GR395175
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR395175 vs. TrEMBL
Match: B9SLW5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1308620 PE=4 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.200e-19 Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1 Query: 180 DFAKNENVVKLWDSIGFGLGLDFDDYEDGVFSSKNDVVSKQHXXXXXXXXXXXXXXAGEGGR-------------GNLAVEIWDTRLRRRKPSVVAEWGPPVGT---VRVESGGVQKVYVTDNGRDGLTVGDMRKVSMPLGNVTEVDAYNTWWDADAVVVSDES*GEDGS 641 +F ++VVKLWD++GFG GL+ D+ S + ++K+ GNL +++WDTR+ R P ++AEW P +G + GGV KVYV D+ LTVGDMRKV PL N TE D +TWWDAD V V +E G S Sbjct: 164 EFRNGKSVVKLWDNLGFGFGLNLDNNSRNCVSLHD--INKELSLFSILGERSDIPAVSTSSSSPAVIVSSEANVAGNL-LKVWDTRVGCRIPEILAEWRPRLGKFVGISSGGGGVGKVYVRDDVTGRLTVGDMRKVKSPLVNATETDV-DTWWDADGVSVGEEDNGVGSS 329
BLAST of GR395175 vs. TrEMBL
Match: B9HWG9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_769638 PE=4 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.370e-18 Identity = 67/156 (42.95%), Postives = 83/156 (53.21%), Query Frame = -1 Query: 201 YFSLFDFAKNENVVKLWDSIGFGLGLDFDDYEDGVFSSKNDVVSKQHXXXXXXXXXXXXXXAGEGGRGNLAVEIWDTRLRRRKPSVVAEWGPPVGTVRVESGG----VQKVYVTDNGRDGLTVGDMRKVSMPLGNVTEVDAYNTWWDADAVVVSDE 656 +FSL DF NVVKLWD++G GLG + ++ D S++ VVS G AV R+ R P V AE P +G + SGG +KVYV D+ LTVGD+RKVS PL NVTE D +TWWDADAV+V DE Sbjct: 163 FFSLSDFTNERNVVKLWDNLGLGLGFNLNNGGD----SRSAVVS----FYDINNERNICSIFGSKCDSFTAVS---PRVGFRMPEVFAELRPMLGKIVGVSGGGGGGAKKVYVRDDVTGELTVGDIRKVSSPLVNVTESDV-DTWWDADAVIVEDE 306
BLAST of GR395175 vs. TrEMBL
Match: B9HJ39_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_832731 PE=4 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.509e-18 Identity = 60/153 (39.22%), Postives = 76/153 (49.67%), Query Frame = -1 Query: 201 YFSLFDFAKNENVVKLWDSIGFGLGLDFDDYEDGVFSSKNDVVSKQHXXXXXXXXXXXXXXAGEGGRGNLAVEIWDTRLRRRKPSVVAEWGPPVGT-VRVESGGVQKVYVTDNGRDGLTVGDMRKVSMPLGNVTEVDAYNTWWDADAVVVSDE 656 +FSL DF +NVVKLWD++G L G+ ++ +WDTR+ R P V AE P +G V V GGV+KVYV D+ LTVGDMRK S PL NVTE D +TWW+ DAV+V +E Sbjct: 163 FFSLTDFTNGKNVVKLWDNLGLKTNLS----------------------------------------GHSSLSLWDTRVGFRVPEVFAELRPTLGKIVGVVVGGVEKVYVRDDVTGELTVGDMRKPSSPLVNVTESDV-DTWWETDAVIVENE 274
BLAST of GR395175 vs. TrEMBL
Match: Q9M9C9_ARATH (At1g68440/T2E12_1 OS=Arabidopsis thaliana GN=At1g68440 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 1.284e-9 Identity = 47/143 (32.87%), Postives = 72/143 (50.35%), Query Frame = -1 Query: 213 NENVVKLWDSIGFGLGLDFDDYEDGVFSSKNDVVSKQHXXXXXXXXXXXXXXAGEGGRGNLAVEIWDTRLRRRKPSVVAEWGPPV----GTVRVESGGVQKVYVTDNGRDGLTVGDMRKVSMPLGNVTEVDAYNTWWDADAVV 629 + VVKLWD L +D DD+E+ V + + S + G + V+ D R R P+++AEW P + V++GGV+KVYV D+ + VGD+RK + L ++TE +A TWWDAD ++ Sbjct: 176 SSGVVKLWDH----LDIDGDDHENVVATFLKNYNSTSSPFFWAAE---------KKGVDAVKVKACDPRAGFRMPALLAEWRQPGRLLGNIIGVDTGGVEKVYVRDDVSGEIAVGDLRKFNGVLTDLTECEA-ETWWDADVLI 304
BLAST of GR395175 vs. TrEMBL
Match: Q9CA37_ARATH (Putative uncharacterized protein T26J14.1 (Fragment) OS=Arabidopsis thaliana GN=T26J14.1 PE=4 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 5.393e-8 Identity = 33/81 (40.74%), Postives = 50/81 (61.73%), Query Frame = -1 Query: 213 VEIWDTRLRRRKPSVVAEWGPPV----GTVRVESGGVQKVYVTDNGRDGLTVGDMRKVSMPLGNVTEVDAYNTWWDADAVV 443 V+ D R R P+++AEW P + V++GGV+KVYV D+ + VGD+RK + L ++TE +A TWWDAD ++ Sbjct: 23 VKACDPRAGFRMPALLAEWRQPGRLLGNIIGVDTGGVEKVYVRDDVSGEIAVGDLRKFNGVLTDLTECEA-ETWWDADVLI 102
