HO067193
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO067193 vs. SwissProt
Match: MDHC_MEDSA (Malate dehydrogenase, cytoplasmic OS=Medicago sativa GN=CMDH PE=2 SV=1) HSP 1 Score: 46.595 bits (109), Expect = 1.353e-8 Identity = 26/55 (47.27%), Postives = 28/55 (50.91%), Query Frame = -3 Query: 156 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXSXXS 320 YN P G IYS P W+ VQ LS FSR+KL TAEEL L S S Sbjct: 278 YNVPSGLIYSFPVTCANGEWKIVQGLSIDEFSRKKLDLTAEELTEEKNLAHSCLS 332 HSP 2 Score: 31.5722 bits (70), Expect = 1.353e-8 Identity = 14/23 (60.87%), Postives = 16/23 (69.57%), Query Frame = -2 Query: 304 GTREGTWVSMGVYXDGSIQXXXG 372 GT +GT+VSMGVY DGS G Sbjct: 261 GTPQGTFVSMGVYSDGSYNVPSG 283
BLAST of HO067193 vs. SwissProt
Match: MDHC_BETVU (Malate dehydrogenase, cytoplasmic OS=Beta vulgaris GN=NR1 PE=1 SV=1) HSP 1 Score: 41.2022 bits (95), Expect = 1.754e-8 Identity = 22/52 (42.31%), Postives = 25/52 (48.08%), Query Frame = -3 Query: 165 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXS 320 YN P G IYS P W+ VQ L SRQK+ +T EL AL S Sbjct: 278 YNVPAGIIYSFPVTCKDGEWKIVQGLPIDEVSRQKMDATGAELVEEKALAYS 329 HSP 2 Score: 36.5798 bits (83), Expect = 1.754e-8 Identity = 16/23 (69.57%), Postives = 16/23 (69.57%), Query Frame = -2 Query: 304 GTREGTWVSMGVYXDGSIQXXXG 372 GT EGTWVSMGVY DGS G Sbjct: 261 GTPEGTWVSMGVYSDGSYNVPAG 283
BLAST of HO067193 vs. SwissProt
Match: MDHC_MESCR (Malate dehydrogenase, cytoplasmic OS=Mesembryanthemum crystallinum GN=MDH PE=2 SV=1) HSP 1 Score: 38.5058 bits (88), Expect = 1.078e-7 Identity = 21/52 (40.38%), Postives = 24/52 (46.15%), Query Frame = -3 Query: 165 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXS 320 YN P G IYS P W VQ L SR+K+ +TA EL L S Sbjct: 278 YNVPAGIIYSFPVTCKNGEWTIVQGLPIDDDSRKKMDATAAELVEEKTLAYS 329 HSP 2 Score: 36.5798 bits (83), Expect = 1.078e-7 Identity = 16/23 (69.57%), Postives = 16/23 (69.57%), Query Frame = -2 Query: 304 GTREGTWVSMGVYXDGSIQXXXG 372 GT EGTWVSMGVY DGS G Sbjct: 261 GTPEGTWVSMGVYSDGSYNVPAG 283
BLAST of HO067193 vs. SwissProt
Match: MDHC_MAIZE (Malate dehydrogenase, cytoplasmic OS=Zea mays PE=2 SV=2) HSP 1 Score: 40.817 bits (94), Expect = 5.104e-7 Identity = 21/52 (40.38%), Postives = 26/52 (50.00%), Query Frame = -3 Query: 165 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXS 320 Y P G IYS P W+ VQ L FSR+K+ +TA+EL L S Sbjct: 278 YGVPSGLIYSFPVTCSGGEWKIVQGLPIDEFSRKKMDATAQELTEEKTLAYS 329 HSP 2 Score: 31.9574 bits (71), Expect = 5.104e-7 Identity = 14/17 (82.35%), Postives = 15/17 (88.24%), Query Frame = -2 Query: 322 GTREGTWVSMGVYXDGS 372 GT EGT+VSMGVY DGS Sbjct: 261 GTPEGTFVSMGVYSDGS 277
