGCKLIRKDKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAYASAQREDTSNHYNIFVGDL 141
BLAST of FE672888 vs. TrEMBL
Match: B9RR73_RICCO (Nucleolysin tia-1, putative OS=Ricinus communis GN=RCOM_0710770 PE=4 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 8.043e-51 Identity = 99/138 (71.74%), Postives = 114/138 (82.61%), Query Frame = 2 Query: 2 MQPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415 MQ +L+Q MM H PAL+ P IE ILSGNLPPGFDS+TCRSVYV +IHPQVTEPLLQE+FS+ G +EGCKLIRK+KS YGFVDYFDR + A++IVTLNGR++FG IKVNWAYA QREDTSGHF+IFVGDL Sbjct: 2 MQHHRLKQQAMMPYPH---PALVAAPQIEPILSGNLPPGFDSTTCRSVYVGNIHPQVTEPLLQEVFSNTGLIEGCKLIRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDL 136
BLAST of FE672888 vs. TrEMBL
Match: A5AXF7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027348 PE=4 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 3.736e-48 Identity = 91/137 (66.42%), Postives = 110/137 (80.29%), Query Frame = 2 Query: 5 QPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415 Q L Q ++ +HP L+ PP IE I SGNLPPGFDSSTCRSVYV +IH QV+EPLLQE+F+S G +EGCKL+RK+KS YGF+ YFDR + A+AI++LNGR++FG IKVNWAYA GQREDTSGHF+IFVGDL Sbjct: 9 QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDL 145
BLAST of FE672888 vs. TrEMBL
Match: B9GVQ6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_645804 PE=4 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 4.879e-48 Identity = 92/137 (67.15%), Postives = 108/137 (78.83%), Query Frame = 2 Query: 5 QPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415 Q L Q ++ +HP L+ PP IE I SGNLPPGFD STCRSVYV +IH QVTEPLLQE+F+S G +EGCKLIRK+KS YGF+ YFDR A+AI++LNGR++FG IKVNWAYA GQREDTSGHF+IFVGDL Sbjct: 9 QQQALMQQALLQQQSIYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKLIRKEKSSYGFIHYFDRRAAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDL 145
BLAST of FE672888 vs. TrEMBL
Match: Q2XPV3_SOLTU (Oligouridylate binding protein-like protein OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 8.323e-48 Identity = 91/137 (66.42%), Postives = 109/137 (79.56%), Query Frame = 2 Query: 5 QPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415 Q L Q ++ +HP L+ PP IE I SGNLPPGFD STCRSV+V +IHPQVTEPLLQE+FSS G +EGCKLIRK+KS YGF+ Y+DR + A+AIV+LNGR++FG IKVNWA+A GQREDTS HF+IFVGDL Sbjct: 10 QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVFVGNIHPQVTEPLLQEVFSSTGLVEGCKLIRKEKSSYGFIHYYDRRSAALAIVSLNGRHLFGQPIKVNWAFASGQREDTSSHFNIFVGDL 146
BLAST of FE672888 vs. TrEMBL
Match: D7TZP5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016720001 PE=4 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.087e-47 Identity = 89/131 (67.94%), Postives = 108/131 (82.44%), Query Frame = 2 Query: 23 QNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415 Q ++ +HP L+ PP IE I SGNLPPGFDSSTCRSVYV +IH QV+EPLLQE+F+S G +EGCKL+RK+KS YGF+ YFDR + A+AI++LNGR++FG IKVNWAYA GQREDTSGHF+IFVGDL Sbjct: 2 QQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDL 132
BLAST of FE672888 vs. TrEMBL
Match: B9ST80_RICCO (Nucleolysin tia-1, putative OS=Ricinus communis GN=RCOM_0684960 PE=4 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 4.131e-47 Identity = 90/137 (65.69%), Postives = 108/137 (78.83%), Query Frame = 2 Query: 5 QPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415 Q L Q ++ +HP L+ PP IE I SGNLPPGFD STCRSVYV +IH QVTEPLLQE+F+S G +E CKLIRK+KS YGF+ YFDR + A+AI++LNGR++FG IKVNWAYA GQREDTSGH++IFVGDL Sbjct: 9 QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVESCKLIRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGDL 145
BLAST of FE672888 vs. TrEMBL
Match: B9N7F5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_673211 PE=4 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.202e-46 Identity = 92/138 (66.67%), Postives = 109/138 (78.99%), Query Frame = 2 Query: 2 MQPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415 MQ L+Q ++ +HP L+ P IE I SGNLPPGFD STCRSVYV +IH QVTEPLLQE+F+S G +EGCKLIRK+KS YGF+ YFDR A+AI++LNGR++FG IKVNWAYA GQREDTSGHF+IFVGDL Sbjct: 14 MQQALLQQQSLLQQQSLYHPGLLAPQ-IEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKLIRKEKSSYGFIHYFDRRAAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDL 150
BLAST of FE672888 vs. TAIR peptide
