GR916648
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR916648 vs. SwissProt
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.149e-19 Identity = 45/52 (86.54%), Postives = 49/52 (94.23%), Query Frame = -2 Query: 244 TDSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 399 TDSK+INDRETGRSRGFGFVTF +SMRDAIEGMNGQ++DGRNITVNEAQS Sbjct: 33 TDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQS 84
BLAST of GR916648 vs. SwissProt
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.270e-18 Identity = 43/51 (84.31%), Postives = 48/51 (94.12%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSK+INDRETGRSRGFGFVTF +SM+DAIEGMNGQD+DGR+ITVNEAQS Sbjct: 36 DSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQS 86
BLAST of GR916648 vs. SwissProt
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.270e-18 Identity = 43/51 (84.31%), Postives = 48/51 (94.12%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSK+INDRETGRSRGFGFVTF +SM+DAIEGMNGQD+DGR+ITVNEAQS Sbjct: 36 DSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQS 86
BLAST of GR916648 vs. SwissProt
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.830e-18 Identity = 42/51 (82.35%), Postives = 48/51 (94.12%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSK+INDRETGRSRGFGFVTF ++M+DAIEGMNGQD+DGR+ITVNEAQS Sbjct: 36 DSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQS 86
BLAST of GR916648 vs. SwissProt
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.075e-17 Identity = 41/51 (80.39%), Postives = 47/51 (92.16%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSK+I DRETGRSRGFGFVTF++ ++MR AIE MNGQD+DGRNITVNEAQS Sbjct: 34 DSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQS 84
BLAST of GR916648 vs. SwissProt
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.396e-17 Identity = 42/51 (82.35%), Postives = 47/51 (92.16%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSKVI DRETGRSRGFGFVTFS+ QSM DAIE MNG+++DGRNITVN+AQS Sbjct: 36 DSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQS 86
BLAST of GR916648 vs. SwissProt
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.104e-17 Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSKVI DRETGRSRGFGFVTFS+ SM DAIE MNG+++DGRNITVN+AQS Sbjct: 36 DSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQS 86
BLAST of GR916648 vs. SwissProt
Match: GRP1_SORBI (Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum bicolor GN=GRP1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.028e-16 Identity = 40/51 (78.43%), Postives = 47/51 (92.16%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 +SK+I DRET RSRGFGFVTFST ++MR AIEGMNG+++DGRNITVNEAQS Sbjct: 15 ESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQS 65
BLAST of GR916648 vs. SwissProt
Match: GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.649e-16 Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSK+INDRETGRSRGFGFVTF +SM+DAI+ MNG+++DGR ITVNEAQS Sbjct: 34 DSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQS 84
BLAST of GR916648 vs. SwissProt
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.707e-16 Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSK+INDRE+GRSRGFGFVTF ++MRDAIE MNG+++DGR ITVNEAQS Sbjct: 34 DSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQS 84
BLAST of GR916648 vs. TrEMBL
Match: Q8RW11_RUMOB (Putative glycine rich protein OS=Rumex obtusifolius GN=grp PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.416e-18 Identity = 45/51 (88.24%), Postives = 50/51 (98.04%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 +SK+INDRETGRSRGFGFVTFS+ Q+MRDAIEGMNGQD+DGRNITVNEAQS Sbjct: 35 ESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGQDLDGRNITVNEAQS 85
BLAST of GR916648 vs. TrEMBL
Match: Q6ASX7_ORYSJ (Glycine-rich RNA binding protein OS=Oryza sativa subsp. japonica GN=B1130H05.5 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.850e-18 Identity = 45/51 (88.24%), Postives = 50/51 (98.04%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSK+INDRETGRSRGFGFVTFS+ QSMRDAIEGMNG+++DGRNITVNEAQS Sbjct: 36 DSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEAQS 86