BLAST of HO067193 vs. SwissProt
Match: MDHC2_ARATH (Malate dehydrogenase, cytoplasmic 2 OS=Arabidopsis thaliana GN=At5g43330 PE=2 SV=1) HSP 1 Score: 40.0466 bits (92), Expect = 5.104e-7 Identity = 23/55 (41.82%), Postives = 25/55 (45.45%), Query Frame = -3 Query: 156 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXSXXS 320 YN P G IYS P W VQ L SR+K+ TAEEL L S S Sbjct: 278 YNVPAGLIYSFPVTCRNGEWTIVQGLPIDDASRKKMDLTAEELKEEKDLAYSCLS 332 HSP 2 Score: 32.7278 bits (73), Expect = 5.104e-7 Identity = 15/23 (65.22%), Postives = 16/23 (69.57%), Query Frame = -2 Query: 304 GTREGTWVSMGVYXDGSIQXXXG 372 GT EGT+VSMGVY DGS G Sbjct: 261 GTPEGTFVSMGVYSDGSYNVPAG 283
BLAST of HO067193 vs. SwissProt
Match: MDHC_ORYSJ (Malate dehydrogenase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os10g0478200 PE=1 SV=3) HSP 1 Score: 40.0466 bits (92), Expect = 8.565e-7 Identity = 21/52 (40.38%), Postives = 25/52 (48.08%), Query Frame = -3 Query: 165 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXS 320 Y P G IYS P W VQ L FSR+K+ +TA+EL L S Sbjct: 278 YGVPAGLIYSFPVTCSGGEWTIVQGLPIDEFSRKKMDATAQELSEEKTLAYS 329 HSP 2 Score: 31.9574 bits (71), Expect = 8.565e-7 Identity = 14/17 (82.35%), Postives = 15/17 (88.24%), Query Frame = -2 Query: 322 GTREGTWVSMGVYXDGS 372 GT EGT+VSMGVY DGS Sbjct: 261 GTPEGTFVSMGVYSDGS 277
BLAST of HO067193 vs. TrEMBL
Match: B9T5E4_RICCO (Malate dehydrogenase OS=Ricinus communis GN=RCOM_0400340 PE=3 SV=1) HSP 1 Score: 51.2174 bits (121), Expect = 4.125e-10 Identity = 28/55 (50.91%), Postives = 30/55 (54.55%), Query Frame = -3 Query: 156 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXSXXS 320 YN P G IYS P W+ VQ LS FSR+KL STAEEL AL S S Sbjct: 278 YNVPSGLIYSFPVTCQNGEWKIVQGLSIDEFSRKKLDSTAEELSEEKALAYSCLS 332 HSP 2 Score: 36.5798 bits (83), Expect = 4.125e-10 Identity = 16/23 (69.57%), Postives = 16/23 (69.57%), Query Frame = -2 Query: 304 GTREGTWVSMGVYXDGSIQXXXG 372 GT EGTWVSMGVY DGS G Sbjct: 261 GTPEGTWVSMGVYSDGSYNVPSG 283
BLAST of HO067193 vs. TrEMBL
Match: Q946Y0_PRUPE (Malate dehydrogenase OS=Prunus persica GN=mdh1 PE=2 SV=1) HSP 1 Score: 48.9062 bits (115), Expect = 1.972e-9 Identity = 26/55 (47.27%), Postives = 30/55 (54.55%), Query Frame = -3 Query: 156 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXSXXS 320 YN P G IYS P W+ VQ LS FSR+KL +TA+EL AL S S Sbjct: 278 YNVPSGLIYSFPVTCQNGEWKIVQGLSIDEFSRKKLDATADELSEEKALAYSCLS 332 HSP 2 Score: 36.5798 bits (83), Expect = 1.972e-9 Identity = 16/23 (69.57%), Postives = 16/23 (69.57%), Query Frame = -2 Query: 304 GTREGTWVSMGVYXDGSIQXXXG 372 GT EGTWVSMGVY DGS G Sbjct: 261 GTPEGTWVSMGVYSDGSYNVPSG 283
