DY475523

EST Overview
NameDY475523
Unique NameDY475523
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length255
Libraries
Library NameType
LIBEST_016683 Chickpea (ICC3996) post-inoculation EST librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
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BLAST of DY475523 vs. TrEMBL
Match: D7T4I4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_67.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032741001 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.516e-8
Identity = 27/35 (77.14%), Postives = 32/35 (91.43%), Query Frame = -1 
Query:  148 MLRGFVVNQAGYAEKMAAVWEKLAEETATYSRDSS 252
            ML+GFVVNQAGYAEKMA VWEK+AEET+ Y++D S
Sbjct:  191 MLKGFVVNQAGYAEKMANVWEKVAEETSGYAKDGS 225
[Close]
BLAST of DY475523 vs. TAIR peptide
Match: AT5G07120.1 (| Symbols: SNX2b | sorting nexin 2B | chr5:2207065-2209355 REVERSE LENGTH=572)

HSP 1 Score: 52.7582 bits (125), Expect = 5.288e-8
Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = -1 
Query:  148 MLRGFVVNQAGYAEKMAAVWEKLAEETATYSRDSS 252
            M++GFV NQ GYAEK+A VW K+AEET  Y R+SS
Sbjct:  538 MMKGFVANQVGYAEKIANVWTKVAEETRQYDRESS 572
[Close]
BLAST of DY475523 vs. TAIR peptide
Match: AT5G58440.1 (| Symbols: SNX2a | sorting nexin 2A | chr5:23624154-23626676 REVERSE LENGTH=587)

HSP 1 Score: 51.9878 bits (123), Expect = 9.020e-8
Identity = 22/33 (66.67%), Postives = 27/33 (81.82%), Query Frame = -1 
Query:  154 MLRGFVVNQAGYAEKMAAVWEKLAEETATYSRD 252
            M++GFVVNQ GYAEKM  VW K+AEET+ Y R+
Sbjct:  551 MMKGFVVNQVGYAEKMGNVWAKVAEETSQYDRE 583
The following BLAST results are available for this feature:
BLAST of DY475523 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
D7T4I4_VITVI8.516e-877.14Whole genome shotgun sequence of line PN40024, sca... [more]
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BLAST of DY475523 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G07120.15.288e-865.71| Symbols: SNX2b | sorting nexin 2B | chr5:2207065... [more]
AT5G58440.19.020e-866.67| Symbols: SNX2a | sorting nexin 2A | chr5:2362415... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DY475523 ID=DY475523; Name=DY475523; organism=Cicer arietinum; type=EST; length=255bp
GGATGNACAACTCTGGTTANTTAAANGTATGTTTGCCAAATGTTCANAGT
ATCTTTATACTACATATGATTAAAAACCTAATGGAATAAAAATCTAGAAA
GTAGCATAAAAGGATGAAAACAAAAATTTACAGCCAAGTACATTTTAGCT
GCTGTCTCTTGAGTATGTAGCTGTTTCTTCCGCAAGCTTCTCCCACACAG
CAGCCATTTTCTCTGCATANCCTGCCTGATTGACAACAAACCCTCGCAGC
ATGNT
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