Match: AT1G17370.2 (| Symbols: UBP1B | oligouridylate binding protein 1B | chr1:5951842-5954825 REVERSE LENGTH=416) HSP 1 Score: 186.037 bits (471), Expect = 5.987e-48 Identity = 88/133 (66.17%), Postives = 104/133 (78.20%), Query Frame = 2 Query: 17 LRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415 + Q +M +HP L+ PP IE I SGNLPPGFD STCRSVYV +IH QVTEPLLQE+F+ G +E CKLIRK+KS YGFV YFDR + +AI++LNGR++FG IKVNWAYA GQREDTS HF+IFVGDL Sbjct: 14 MMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYASGQREDTSSHFNIFVGDL 146
BLAST of FE672888 vs. TAIR peptide
Match: AT1G17370.1 (| Symbols: UBP1B | oligouridylate binding protein 1B | chr1:5951842-5954825 REVERSE LENGTH=419) HSP 1 Score: 186.037 bits (471), Expect = 5.987e-48 Identity = 88/133 (66.17%), Postives = 104/133 (78.20%), Query Frame = 2 Query: 17 LRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415 + Q +M +HP L+ PP IE I SGNLPPGFD STCRSVYV +IH QVTEPLLQE+F+ G +E CKLIRK+KS YGFV YFDR + +AI++LNGR++FG IKVNWAYA GQREDTS HF+IFVGDL Sbjct: 14 MMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYASGQREDTSSHFNIFVGDL 146
BLAST of FE672888 vs. TAIR peptide
Match: AT3G14100.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:4673027-4675950 FORWARD LENGTH=427) HSP 1 Score: 184.496 bits (467), Expect = 1.742e-47 Identity = 87/137 (63.50%), Postives = 106/137 (77.37%), Query Frame = 2 Query: 5 QPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415 Q ++Q +M +HP ++ PP +E + SGNLPPGFD STCRSVYV +IH QVTEPLLQE+F+S G +E KLIRK KS YGFV YFDR + A+AI++LNGR++FG IKVNWAYA GQREDTS HF+IFVGDL Sbjct: 15 QQAMMQQQALMQQHSLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDL 151
BLAST of FE672888 vs. TAIR peptide
Match: AT1G54080.1 (| Symbols: UBP1A | oligouridylate-binding protein 1A | chr1:20183923-20186824 REVERSE LENGTH=426) HSP 1 Score: 178.333 bits (451), Expect = 1.248e-45 Identity = 85/138 (61.59%), Postives = 106/138 (76.81%), Query Frame = 2 Query: 2 MQPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415 +Q ++Q+P ++ HP ++ PP +E + SGNLPPGFD +TCRSVY +IH QVTE LLQE+F+S G +E CKLIRK KS YGFV YFDR ++AI+TLNGR+IFG +KVNWAYA GQREDTS HF+IFVGDL Sbjct: 23 IQQAMMQQHPSLY-----HPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDL 155
BLAST of FE672888 vs. TAIR peptide
Match: AT1G54080.2 (| Symbols: UBP1A | oligouridylate-binding protein 1A | chr1:20183923-20186824 REVERSE LENGTH=430) HSP 1 Score: 178.333 bits (451), Expect = 1.248e-45 Identity = 85/138 (61.59%), Postives = 106/138 (76.81%), Query Frame = 2 Query: 2 MQPLKLRQNPMMHLSHGHHPALITPPYIELILSGNLPPGFDSSTCRSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRKQKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSIKVNWAYARGQREDTSGHFHIFVGDL 415 +Q ++Q+P ++ HP ++ PP +E + SGNLPPGFD +TCRSVY +IH QVTE LLQE+F+S G +E CKLIRK KS YGFV YFDR ++AI+TLNGR+IFG +KVNWAYA GQREDTS HF+IFVGDL Sbjct: 23 IQQAMMQQHPSLY-----HPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDL 155
BLAST of FE672888 vs. TAIR peptide
Match: AT5G19350.2 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:6518978-6521295 FORWARD LENGTH=421) HSP 1 Score: 51.9878 bits (123), Expect = 1.349e-7 Identity = 32/100 (32.00%), Postives = 48/100 (48.00%), Query Frame = 2 Query: 137 RSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRK----QKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSI--KVNWA-YARGQREDTSGHFHIFVGDL 415 R++++ D+ V E L FS G L K+IR Q YGF+++ + T NG + G + ++NWA + GQ+ D IFVGDL Sbjct: 24 RTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDL 123
BLAST of FE672888 vs. TAIR peptide
Match: AT5G19350.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:6518978-6521295 FORWARD LENGTH=425) HSP 1 Score: 51.9878 bits (123), Expect = 1.349e-7 Identity = 32/100 (32.00%), Postives = 48/100 (48.00%), Query Frame = 2 Query: 137 RSVYVRDIHPQVTEPLLQELFSSAGALEGCKLIRK----QKSPYGFVDYFDRTTTAIAIVTLNGRNIFGPSI--KVNWA-YARGQREDTSGHFHIFVGDL 415 R++++ D+ V E L FS G L K+IR Q YGF+++ + T NG + G + ++NWA + GQ+ D IFVGDL Sbjct: 24 RTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDL 123 The following BLAST results are available for this feature:
BLAST of FE672888 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 5
BLAST of FE672888 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of FE672888 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 7
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FE672888 ID=FE672888; Name=FE672888; organism=Cicer arietinum; type=EST; length=416bpback to top |