BLAST of HO067193 vs. TrEMBL
Match: Q8GZN2_LUPAL (Malate dehydrogenase OS=Lupinus albus GN=MDH2 PE=2 SV=1) HSP 1 Score: 47.7506 bits (112), Expect = 4.308e-9 Identity = 26/55 (47.27%), Postives = 29/55 (52.73%), Query Frame = -3 Query: 156 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXSXXS 320 YN P G IYS P W+ VQ L+ FSR+KL TAEEL AL S S Sbjct: 278 YNVPAGLIYSFPVTTQNGEWKIVQGLAIDEFSRKKLDLTAEELSEEKALAYSCLS 332 HSP 2 Score: 36.5798 bits (83), Expect = 4.308e-9 Identity = 16/23 (69.57%), Postives = 16/23 (69.57%), Query Frame = -2 Query: 304 GTREGTWVSMGVYXDGSIQXXXG 372 GT EGTWVSMGVY DGS G Sbjct: 261 GTPEGTWVSMGVYSDGSYNVPAG 283
BLAST of HO067193 vs. TrEMBL
Match: A9P8R3_POPTR (Malate dehydrogenase OS=Populus trichocarpa GN=POPTRDRAFT_564942 PE=2 SV=1) HSP 1 Score: 47.7506 bits (112), Expect = 4.308e-9 Identity = 26/55 (47.27%), Postives = 29/55 (52.73%), Query Frame = -3 Query: 156 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXSXXS 320 YN P G IYS P W+ VQ LS FSR+KL TA+EL AL S S Sbjct: 278 YNVPAGLIYSFPVTCQNGEWKIVQGLSIDEFSRKKLDLTADELSEEKALAYSCLS 332 HSP 2 Score: 36.5798 bits (83), Expect = 4.308e-9 Identity = 16/23 (69.57%), Postives = 16/23 (69.57%), Query Frame = -2 Query: 304 GTREGTWVSMGVYXDGSIQXXXG 372 GT EGTWVSMGVY DGS G Sbjct: 261 GTPEGTWVSMGVYSDGSYNVPAG 283
BLAST of HO067193 vs. TrEMBL
Match: Q9FSF0_TOBAC (Malate dehydrogenase OS=Nicotiana tabacum GN=md1 PE=2 SV=1) HSP 1 Score: 46.9802 bits (110), Expect = 7.252e-9 Identity = 25/52 (48.08%), Postives = 27/52 (51.92%), Query Frame = -3 Query: 165 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXS 320 YN P G IYS P W VQ L FSR+KL +TAEEL AL S Sbjct: 278 YNVPAGLIYSFPVACKNGEWSIVQGLPIDEFSRKKLDATAEELSEEKALAYS 329 HSP 2 Score: 36.5798 bits (83), Expect = 7.252e-9 Identity = 16/23 (69.57%), Postives = 16/23 (69.57%), Query Frame = -2 Query: 304 GTREGTWVSMGVYXDGSIQXXXG 372 GT EGTWVSMGVY DGS G Sbjct: 261 GTPEGTWVSMGVYSDGSYNVPAG 283
BLAST of HO067193 vs. TrEMBL
Match: B9NBW3_POPTR (Malate dehydrogenase OS=Populus trichocarpa GN=POPTRDRAFT_747123 PE=3 SV=1) HSP 1 Score: 46.9802 bits (110), Expect = 7.252e-9 Identity = 25/52 (48.08%), Postives = 28/52 (53.85%), Query Frame = -3 Query: 165 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXS 320 YN P G IYS P W+ VQ LS FSR+KL TA+EL AL S Sbjct: 278 YNVPAGLIYSFPVTCQNGEWKIVQGLSIDEFSRKKLDLTADELSEEKALAYS 329 HSP 2 Score: 36.5798 bits (83), Expect = 7.252e-9 Identity = 16/23 (69.57%), Postives = 16/23 (69.57%), Query Frame = -2 Query: 304 GTREGTWVSMGVYXDGSIQXXXG 372 GT EGTWVSMGVY DGS G Sbjct: 261 GTPEGTWVSMGVYSDGSYNVPAG 283