BLAST of GR916648 vs. TrEMBL
Match: Q10FE7_ORYSJ (Os03g0670700 protein OS=Oryza sativa subsp. japonica GN=Os03g0670700 PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.850e-18 Identity = 45/51 (88.24%), Postives = 50/51 (98.04%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSK+INDRETGRSRGFGFVTFS+ QSMRDAIEGMNG+++DGRNITVNEAQS Sbjct: 36 DSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEAQS 86
BLAST of GR916648 vs. TrEMBL
Match: Q10FE5_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g46770 PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.850e-18 Identity = 45/51 (88.24%), Postives = 50/51 (98.04%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSK+INDRETGRSRGFGFVTFS+ QSMRDAIEGMNG+++DGRNITVNEAQS Sbjct: 36 DSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEAQS 86
BLAST of GR916648 vs. TrEMBL
Match: B8AP37_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12955 PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.850e-18 Identity = 45/51 (88.24%), Postives = 50/51 (98.04%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSK+INDRETGRSRGFGFVTFS+ QSMRDAIEGMNG+++DGRNITVNEAQS Sbjct: 36 DSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEAQS 86
BLAST of GR916648 vs. TrEMBL
Match: Q25C92_LOLPR (Glycine-rich RNA-binding protein OS=Lolium perenne PE=4 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.416e-18 Identity = 44/52 (84.62%), Postives = 50/52 (96.15%), Query Frame = -2 Query: 244 TDSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 399 TD K+INDRETGRSRGFGFVTFS+ +SM++AIEGMNGQD+DGRNITVNEAQS Sbjct: 32 TDCKIINDRETGRSRGFGFVTFSSSESMKNAIEGMNGQDLDGRNITVNEAQS 83
BLAST of GR916648 vs. TrEMBL
Match: O24106_NICGU (RNA-binding protein OS=Nicotiana glutinosa PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.416e-18 Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSK+INDRETGRSRGFGFVTF Q+MRDAIEGMNGQD+DGRNITVNEAQS Sbjct: 34 DSKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQS 84
BLAST of GR916648 vs. TrEMBL
Match: D7TQ21_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_63.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031973001 PE=4 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.416e-18 Identity = 45/51 (88.24%), Postives = 50/51 (98.04%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 +SK+INDRETGRSRGFGFVTFS+ QSMRDAIEGMNGQ++DGRNITVNEAQS Sbjct: 36 ESKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQNLDGRNITVNEAQS 86
BLAST of GR916648 vs. TrEMBL
Match: B2YKT9_TOBAC (Glycine-rich RNA-binding protein OS=Nicotiana tabacum GN=GRP1 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.416e-18 Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSK+INDRETGRSRGFGFVTF Q+MRDAIEGMNGQD+DGRNITVNEAQS Sbjct: 34 DSKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQS 84
BLAST of GR916648 vs. TrEMBL
Match: Q40426_NICSY (RNA-binding glycine-rich protein-1a OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.028e-18 Identity = 44/51 (86.27%), Postives = 48/51 (94.12%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSK+INDRETGRSRGFGFVTF ++MRDAIEGMNGQD+DGRNITVNEAQS Sbjct: 34 DSKIINDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLDGRNITVNEAQS 84
BLAST of GR916648 vs. TAIR peptide
Match: AT2G21660.2 (| Symbols: ATGRP7, CCR2 | cold, circadian rhythm, and rna binding 2 | chr2:9265477-9266316 REVERSE LENGTH=159) HSP 1 Score: 90.5077 bits (223), Expect = 3.148e-19 Identity = 42/51 (82.35%), Postives = 48/51 (94.12%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSK+INDRETGRSRGFGFVTF ++M+DAIEGMNGQD+DGR+ITVNEAQS Sbjct: 36 DSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQS 86
BLAST of GR916648 vs. TAIR peptide
Match: AT2G21660.1 (| Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | cold, circadian rhythm, and rna binding 2 | chr2:9265477-9266316 REVERSE LENGTH=176) HSP 1 Score: 90.5077 bits (223), Expect = 3.148e-19 Identity = 42/51 (82.35%), Postives = 48/51 (94.12%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSK+INDRETGRSRGFGFVTF ++M+DAIEGMNGQD+DGR+ITVNEAQS Sbjct: 36 DSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQS 86
