HO062259
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO062259 vs. TrEMBL
Match: B9RNU3_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_0920760 PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.046e-31 Identity = 69/90 (76.67%), Postives = 70/90 (77.78%), Query Frame = 2 Query: 137 MSSFSITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDNAPGSKTFVRGGTINPNDKLKDDSEGEKSKDGVSGPKKGSRYAPA 406 MSSFSITRKKTPFQKH LYAEFVESFQGDNAPGSKTFVRGGTINPNDKLK DSEGEKSKDGVS PKKGSRY P+ Sbjct: 1 MSSFSITRKKTPFQKHREEEEAKKKREDDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNDKLKTDSEGEKSKDGVSVPKKGSRYVPS 90
BLAST of HO062259 vs. TrEMBL
Match: B9HB72_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819630 PE=4 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.497e-30 Identity = 67/90 (74.44%), Postives = 70/90 (77.78%), Query Frame = 2 Query: 137 MSSFSITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDNAPGSKTFVRGGTINPNDKLKDDSEGEKSKDGVSGPKKGSRYAPA 406 MSSFSITRKKTPFQKH LYAEFVESFQGDNAPGSKTFVRGGTINPN+KLK D+EGEKSKDGVS PKKGSRY P+ Sbjct: 1 MSSFSITRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNEKLKSDAEGEKSKDGVSVPKKGSRYVPS 90
BLAST of HO062259 vs. TrEMBL
Match: B9IL77_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_825788 PE=4 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.018e-29 Identity = 67/90 (74.44%), Postives = 70/90 (77.78%), Query Frame = 2 Query: 137 MSSFSITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDNAPGSKTFVRGGTINPNDKLKDDSEGEKSKDGVSGPKKGSRYAPA 406 MSSFSITRKKTPFQKH LYAEFVESFQGDNAPGSKTFVRGGTINPN+KLK DS+GEKSKDGVS PKKGSRY P+ Sbjct: 1 MSSFSITRKKTPFQKHREEEEARKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNEKLKIDSKGEKSKDGVSVPKKGSRYVPS 90
BLAST of HO062259 vs. TrEMBL
Match: D7SV56_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035985001 PE=4 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.960e-29 Identity = 65/90 (72.22%), Postives = 70/90 (77.78%), Query Frame = 2 Query: 137 MSSFSITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDNAPGSKTFVRGGTINPNDKLKDDSEGEKSKDGVSGPKKGSRYAPA 406 MSSFSITRKKTPFQKH LYAEFVESFQGDNAPGSKTFVRGGTINPN+++K +SEGEKSKDGVS PKKGSRY P+ Sbjct: 1 MSSFSITRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNERVKTESEGEKSKDGVSVPKKGSRYVPS 90
BLAST of HO062259 vs. TrEMBL
Match: Q9C5J3_ARATH (Putative uncharacterized protein At5g25060 OS=Arabidopsis thaliana GN=At5g25060 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.859e-23 Identity = 61/90 (67.78%), Postives = 63/90 (70.00%), Query Frame = 2 Query: 137 MSSFSITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDNAPGSKTFVRGGTINPNDKLKDDSEGEKSKDGVSGPKKGSRYAPA 406 MSSFSITRKKTPFQKH LY EFVESFQGDNA +KTFVRGGTINP DK K DSEGEKSKDG S KKGSRY P+ Sbjct: 1 MSSFSITRKKTPFQKHREEEEARKKKAEDETARLYQEFVESFQGDNAT-TKTFVRGGTINPGDKPKVDSEGEKSKDGGSVSKKGSRYVPS 89
BLAST of HO062259 vs. TrEMBL
Match: D7M3T9_ARALY (RNA recognition motif-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_910548 PE=4 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.859e-23 Identity = 61/90 (67.78%), Postives = 63/90 (70.00%), Query Frame = 2 Query: 137 MSSFSITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDNAPGSKTFVRGGTINPNDKLKDDSEGEKSKDGVSGPKKGSRYAPA 406 MSSFSITRKKTPFQKH LY EFVESFQGDNA +KTFVRGGTINP DK K DSEGEKSKDG S KKGSRY P+ Sbjct: 1 MSSFSITRKKTPFQKHREEEEARKKKAEDETARLYQEFVESFQGDNAT-TKTFVRGGTINPGDKPKVDSEGEKSKDGGSVSKKGSRYVPS 89
BLAST of HO062259 vs. TrEMBL