BLAST of HO067193 vs. TrEMBL
Match: A3DSX0_MALDO (Malate dehydrogenase OS=Malus domestica PE=2 SV=1) HSP 1 Score: 45.8246 bits (107), Expect = 1.584e-8 Identity = 25/55 (45.45%), Postives = 30/55 (54.55%), Query Frame = -3 Query: 156 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXSXXS 320 Y+ P G I+S P W+ VQ LS FSR+KL +TAEEL AL S S Sbjct: 278 YDVPSGLIFSFPVTCQHGEWKIVQGLSIDEFSRKKLDATAEELSEEKALAYSCLS 332 HSP 2 Score: 36.5798 bits (83), Expect = 1.584e-8 Identity = 16/23 (69.57%), Postives = 16/23 (69.57%), Query Frame = -2 Query: 304 GTREGTWVSMGVYXDGSIQXXXG 372 GT EGTWVSMGVY DGS G Sbjct: 261 GTPEGTWVSMGVYSDGSYDVPSG 283
BLAST of HO067193 vs. TrEMBL
Match: Q6RIB6_SOYBN (Malate dehydrogenase OS=Glycine max PE=2 SV=1) HSP 1 Score: 45.8246 bits (107), Expect = 3.456e-8 Identity = 25/52 (48.08%), Postives = 27/52 (51.92%), Query Frame = -3 Query: 165 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXS 320 YN P G IYS P W VQ LS FSR+KL TA+EL AL S Sbjct: 278 YNVPAGLIYSFPVTCANGEWAIVQGLSIDEFSRKKLDLTAKELFEEKALAYS 329 HSP 2 Score: 35.4242 bits (80), Expect = 3.456e-8 Identity = 15/23 (65.22%), Postives = 16/23 (69.57%), Query Frame = -2 Query: 304 GTREGTWVSMGVYXDGSIQXXXG 372 GT +GTWVSMGVY DGS G Sbjct: 261 GTPQGTWVSMGVYSDGSYNVPAG 283
BLAST of HO067193 vs. TrEMBL
Match: Q8GZN3_LUPAL (Malate dehydrogenase OS=Lupinus albus GN=MDH1 PE=2 SV=1) HSP 1 Score: 46.595 bits (109), Expect = 4.483e-8 Identity = 25/52 (48.08%), Postives = 27/52 (51.92%), Query Frame = -3 Query: 165 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXS 320 YN P G IYS P W+ VQ L FSR+KL TAEEL AL S Sbjct: 278 YNVPAGLIYSFPVTTQNGEWKIVQGLGIDEFSRKKLDLTAEELSEEKALAYS 329 HSP 2 Score: 34.2686 bits (77), Expect = 4.483e-8 Identity = 15/23 (65.22%), Postives = 15/23 (65.22%), Query Frame = -2 Query: 304 GTREGTWVSMGVYXDGSIQXXXG 372 GT EG WVSMGVY DGS G Sbjct: 261 GTPEGIWVSMGVYSDGSYNVPAG 283
BLAST of HO067193 vs. TrEMBL
Match: D7FBC0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028330001 PE=4 SV=1) HSP 1 Score: 43.8986 bits (102), Expect = 5.815e-8 Identity = 24/55 (43.64%), Postives = 27/55 (49.09%), Query Frame = -3 Query: 156 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXSXXS 320 YN P G IYS P W+ VQ L FSR+KL TA+EL L S S Sbjct: 278 YNVPAGLIYSFPVTCCAGEWKIVQGLHIDEFSRKKLDLTAQELSEEKELAYSCLS 332 HSP 2 Score: 36.5798 bits (83), Expect = 5.815e-8 Identity = 16/23 (69.57%), Postives = 16/23 (69.57%), Query Frame = -2 Query: 304 GTREGTWVSMGVYXDGSIQXXXG 372 GT EGTWVSMGVY DGS G Sbjct: 261 GTPEGTWVSMGVYSDGSYNVPAG 283