BLAST of GR395175 vs. TrEMBL
Match: D7KWC1_ARALY (Putative uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475964 PE=4 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 1.569e-7 Identity = 44/139 (31.65%), Postives = 69/139 (49.64%), Query Frame = -1 Query: 225 NENVVKLWDSIGFGLGLDFDDYEDGVFSSKNDVVSKQHXXXXXXXXXXXXXXAGEGGRGNLAVEIWDTRLRRRKPSVVAEWGPPV----GTVRVESGGVQKVYVTDNGRDGLTVGDMRKVSMPLGNVTEVDAYNTWWDA 629 + VVKLWD + + D DD+E+ V + + S + G + V+ D R + P+++AEW P + V++GGV+KVYV D+ + VGD+RK + L ++TE +A TWWDA Sbjct: 176 SSGVVKLWDHLD--IDGDDDDHENVVATFLKNCSSTSSLFLAAE----------KKGVDAVKVKACDPRAGFKMPALLAEWRQPGRLLGNIIGVDAGGVEKVYVRDDVSGEIAVGDLRKFNGVLTDLTESEA-ETWWDA 301
BLAST of GR395175 vs. TAIR peptide
Match: AT1G68440.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G25400.2); Has 86 Blast hits to 86 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 27; Fungi - 11; Plants - 24; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). | chr1:25658115-25659035 FORWARD LENGTH=306) HSP 1 Score: 67.3958 bits (163), Expect = 8.727e-12 Identity = 47/143 (32.87%), Postives = 72/143 (50.35%), Query Frame = -1 Query: 213 NENVVKLWDSIGFGLGLDFDDYEDGVFSSKNDVVSKQHXXXXXXXXXXXXXXAGEGGRGNLAVEIWDTRLRRRKPSVVAEWGPPV----GTVRVESGGVQKVYVTDNGRDGLTVGDMRKVSMPLGNVTEVDAYNTWWDADAVV 629 + VVKLWD L +D DD+E+ V + + S + G + V+ D R R P+++AEW P + V++GGV+KVYV D+ + VGD+RK + L ++TE +A TWWDAD ++ Sbjct: 176 SSGVVKLWDH----LDIDGDDHENVVATFLKNYNSTSSPFFWAAE---------KKGVDAVKVKACDPRAGFRMPALLAEWRQPGRLLGNIIGVDTGGVEKVYVRDDVSGEIAVGDLRKFNGVLTDLTECEA-ETWWDADVLI 304
BLAST of GR395175 vs. TAIR peptide
Match: AT1G25400.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68440.1). | chr1:8911463-8912329 REVERSE LENGTH=288) HSP 1 Score: 52.373 bits (124), Expect = 2.905e-7 Identity = 43/132 (32.58%), Postives = 63/132 (47.73%), Query Frame = -1 Query: 255 NENVVKLWDSIGF-GLGLDFDDY--EDGVFSSKNDVVSKQHXXXXXXXXXXXXXXAGEGGRGNLAVEIWDTRLRRRKPSVVAEWGPP---VGTV-RVESGGVQKVYVTDNGRDGLTVGDMRKVSMPLGNVTE 629 + VVKLWD++ F G G + + G +S + V A + G L V WD R+ P+++AEW P +G + RV+ G V K+YV D+ +TVGDMR V+ L +TE Sbjct: 158 SSGVVKLWDNLDFNGEGSPVASFFSKCGSYSLLSSAV---------------LLAAEKKGSDGLEVSAWDARVGFGVPALLAEWKQPGRLLGKIIRVDVGDVDKIYVGDDVEGEITVGDMRMVNGALTELTE 274
BLAST of GR395175 vs. TAIR peptide
Match: AT1G25400.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68440.1); Has 21 Blast hits to 21 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:8911463-8912329 REVERSE LENGTH=288) HSP 1 Score: 52.373 bits (124), Expect = 2.905e-7 Identity = 43/132 (32.58%), Postives = 63/132 (47.73%), Query Frame = -1 Query: 255 NENVVKLWDSIGF-GLGLDFDDY--EDGVFSSKNDVVSKQHXXXXXXXXXXXXXXAGEGGRGNLAVEIWDTRLRRRKPSVVAEWGPP---VGTV-RVESGGVQKVYVTDNGRDGLTVGDMRKVSMPLGNVTE 629 + VVKLWD++ F G G + + G +S + V A + G L V WD R+ P+++AEW P +G + RV+ G V K+YV D+ +TVGDMR V+ L +TE Sbjct: 158 SSGVVKLWDNLDFNGEGSPVASFFSKCGSYSLLSSAV---------------LLAAEKKGSDGLEVSAWDARVGFGVPALLAEWKQPGRLLGKIIRVDVGDVDKIYVGDDVEGEITVGDMRMVNGALTELTE 274 The following BLAST results are available for this feature:
BLAST of GR395175 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 6
BLAST of GR395175 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR395175 ID=GR395175; Name=GR395175; organism=Cicer arietinum; type=EST; length=707bpback to top |