CD051311
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CD051311 vs. SwissProt
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 1.068e-12 Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 +GR G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN Sbjct: 225 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 266
BLAST of CD051311 vs. SwissProt
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 1.068e-12 Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 +GR G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN Sbjct: 230 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 271
BLAST of CD051311 vs. SwissProt
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.395e-12 Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 3 Query: 12 GRPGRYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN Sbjct: 242 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 279
BLAST of CD051311 vs. SwissProt
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.380e-12 Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 +GR G +YTVNNQMVNATLMNI DNPTNVQLPGMYNK+DN Sbjct: 232 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDN 273
BLAST of CD051311 vs. SwissProt
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 3.108e-12 Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 +GR G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKE+N Sbjct: 234 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN 275
BLAST of CD051311 vs. SwissProt
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.108e-12 Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 +GR G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKE+N Sbjct: 234 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN 275
BLAST of CD051311 vs. SwissProt
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.108e-12 Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 +GR G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKE+N Sbjct: 234 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN 275
BLAST of CD051311 vs. SwissProt
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 4.059e-12 Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 3 Query: 12 GRPGRYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKE+N Sbjct: 240 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN 277
BLAST of CD051311 vs. SwissProt
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.059e-12 Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 3 Query: 12 GRPGRYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKE+N Sbjct: 238 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN 275
BLAST of CD051311 vs. SwissProt
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.059e-12 Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 3 Query: 12 GRPGRYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKE+N Sbjct: 235 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN 272
BLAST of CD051311 vs. TrEMBL
Match: Q9FUI0_MAIZE (Ribulose 1,5-bisphosphate carboxylase/oxygenase activase (Fragment) OS=Zea mays PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.168e-11 Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 +GR G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN Sbjct: 105 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 146
BLAST of CD051311 vs. TrEMBL
Match: Q8GTY4_MEDSA (Rubisco activase (Fragment) OS=Medicago sativa GN=Rca PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.168e-11 Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 +GR G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN Sbjct: 69 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 110
BLAST of CD051311 vs. TrEMBL
Match: C0P5X1_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.168e-11 Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 +GR G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN Sbjct: 180 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 221
BLAST of CD051311 vs. TrEMBL
Match: B8BIM0_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37096 PE=4 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.168e-11 Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 +GR G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN Sbjct: 225 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 266
BLAST of CD051311 vs. TrEMBL
Match: B6T416_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase OS=Zea mays PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.168e-11 Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 +GR G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN Sbjct: 230 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 271
BLAST of CD051311 vs. TrEMBL
Match: A6N1P5_ORYSI (Ribulose bisphosphate carboxylase/oxygenase activase (Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.168e-11 Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 +GR G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN Sbjct: 65 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 106
BLAST of CD051311 vs. TrEMBL
Match: B9HMK4_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_421185 PE=4 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.831e-11 Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 3 Query: 12 GRPGRYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN Sbjct: 241 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 278
BLAST of CD051311 vs. TrEMBL
Match: A9PJF4_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.831e-11 Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 3 Query: 12 GRPGRYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN Sbjct: 241 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 278
BLAST of CD051311 vs. TrEMBL
Match: A9PJ06_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.831e-11 Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 3 Query: 12 GRPGRYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN Sbjct: 240 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 277
BLAST of CD051311 vs. TrEMBL
Match: A9PG25_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.831e-11 Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 3 Query: 12 GRPGRYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKEDN Sbjct: 162 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDN 199
BLAST of CD051311 vs. TAIR peptide
Match: AT2G39730.3 (| Symbols: RCA | rubisco activase | chr2:16571174-16573345 REVERSE LENGTH=441) HSP 1 Score: 70.4774 bits (171), Expect = 2.482e-13 Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 +GR G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKE+N Sbjct: 234 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN 275
BLAST of CD051311 vs. TAIR peptide
Match: AT2G39730.2 (| Symbols: RCA | rubisco activase | chr2:16571046-16573345 REVERSE LENGTH=446) HSP 1 Score: 70.4774 bits (171), Expect = 2.482e-13 Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 +GR G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKE+N Sbjct: 234 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN 275
BLAST of CD051311 vs. TAIR peptide
Match: AT2G39730.1 (| Symbols: RCA | rubisco activase | chr2:16570951-16573345 REVERSE LENGTH=474) HSP 1 Score: 70.4774 bits (171), Expect = 2.482e-13 Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 9 SGRPG---RYTVNNQMVNATLMNIVDNPTNVQLPGMYNKEDN 125 +GR G +YTVNNQMVNATLMNI DNPTNVQLPGMYNKE+N Sbjct: 234 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN 275 The following BLAST results are available for this feature:
BLAST of CD051311 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 10
BLAST of CD051311 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of CD051311 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CD051311 ID=CD051311; Name=CD051311; organism=Cicer arietinum; type=EST; length=158bpback to top |