BLAST of HO067193 vs. TAIR peptide
Match: AT5G43330.1 (| Symbols: | Lactate/malate dehydrogenase family protein | chr5:17390552-17392449 FORWARD LENGTH=332) HSP 1 Score: 40.0466 bits (92), Expect = 4.498e-8 Identity = 23/55 (41.82%), Postives = 25/55 (45.45%), Query Frame = -3 Query: 156 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXSXXS 320 YN P G IYS P W VQ L SR+K+ TAEEL L S S Sbjct: 278 YNVPAGLIYSFPVTCRNGEWTIVQGLPIDDASRKKMDLTAEELKEEKDLAYSCLS 332 HSP 2 Score: 32.7278 bits (73), Expect = 4.498e-8 Identity = 15/23 (65.22%), Postives = 16/23 (69.57%), Query Frame = -2 Query: 304 GTREGTWVSMGVYXDGSIQXXXG 372 GT EGT+VSMGVY DGS G Sbjct: 261 GTPEGTFVSMGVYSDGSYNVPAG 283
BLAST of HO067193 vs. TAIR peptide
Match: AT1G04410.1 (| Symbols: | Lactate/malate dehydrogenase family protein | chr1:1189418-1191267 REVERSE LENGTH=332) HSP 1 Score: 38.891 bits (89), Expect = 9.777e-8 Identity = 22/55 (40.00%), Postives = 25/55 (45.45%), Query Frame = -3 Query: 156 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXSXXS 320 Y+ P G IYS P W VQ L SR+K+ TAEEL L S S Sbjct: 278 YSVPSGLIYSFPVTCRNGDWSIVQGLPIDEVSRKKMDLTAEELKEEKDLAYSCLS 332 HSP 2 Score: 32.7278 bits (73), Expect = 9.777e-8 Identity = 15/23 (65.22%), Postives = 16/23 (69.57%), Query Frame = -2 Query: 304 GTREGTWVSMGVYXDGSIQXXXG 372 GT EGT+VSMGVY DGS G Sbjct: 261 GTPEGTFVSMGVYSDGSYSVPSG 283
BLAST of HO067193 vs. TAIR peptide
Match: AT5G56720.1 (| Symbols: | Lactate/malate dehydrogenase family protein | chr5:22945537-22946718 FORWARD LENGTH=339) HSP 1 Score: 39.6614 bits (91), Expect = 2.122e-7 Identity = 20/52 (38.46%), Postives = 25/52 (48.08%), Query Frame = -3 Query: 165 YNXPXGXIYSXPXXXXTXXWQXVQXLSXXXFSRQKLASTAEELXAXXALVXS 320 Y P G +YS P W+ VQ LS FSR+K+ +A EL L S Sbjct: 284 YGIPPGLVYSFPVICEKGSWKIVQGLSIDEFSREKMDDSARELAEEKDLAYS 335 HSP 2 Score: 30.8018 bits (68), Expect = 2.122e-7 Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = -2 Query: 322 GTREGTWVSMGVYXDGS 372 GT +GTWVSMGV DGS Sbjct: 267 GTPKGTWVSMGVCSDGS 283 The following BLAST results are available for this feature:
BLAST of HO067193 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 6
BLAST of HO067193 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of HO067193 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO067193 ID=HO067193; Name=HO067193; organism=Cicer arietinum; type=EST; length=373bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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