BLAST of GR916648 vs. TAIR peptide
Match: AT4G39260.3 (| Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circadian rhythm, and RNA binding 1 | chr4:18274166-18274958 REVERSE LENGTH=92) HSP 1 Score: 82.4185 bits (202), Expect = 8.573e-17 Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSK+INDRE+GRSRGFGFVTF ++MRDAIE MNG+++DGR ITVNEAQS Sbjct: 34 DSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQS 84
BLAST of GR916648 vs. TAIR peptide
Match: AT4G39260.2 (| Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circadian rhythm, and RNA binding 1 | chr4:18274166-18274958 REVERSE LENGTH=126) HSP 1 Score: 82.4185 bits (202), Expect = 8.573e-17 Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSK+INDRE+GRSRGFGFVTF ++MRDAIE MNG+++DGR ITVNEAQS Sbjct: 34 DSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQS 84
BLAST of GR916648 vs. TAIR peptide
Match: AT4G39260.1 (| Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circadian rhythm, and RNA binding 1 | chr4:18274166-18274958 REVERSE LENGTH=169) HSP 1 Score: 82.4185 bits (202), Expect = 8.573e-17 Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 DSK+INDRE+GRSRGFGFVTF ++MRDAIE MNG+++DGR ITVNEAQS Sbjct: 34 DSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQS 84
BLAST of GR916648 vs. TAIR peptide
Match: AT3G26420.1 (| Symbols: ATRZ-1A | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain | chr3:9671953-9673055 FORWARD LENGTH=245) HSP 1 Score: 63.1586 bits (152), Expect = 5.382e-11 Identity = 28/50 (56.00%), Postives = 40/50 (80.00%), Query Frame = -2 Query: 247 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQ 396 ++KV+ D+ +GRSRGFGF+TF ++M +AI MNG D+DGR ITV++AQ Sbjct: 35 EAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAAMNGMDLDGRTITVDKAQ 84
BLAST of GR916648 vs. TAIR peptide
Match: AT3G53460.4 (| Symbols: CP29 | chloroplast RNA-binding protein 29 | chr3:19819738-19821423 REVERSE LENGTH=363) HSP 1 Score: 62.7734 bits (151), Expect = 7.029e-11 Identity = 27/51 (52.94%), Postives = 41/51 (80.39%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 +++VI DR++GRS+GFGFVT S+ Q ++ AI +NG D+DGR I V+EA++ Sbjct: 306 EARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEA 356
BLAST of GR916648 vs. TAIR peptide
Match: AT3G53460.3 (| Symbols: CP29 | chloroplast RNA-binding protein 29 | chr3:19819738-19821423 REVERSE LENGTH=342) HSP 1 Score: 62.7734 bits (151), Expect = 7.029e-11 Identity = 27/51 (52.94%), Postives = 41/51 (80.39%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 +++VI DR++GRS+GFGFVT S+ Q ++ AI +NG D+DGR I V+EA++ Sbjct: 285 EARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEA 335
BLAST of GR916648 vs. TAIR peptide
Match: AT3G53460.2 (| Symbols: CP29 | chloroplast RNA-binding protein 29 | chr3:19819738-19821423 REVERSE LENGTH=342) HSP 1 Score: 62.7734 bits (151), Expect = 7.029e-11 Identity = 27/51 (52.94%), Postives = 41/51 (80.39%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 +++VI DR++GRS+GFGFVT S+ Q ++ AI +NG D+DGR I V+EA++ Sbjct: 285 EARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEA 335
BLAST of GR916648 vs. TAIR peptide
Match: AT3G53460.1 (| Symbols: CP29 | chloroplast RNA-binding protein 29 | chr3:19819738-19821423 REVERSE LENGTH=342) HSP 1 Score: 62.7734 bits (151), Expect = 7.029e-11 Identity = 27/51 (52.94%), Postives = 41/51 (80.39%), Query Frame = -2 Query: 244 DSKVINDRETGRSRGFGFVTFSTGQSMRDAIEGMNGQDVDGRNITVNEAQS 396 +++VI DR++GRS+GFGFVT S+ Q ++ AI +NG D+DGR I V+EA++ Sbjct: 285 EARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEA 335 The following BLAST results are available for this feature:
BLAST of GR916648 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 10
BLAST of GR916648 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR916648 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 10
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR916648 ID=GR916648; Name=GR916648; organism=Cicer arietinum; type=EST; length=400bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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