Match: A5BQS1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025939 PE=4 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 5.979e-22 Identity = 50/57 (87.72%), Postives = 54/57 (94.74%), Query Frame = 2 Query: 236 LYAEFVESFQGDNAPGSKTFVRGGTINPNDKLKDDSEGEKSKDGVSGPKKGSRYAPA 406 LYAEFVESFQGDNAPGSKTFVRGGTINPN++LK +SEGEKSKDGVS PKKGSRY P+ Sbjct: 152 LYAEFVESFQGDNAPGSKTFVRGGTINPNERLKTESEGEKSKDGVSVPKKGSRYVPS 208
BLAST of HO062259 vs. TrEMBL
Match: C5XWU9_SORBI (Putative uncharacterized protein Sb04g005430 OS=Sorghum bicolor GN=Sb04g005430 PE=4 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.874e-16 Identity = 46/85 (54.12%), Postives = 56/85 (65.88%), Query Frame = 2 Query: 152 ITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDNAPGSKTFVRGGTINPNDKLKDDSEGEKSKDGVSGPKKGSRYAPA 406 ++ KK P+ KH +YAEFVESF+GD++ G+K FVRGG I+PN KLK DSEG KSKDG S PKKGSRY P+ Sbjct: 1 MSSKKVPYHKHREAEEARKKREEDEAARVYAEFVESFKGDSSSGAK-FVRGGVIDPNAKLKIDSEGGKSKDGGSVPKKGSRYVPS 84
BLAST of HO062259 vs. TrEMBL
Match: B8AIW7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06097 PE=4 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.362e-16 Identity = 47/98 (47.96%), Postives = 59/98 (60.20%), Query Frame = 2 Query: 113 KGFFIDAKMSSFSITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDNAPGSKTFVRGGTINPNDKLKDDSEGEKSKDGVSGPKKGSRYAPA 406 +G + A + ++ KK PF +H +Y EFVESF+GD+ GSK FVRGG I+PN KL+ DSEG KSKDG S PKKGSRY P+ Sbjct: 15 RGCSLWAGKARIRMSSKKVPFHRHKENEEARKKREQDEAARVYEEFVESFKGDSTSGSK-FVRGGVIDPNAKLRIDSEGGKSKDGGSVPKKGSRYVPS 111
BLAST of HO062259 vs. TrEMBL
Match: Q6ETK6_ORYSJ (Putative U2-associated SR140 protein OS=Oryza sativa subsp. japonica GN=P0544B02.29-2 PE=4 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.426e-15 Identity = 45/85 (52.94%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 152 ITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDNAPGSKTFVRGGTINPNDKLKDDSEGEKSKDGVSGPKKGSRYAPA 406 ++ KK PF +H +Y EFVESF+GD+ GSK FVRGG I+PN KL+ DSEG KSKDG S PKKGSRY P+ Sbjct: 1 MSSKKVPFHRHKENEEARKKREQDEAARVYEEFVESFKGDSTSGSK-FVRGGVIDPNAKLRIDSEGGKSKDGGSVPKKGSRYVPS 84
BLAST of HO062259 vs. TAIR peptide
Match: AT5G25060.1 (| Symbols: | RNA recognition motif (RRM)-containing protein | chr5:8634219-8639984 REVERSE LENGTH=946) HSP 1 Score: 112.079 bits (279), Expect = 1.122e-25 Identity = 61/90 (67.78%), Postives = 63/90 (70.00%), Query Frame = 2 Query: 137 MSSFSITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDNAPGSKTFVRGGTINPNDKLKDDSEGEKSKDGVSGPKKGSRYAPA 406 MSSFSITRKKTPFQKH LY EFVESFQGDNA +KTFVRGGTINP DK K DSEGEKSKDG S KKGSRY P+ Sbjct: 1 MSSFSITRKKTPFQKHREEEEARKKKAEDETARLYQEFVESFQGDNAT-TKTFVRGGTINPGDKPKVDSEGEKSKDGGSVSKKGSRYVPS 89
BLAST of HO062259 vs. TAIR peptide
Match: AT5G10800.1 (| Symbols: | RNA recognition motif (RRM)-containing protein | chr5:3412898-3418382 REVERSE LENGTH=947) HSP 1 Score: 49.6766 bits (117), Expect = 7.286e-10 Identity = 25/34 (73.53%), Postives = 28/34 (82.35%), Query Frame = 2 Query: 308 TINPND-KLKDDSEGEKSKDGVSGPKKGSRYAPA 406 TINPND KLK DS+GEKS+DG S KKGSRY P+ Sbjct: 60 TINPNDNKLKPDSQGEKSRDGDSISKKGSRYVPS 93 HSP 2 Score: 29.6462 bits (65), Expect = 7.286e-10 Identity = 16/46 (34.78%), Postives = 25/46 (54.35%), Query Frame = 3 Query: 159 GKRRHFKSIEKXXXXXXXELKMRLLACMPNL*SRFKGITLLGRRLL 296 G++ ++ EK E +M+ L C+ + +RFKGI L R LL Sbjct: 12 GRKHRSRNTEKKKKPRRRERRMKQLVCIKSPWNRFKGIMLQLRLLL 57 The following BLAST results are available for this feature:
BLAST of HO062259 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of HO062259 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO062259 ID=HO062259; Name=HO062259; organism=Cicer arietinum; type=EST; length=420bpback to top |